Gene Details:
- Gene ID: CsaV3_6G050300
- Gene Symbol: SH6.1|FEL
- Gene Name: FRIGIDA-ESSENTIAL LIKE
- Genome: Cucurbit Genomics Database
- Species: Cucumis sativus
Functional Descriptions:
- Two QTLs of hypocotyl elongation under low light, SH3.1 and SH6.1|FEL, were fine-mapped using introgression lines (donor parent, XIS49; recurrent parent, CL).
- SH6.1|FEL encodes a CCCH-type zinc finger protein FRIGIDA-ESSENTIAL LIKE (SH6.1|FEL, CsaV3_6G050300). SH6.1|FEL negatively regulated hypocotyl elongation but it was transcriptionally suppressed by long terminal repeats retrotransposon insertion in CL cucumber.
- SH6.1|FEL physically binds to the promoter of CONSTITUTIVE PHOTOMORPHOGENIC 1a (COP1a), regulating the expression of COP1a and the downstream hypocotyl elongation.
- The proteins encoded by two genes PhyB and FRIGIDA-ESSENTIAL LIKE (SH6.1|FEL) were determined to control hypocotyl elongation in XIS cucumber, and both genes are affected by SVs.
Function-related keywords:
Literature:
- A nanopore-based cucumber genome assembly reveals structural variations at two QTLs controlling hypocotyl elongation. DOI: 10.1093/plphys/kiae153 ; PMID: 38478469
Related News:
Gene Resources:
Orthologs:
Sequences:
- CDS Sequence:
- Protein Sequence: