Gene Details:
- Gene ID: CsaV3_3G015190
- Gene Symbol: SH3.1|PhyB
- Gene Name: Phytochrome B
- Genome: Cucurbit Genomics Database
- Species: Cucumis sativus
Functional Descriptions:
- Two QTLs of hypocotyl elongation under low light, SH3.1|PhyB and SH6.1, were fine-mapped using introgression lines (donor parent, XIS49; recurrent parent, CL).
- SH3.1|PhyB encodes a red-light receptor Phytochrome B (SH3.1|PhyB, CsaV3_3G015190). A~4kb region with large deletion and highly divergent regions (HDRs) were identified in the promoter of the SH3.1|PhyB gene in XIS49.
- Loss of function of this SH3.1|PhyB caused a super-long hypocotyl phenotype.
- The proteins encoded by two genes SH3.1|PhyB and FRIGIDA-ESSENTIAL LIKE (FEL) were determined to control hypocotyl elongation in XIS cucumber, and both genes are affected by SVs.
Function-related keywords:
Literature:
- A nanopore-based cucumber genome assembly reveals structural variations at two QTLs controlling hypocotyl elongation. DOI: 10.1093/plphys/kiae153 ; PMID: 38478469
Related News:
Gene Resources:
Orthologs:
Sequences:
- CDS Sequence:
- Protein Sequence: