Gene Details:
- Gene ID: AT2G26060
- Gene Symbol: CIA1, emb1345
- Gene Name: Cytosolic Iron-sulfur protein Assembly 1, embryo defective 1345
- Description: Transducin/WD40 repeat-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2057381
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0016226 — acts upstream of or within — iron-sulfur cluster assembly
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0097361 — part of — CIA complex
- GO:0016226 — involved in — iron-sulfur cluster assembly
Function-related keywords:
- shoot system , plant embryo , stamen , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- Genome analysis of Chlamydomonas reinhardtii reveals the existence of multiple, compartmentalized iron-sulfur protein assembly machineries of different evolutionary origins. DOI: 10.1534/genetics.107.086033 ; PMID: 18493040
- The DUF59 family gene AE7 acts in the cytosolic iron-sulfur cluster assembly pathway to maintain nuclear genome integrity in Arabidopsis. DOI: 10.1105/tpc.112.102608 ; PMID: 23104832
- Glutaredoxin GRXS17 Associates with the Cytosolic Iron-Sulfur Cluster Assembly Pathway. DOI: 10.1104/pp.16.00261 ; PMID: 27503603
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequence:
cDNA Sequence
- >AT2G26060.1 CAAACCCAGACCCAAACCCATGCCCATACACAAATCACGAATGCCTAGGCTTACTTGTGACCGAAACCGAATTGAATCATATATAGTTTCAGGTCACCTGTTGCACAATCTCTGCTCAGCCCTAAAAGCTTACTCCTTTCAACTTTCTGGAGGCCTTCTCGTAGCCTAGCGTCATAGATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGCCACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTTTCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCTCTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGGTCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACTGGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTATTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAGTATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAGATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCATCTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGACGACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACATGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAATGATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGTGATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGACTGCTGTTGGTTTGGATAGGTTCTGAAACTCCTGTGTTGTTTTACTTTTTCTGAGGTCTATCTGTAAACAACATAACATTTTAGGTAGAAGAGAACTCTATACTATTTTGTCATACAAGATTAGCTCCATGATGTTTCATACGATTTCTGTTTTACTTTTACTACGATCACTTAAGTTTTAACACTGTTGGTACAACTTTGTGGAATTTAATAAACAACTTTTTGACGAAACAAAAA
- >AT2G26060.2 CAAACCCAGACCCAAACCCATGCCCATACACAAATCACGAATGCCTAGGCTTACTTGTGACCGAAACCGAATTGAATCATATATAGTTTCAGGTCACCTGTTGCACAATCTCTGCTCAGCCCTAAAAGCTTACTCCTTTCAACTTTCTGGAGGCCTTCTCGTAGCCTAGCGTCATAGATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGCCACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTTTCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCTCTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGGTCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACTGGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTATTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAGTATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAGATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCATCTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGACGACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACATGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAATGATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGTGATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGACTGCTGTTGGTTTGGATAGGTTCTGAAACTCCTGTGTTGTTTTACTTTTTCTGAGGTCTATCTGTAAACAACATAACATTTTAGGTAGAAGAGAACTCTATACTATTTTGTCATACAAGATTAGCTCCATGATGTTTCATACGATTTCTGTTTTACTTTTACTACGATCACTTAAGTTTTAACACTGTTGGTACAACTTTGTGGAATTTAATAAACAACTTTTTGACGAAACAAAAA
CDS Sequence
- >AT2G26060.1 ATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGCCACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTTTCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCTCTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGGTCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACTGGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTATTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAGTATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAGATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCATCTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGACGACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACATGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAATGATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGTGATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGA
- >AT2G26060.2 ATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGCCACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTTTCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCTCTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGGTCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACTGGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTATTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAGTATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAGATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCATCTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGACGACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACATGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAATGATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGTGATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGA
Protein Sequence
- >AT2G26060.1 MDLMEKNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLATKP
- >AT2G26060.2 MDLMEKNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLATKP