Gene Details:

• Gene ID: AT1G03475
• Gene Symbol: ATCPO-I, HEMF1, LIN2
• Gene Name: LESION INITIATION 2
• Description: Coproporphyrinogen III oxidase;(source:Araport11)
• TAIR Accession: locus:2825062
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT1G03475.1

Plant Ontology Annotations:

• PO:0000013  — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
• PO:0000230  — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
• PO:0009010  — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
• PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
• PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
• PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0015995  — involved in — chlorophyll biosynthetic process
• GO:0009570  — located in — chloroplast stroma
• GO:0048046  — located in — apoplast
• GO:0006782  — involved in — protoporphyrinogen IX biosynthetic process
• GO:0005576  — located in — extracellular region
• GO:0004109  — enables — coproporphyrinogen oxidase activity
• GO:0033014  — acts upstream of or within — tetrapyrrole biosynthetic process
• GO:0009536  — located in — plastid
• GO:0042803  — enables — protein homodimerization activity
• GO:0005737  — is active in — cytoplasm
• GO:0009507  — located in — chloroplast

Germplasm Phenotype:

• lin2  — Plant have pale green leaves and develop lesions on the young leaves. Lesions begin as a small spot or stripe of collapsed tissue usually appearing in the middle part of the young leaves.

Function-related keywords:

• cauline leaf ,  inflorescence meristem ,  seed ,  carpel ,  petal ,  stem ,  pollen ,  guard cell

Literature:

• UBIQUITIN-SPECIFIC PROTEASES function in plant development and stress responses.   DOI:  10.1007/s11103-017-0633-5 ;  PMID:  28695315
• Automated identification of putative methyltransferases from genomic open reading frames.   DOI:  10.1074/mcp.M300037-MCP200 ;  PMID:  12872006
• Regulation of flowering time by the protein arginine methyltransferase AtPRMT10.   DOI:  10.1038/sj.embor.7401111 ;  PMID:  18007657
• Redundant requirement for a pair of PROTEIN ARGININE METHYLTRANSFERASE4 homologs for the proper regulation of Arabidopsis flowering time.   DOI:  10.1104/pp.108.124727 ;  PMID:  18660432
• Crystal structure of the plant epigenetic protein arginine methyltransferase 10.   DOI:  10.1016/j.jmb.2011.09.040 ;  PMID:  21986201
• The enzymatic activity of Arabidopsis protein arginine methyltransferase 10 is essential for flowering time regulation.   DOI:  10.1007/s13238-012-2935-3 ;  PMID:  22729397
• Promoter-based integration in plant defense regulation.   DOI:  10.1104/pp.114.248716 ;  PMID:  25352272
• The ARID-HMG DNA-binding protein AtHMGB15 is required for pollen tube growth in Arabidopsis thaliana.   DOI:  10.1111/tpj.12582 ;  PMID:  24923357
• Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.   DOI:  10.1105/tpc.17.00805 ;  PMID:  29317470
• Myosin-driven transport network in plants.   DOI:  10.1073/pnas.1620577114 ;  PMID:  28096376
• The pleiotropic Arabidopsis frd mutation with altered coordination of chloroplast biogenesis, cell size and differentiation, organ size and number.   DOI:  10.1016/j.gene.2006.06.019 ;  PMID:  16973304
• Identification of putative rhamnogalacturonan-II specific glycosyltransferases in Arabidopsis using a combination of bioinformatics approaches.   DOI:  10.1371/journal.pone.0051129 ;  PMID:  23272088
• Stable isotope labeling of phosphopeptides for multiparallel kinase target analysis and identification of phosphorylation sites.   DOI:  10.1002/rcm.1093 ;  PMID:  12845583
• An integrated strategy for identification and relative quantification of site-specific protein phosphorylation using liquid chromatography coupled to MS2/MS3.   DOI:  10.1002/rcm.2236 ;  PMID:  16287031
• A spatiotemporal analysis of enzymatic activities associated with carbon metabolism in wild-type and mutant embryos of Arabidopsis using in situ histochemistry.   DOI:  10.1111/j.1365-313X.2006.02682.x ;  PMID:  16553903
• Phylogenetic and expression analysis of sucrose phosphate synthase isozymes in plants.   DOI:  10.1016/j.jplph.2006.04.014 ;  PMID:  16876912
• CELLULOSE SYNTHASE9 serves a nonredundant role in secondary cell wall synthesis in Arabidopsis epidermal testa cells.   DOI:  10.1104/pp.110.154062 ;  PMID:  20335403
• Decrease in leaf sucrose synthesis leads to increased leaf starch turnover and decreased RuBP regeneration-limited photosynthesis but not Rubisco-limited photosynthesis in Arabidopsis null mutants of SPSA1.   DOI:  10.1111/j.1365-3040.2010.02265.x ;  PMID:  21309792
• Loss of the two major leaf isoforms of sucrose-phosphate synthase in Arabidopsis thaliana limits sucrose synthesis and nocturnal starch degradation but does not alter carbon partitioning during photosynthesis.   DOI:  10.1093/jxb/eru282 ;  PMID:  24994761

Sequence: