Gene Details:
- Gene ID: AT2G29525
- Gene Symbol: AtIPCS3
- Gene Name: Arabidopsis Inositol phosphorylceramide synthase 3
- Description: Inositol phosphorylceramide synthase 3;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Literature:
- An inositolphosphorylceramide synthase is involved in regulation of plant programmed cell death associated with defense in Arabidopsis. DOI: 10.1105/tpc.108.060053 ; PMID: 19001565
- Functional analyses of differentially expressed isoforms of the Arabidopsis inositol phosphorylceramide synthase. DOI: 10.1007/s11103-010-9626-3 ; PMID: 20309609
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
Sequence:
cDNA Sequence
- >AT2G29525.4 TTGAATCGGTTCCTTCAAAATTATTGATTTGGGAATATATTCTTGTCAATTCAGGTGAATCAAACTGGTCGGTGCAATTCAAGATTGCCCTCGTATTTGTGTCGGGGAATGAAACTGTTCTGTCTTTCTTACAAAAGCAGTTGCATTTGATCTTGCTGCAGAGATTAATGTTCATTCTCAATCTTAACCATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
- >AT2G29525.1 TTGAATCGGTTCCTTCAAAATTATTGATTTGGGAATATATTCTTGTCAATTCAGGTGAATCAAACTGGTCGGTGCAATTCAAGATTGCCCTCGTATTTGTGTCGGGGAATGAAACTGTTCTGTCTTTCTTACAAAAGCAGTTGCATTTGATCTTGCTGCAGAGATTAATGTTCATTCTCAATCTTAACCATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
- >AT2G29525.2 TTGAATCGGTTCCTTCAAAATTATTGATTTGGGAATATATTCTTGTCAATTCAGGTGAATCAAACTGGTCGGTGCAATTCAAGATTGCCCTCGTATTTGTGTCGGGGAATGAAACTGTTCTGTCTTTCTTACAAAAGCAGTTGCATTTGATCTTGCTGCAGAGATTAATGTTCATTCTCAATCTTAACCATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
- >AT2G29525.3 TTGAATCGGTTCCTTCAAAATTATTGATTTGGGAATATATTCTTGTCAATTCAGGTGAATCAAACTGGTCGGTGCAATTCAAGATTGCCCTCGTATTTGTGTCGGGGAATGAAACTGTTCTGTCTTTCTTACAAAAGCAGTTGCATTTGATCTTGCTGCAGAGATTAATGTTCATTCTCAATCTTAACCATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
- >AT2G29525.5 TTGAATCGGTTCCTTCAAAATTATTGATTTGGGAATATATTCTTGTCAATTCAGGTGAATCAAACTGGTCGGTGCAATTCAAGATTGCCCTCGTATTTGTGTCGGGGAATGAAACTGTTCTGTCTTTCTTACAAAAGCAGTTGCATTTGATCTTGCTGCAGAGATTAATGTTCATTCTCAATCTTAACCATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
CDS Sequence
- >AT2G29525.4 ATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
- >AT2G29525.1 ATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
- >AT2G29525.2 ATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
- >AT2G29525.3 ATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
- >AT2G29525.5 ATGCCGGTTTACGTTGATCGCGAAGCTCCTAAGCTATGGAGACGAATTTACTCAGAAGCGACATTAGAAGCTTCTCTTCTTGCTGAAAAATGGAAGCTTGTTCTTGCTGGACTTGTATTTCAGTACATTCATGGACTTGCTGCTCATGGAGTTCACTACTTACACCGACCTGGTCCTACTCTTCAAGATGCTGGTTTCTTTATTCTTCCAGCACTTGGGCAAGATAAAGCATTTTTCAGTGAAACTGTGTTTGTCACTATCTTTGGATCATTTATCTTGTGGACATTTCATCCTTTTGTTTCCCACAGTAAAAAGATTTGTACAGTTTTGATATGGTGCAGAGTTTTTGTTTATTTAGCTGCTTCTCAAAGTCTGAGGATCATAACATTCTTTGCAACACAGCTTCCTGGGCCGAATTATCATTGTCGAGAAGGCTCCAAGCTCGCCAAGATTCCACCTCCAAAGAATGTTCTTGAAGTACTCTTGATTAACTTTCCTGATGGAGTTATATATGGTTGTGGAGATCTGATATTTTCATCACATACGATATTCACCTTAGTCTTTGTACGCACATATCAAAGATACGGCACACGAAGGTGGATCAAGCACTTGGCTTGGCTTATGGCAGTAATACAGAGCATATTGATTATAGCATCAAGGAAACATTACACAGTTGACATTGTTGTTGCATGGTATACTGTGAACCTTGTAATGTTCTACGTTGACAGTAAACTGCCAGAAATGGCAGAACGTTCTAGTGGACCTTCTCCTACGCCTTTACTTCCACTGAGCACAAAGGACAGTAAGAACAAGAGCAAAGAAGATCATCAGAGACTTCTAAACGAGAACAATGTAGCAGATGATCATTGA
Protein Sequence
- >AT2G29525.4 MPVYVDREAPKLWRRIYSEATLEASLLAEKWKLVLAGLVFQYIHGLAAHGVHYLHRPGPTLQDAGFFILPALGQDKAFFSETVFVTIFGSFILWTFHPFVSHSKKICTVLIWCRVFVYLAASQSLRIITFFATQLPGPNYHCREGSKLAKIPPPKNVLEVLLINFPDGVIYGCGDLIFSSHTIFTLVFVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWYTVNLVMFYVDSKLPEMAERSSGPSPTPLLPLSTKDSKNKSKEDHQRLLNENNVADDH
- >AT2G29525.1 MPVYVDREAPKLWRRIYSEATLEASLLAEKWKLVLAGLVFQYIHGLAAHGVHYLHRPGPTLQDAGFFILPALGQDKAFFSETVFVTIFGSFILWTFHPFVSHSKKICTVLIWCRVFVYLAASQSLRIITFFATQLPGPNYHCREGSKLAKIPPPKNVLEVLLINFPDGVIYGCGDLIFSSHTIFTLVFVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWYTVNLVMFYVDSKLPEMAERSSGPSPTPLLPLSTKDSKNKSKEDHQRLLNENNVADDH
- >AT2G29525.2 MPVYVDREAPKLWRRIYSEATLEASLLAEKWKLVLAGLVFQYIHGLAAHGVHYLHRPGPTLQDAGFFILPALGQDKAFFSETVFVTIFGSFILWTFHPFVSHSKKICTVLIWCRVFVYLAASQSLRIITFFATQLPGPNYHCREGSKLAKIPPPKNVLEVLLINFPDGVIYGCGDLIFSSHTIFTLVFVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWYTVNLVMFYVDSKLPEMAERSSGPSPTPLLPLSTKDSKNKSKEDHQRLLNENNVADDH
- >AT2G29525.3 MPVYVDREAPKLWRRIYSEATLEASLLAEKWKLVLAGLVFQYIHGLAAHGVHYLHRPGPTLQDAGFFILPALGQDKAFFSETVFVTIFGSFILWTFHPFVSHSKKICTVLIWCRVFVYLAASQSLRIITFFATQLPGPNYHCREGSKLAKIPPPKNVLEVLLINFPDGVIYGCGDLIFSSHTIFTLVFVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWYTVNLVMFYVDSKLPEMAERSSGPSPTPLLPLSTKDSKNKSKEDHQRLLNENNVADDH
- >AT2G29525.5 MPVYVDREAPKLWRRIYSEATLEASLLAEKWKLVLAGLVFQYIHGLAAHGVHYLHRPGPTLQDAGFFILPALGQDKAFFSETVFVTIFGSFILWTFHPFVSHSKKICTVLIWCRVFVYLAASQSLRIITFFATQLPGPNYHCREGSKLAKIPPPKNVLEVLLINFPDGVIYGCGDLIFSSHTIFTLVFVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWYTVNLVMFYVDSKLPEMAERSSGPSPTPLLPLSTKDSKNKSKEDHQRLLNENNVADDH