Gene Details:
- Gene ID: AT2G30880
- Gene Symbol: AtSWAP70, SWAP70
- Gene Name:
- Description: Pleckstrin homology (PH) domain-containing protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Germplasm Phenotype:
- SALK_087428c — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:decreased,osmotic stress:decreased,salt stress:no change,ABA:no change,hypoxia:no change.
- SALK_143125C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
Literature:
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Learning the lipid language of plant signalling. DOI: 10.1016/j.tplants.2004.06.008 ; PMID: 15358268
- Putative Arabidopsis homologues of metazoan coiled-coil cytoskeletal proteins. DOI: 10.1042/CBI20100719 ; PMID: 21284606
- Function of Arabidopsis SWAP70 GEF in immune response. DOI: 10.4161/psb.19562 ; PMID: 22499172
- Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. DOI: 10.1111/ppl.12013 ; PMID: 23517122
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
Sequence:
cDNA Sequence
- >AT2G30880.1 AACCATAAAAATGAAGTGAACAAACAAAAAGTGAGAAACTCAAGAACCGGTTCATTTGACGAGTAAGCTGATCCAGTATCGTACCGACCGGTTAAGTTGATTTGATCGCGTTGAAAGAGTGAAGACAGATTCAACTGCAATTCCGCGAAACCAAACCTAACAGCATTTTTCTCCAATTCCTTCTTCTTCTTCTTCTTCTTCTGTAACCTCGTCTTCTTCAGCTTATACTCATAGCTATACCAAAGAAAACCTCTTAAAACCCTTCTTCTCTCGATCCATCGATCAGCAACAATTCACTTCTAATCGATCAAGAGCTTTCCGATCTCGTCGATCCCAATTAACATGGCTTCCAACGGCGCTTCTCCGAGAATTGTTGATGCTACTGAGAACAGCTTGGATAAGATCAAGCGACAATTGGCATCTGGCTCTGGTCGGAACTTGCTACAAGGACCTCTTTTCAAGCGATCTGAAACTCTGAGAAAATGGAACGAACGATGGGTGATACTTGATCCAACAACAGGGAAAATGGAGTATAAGACGAGGCGAAATGAGCCAACTATCAAGGGAACAATTTTGTTTGACGAAAATAGCACAATCTCCATCTCTCCTGTCAACTTCCAGGGGCTTCCAAAATATAATGGTTGCTGTATTTATATTGGTACCCCACAGAAGAAAGATTACTTTTTGTGTGCAGAGACTCCTGGTGCAGCTAAAGCTTGGGTCACAACCTTACATGCGACACAGCTAGTTCTAAAGGCCCATAAGGAGGCTGTCGAATCTCTAAGTGGAAGTGGTTCTGCAACACTTGGTACCGTTGCAACCGTTGTTGCCGCTGCCAATTCAACAGCATTGGAATGTTCCAGAGAAATTCAAGCAGCAATGCAGATCTCTTTGAGGAATGCATTGAAAATAACGCCAAATAAACCGATTGATGGACCACTAGATGATTTGACAATAATGAAGGAAACTCTGCGTGTCAAAGATGAAGAATTACATAATTTAGCCAGGGAACTTCGTTCTCGTGACTCAATGATAAAGGAAATAGCAGATAAGCTATCTGAGACTGCTGAAGCAGCTGTAGCTGCAGCATCTGCTGCTCATACAATGGATGAACAAAGGAAAATCGTTTGTGTGGAATTTGAGCGCTTGACTACAGACTCACAGAGACAGCAAGAAGCCACAAAATTAAAGCTCAAGGAATTGGAAGAGAAGACCTTTACTTTGAGTAAGGAAAAAGATCAATTGGTTAAGGAAAGAGACGCTGCTCTCCAAGAGGCACATATGTGGCGGTCTGAGCTTGGGAAAGCCAGAGAGCGTGTTGTCATACTTGAAGGAGCTGTTGTGAGGGCCGAAGAGAAAGTGAGGGTTGCAGAAGCAAGCGGTGAAGCAAAATCAAAAGAGGCTTCTCAGAGAGAAGCAACTGCTTGGACAGAGAAGCAAGAGCTTTTAGCATATGTGAATATGTTACAAACTCAGCTTCAAAGGCAGCAACTAGAGACAAAGCAAGTGTGTGAGGAGAAGACTGAGTCTACTAACGGCGAAGCTTCTCTTCCAATGACAAAGGAAACAGAAAAGAATGTGGATAAAGCATGTCTGAGCATTTCAAGAACAGCCTCTATACCGGGAGAGAATGTAGTCCATATGAGTGAAGAGCAGGTAGTAAACGCTCAGCCTCCGGTGGGAGAAAACGAATGGAATGATATTCAGGCAACAGAGGCAAGAGTTTCTGATGTAAGAGAAATATCTGCAGAGACTGAACGGGACAGAAGAAACAGCTTGGATATCCCGGTAGTGTCTCCTGAACCTAACGTTCCACGCAATGATCCGCCTTCCGAATCATTTCATCACCAGCCTTGAATAAAGATTGGTAGATCTTCGTACATTTTAATATACTCTTTGATGGTCTGGTAATGTTTGGAGAGTTGATTCTTCTAACAACAAAAAGAATTTGTCTTTTTAGTTTTCTTGTACATTCAAGAGTTGTTATGTATCTGCCGCTCTTGAATTTGTCTGACTAGGGAATGATTCTTTTTCCCTTTTATTACAACATGAAGAACAGAGAGATATGTGTTAAACTTTGACTTATGTTTTTGGATTCATATAAACCAGTTTTCATAT
- >AT2G30880.2 AACCATAAAAATGAAGTGAACAAACAAAAAGTGAGAAACTCAAGAACCGGTTCATTTGACGAGTAAGCTGATCCAGTATCGTACCGACCGGTTAAGTTGATTTGATCGCGTTGAAAGAGTGAAGACAGATTCAACTGCAATTCCGCGAAACCAAACCTAACAGCATTTTTCTCCAATTCCTTCTTCTTCTTCTTCTTCTTCTGTAACCTCGTCTTCTTCAGCTTATACTCATAGCTATACCAAAGAAAACCTCTTAAAACCCTTCTTCTCTCGATCCATCGATCAGCAACAATTCACTTCTAATCGATCAAGAGCTTTCCGATCTCGTCGATCCCAATTAACATGGCTTCCAACGGCGCTTCTCCGAGAATTGTTGATGCTACTGAGAACAGCTTGGATAAGATCAAGCGACAATTGGCATCTGGCTCTGGTCGGAACTTGCTACAAGGACCTCTTTTCAAGCGATCTGAAACTCTGAGAAAATGGAACGAACGATGGGTGATACTTGATCCAACAACAGGGAAAATGGAGTATAAGACGAGGCGAAATGAGCCAACTATCAAGGGAACAATTTTGTTTGACGAAAATAGCACAATCTCCATCTCTCCTGTCAACTTCCAGGGGCTTCCAAAATATAATGGTTGCTGTATTTATATTGGTACCCCACAGAAGAAAGATTACTTTTTGTGTGCAGAGACTCCTGGTGCAGCTAAAGCTTGGGTCACAACCTTACATGCGACACAGCTAGTTCTAAAGGCCCATAAGGAGGCTGTCGAATCTCTAAGTGGAAGTGGTTCTGCAACACTTGGTACCGTTGCAACCGTTGTTGCCGCTGCCAATTCAACAGCATTGGAATGTTCCAGAGAAATTCAAGCAGCAATGCAGATCTCTTTGAGGAATGCATTGAAAATAACGCCAAATAAACCGATTGATGGACCACTAGATGATTTGACAATAATGAAGGAAACTCTGCGTGTCAAAGATGAAGAATTACATAATTTAGCCAGGGAACTTCGTTCTCGTGACTCAATGATAAAGGAAATAGCAGATAAGCTATCTGAGACTGCTGAAGCAGCTGTAGCTGCAGCATCTGCTGCTCATACAATGGATGAACAAAGGAAAATCGTTTGTGTGGAATTTGAGCGCTTGACTACAGACTCACAGAGACAGCAAGAAGCCACAAAATTAAAGCTCAAGGAATTGGAAGAGAAGACCTTTACTTTGAGTAAGGAAAAAGATCAATTGGTTAAGGAAAGAGACGCTGCTCTCCAAGAGGCACATATGTGGCGGTCTGAGCTTGGGAAAGCCAGAGAGCGTGTTGTCATACTTGAAGGAGCTGTTGTGAGGGCCGAAGAGAAAGTGAGGGTTGCAGAAGCAAGCGGTGAAGCAAAATCAAAAGAGGCTTCTCAGAGAGAAGCAACTGCTTGGACAGAGAAGCAAGAGCTTTTAGCATATGTGAATATGTTACAAACTCAGCTTCAAAGGCAGCAACTAGAGACAAAGCAAGTGTGTGAGGAGAAGACTGAGTCTACTAACGGCGAAGCTTCTCTTCCAATGACAAAGGAAACAGAAAAGAATGTGGATAAAGCATGTCTGAGCATTTCAAGAACAGCCTCTATACCGGGAGAGAATGTAGTCCATATGAGTGAAGAGCAGGTAGTAAACGCTCAGCCTCCGGTGGGAGAAAACGAATGGAATGATATTCAGGCAACAGAGGCAAGAGTTTCTGATGTAAGAGAAATATCTGCAGAGACTGAACGGGACAGAAGAAACAGCTTGGATATCCCGGTAGTGTCTCCTGAACCTAACGTTCCACGCAATGATCCGCCTTCCGAATCATTTCATCACCAGCCTTGAATAAAGATTGGTAGATCTTCGTACATTTTAATATACTCTTTGATGGTCTGGTAATGTTTGGAGAGTTGATTCTTCTAACAACAAAAAGAATTTGTCTTTTTAGTTTTCTTGTACATTCAAGAGTTGTTATGTATCTGCCGCTCTTGAATTTGTCTGACTAGGGAATGATTCTTTTTCCCTTTTATTACAACATGAAGAACAGAGAGATATGTGTTAAACTTTGACTTATGTTTTTGGATTCATATAAACCAGTTTTCATAT
CDS Sequence
- >AT2G30880.1 ATGGCTTCCAACGGCGCTTCTCCGAGAATTGTTGATGCTACTGAGAACAGCTTGGATAAGATCAAGCGACAATTGGCATCTGGCTCTGGTCGGAACTTGCTACAAGGACCTCTTTTCAAGCGATCTGAAACTCTGAGAAAATGGAACGAACGATGGGTGATACTTGATCCAACAACAGGGAAAATGGAGTATAAGACGAGGCGAAATGAGCCAACTATCAAGGGAACAATTTTGTTTGACGAAAATAGCACAATCTCCATCTCTCCTGTCAACTTCCAGGGGCTTCCAAAATATAATGGTTGCTGTATTTATATTGGTACCCCACAGAAGAAAGATTACTTTTTGTGTGCAGAGACTCCTGGTGCAGCTAAAGCTTGGGTCACAACCTTACATGCGACACAGCTAGTTCTAAAGGCCCATAAGGAGGCTGTCGAATCTCTAAGTGGAAGTGGTTCTGCAACACTTGGTACCGTTGCAACCGTTGTTGCCGCTGCCAATTCAACAGCATTGGAATGTTCCAGAGAAATTCAAGCAGCAATGCAGATCTCTTTGAGGAATGCATTGAAAATAACGCCAAATAAACCGATTGATGGACCACTAGATGATTTGACAATAATGAAGGAAACTCTGCGTGTCAAAGATGAAGAATTACATAATTTAGCCAGGGAACTTCGTTCTCGTGACTCAATGATAAAGGAAATAGCAGATAAGCTATCTGAGACTGCTGAAGCAGCTGTAGCTGCAGCATCTGCTGCTCATACAATGGATGAACAAAGGAAAATCGTTTGTGTGGAATTTGAGCGCTTGACTACAGACTCACAGAGACAGCAAGAAGCCACAAAATTAAAGCTCAAGGAATTGGAAGAGAAGACCTTTACTTTGAGTAAGGAAAAAGATCAATTGGTTAAGGAAAGAGACGCTGCTCTCCAAGAGGCACATATGTGGCGGTCTGAGCTTGGGAAAGCCAGAGAGCGTGTTGTCATACTTGAAGGAGCTGTTGTGAGGGCCGAAGAGAAAGTGAGGGTTGCAGAAGCAAGCGGTGAAGCAAAATCAAAAGAGGCTTCTCAGAGAGAAGCAACTGCTTGGACAGAGAAGCAAGAGCTTTTAGCATATGTGAATATGTTACAAACTCAGCTTCAAAGGCAGCAACTAGAGACAAAGCAAGTGTGTGAGGAGAAGACTGAGTCTACTAACGGCGAAGCTTCTCTTCCAATGACAAAGGAAACAGAAAAGAATGTGGATAAAGCATGTCTGAGCATTTCAAGAACAGCCTCTATACCGGGAGAGAATGTAGTCCATATGAGTGAAGAGCAGGTAGTAAACGCTCAGCCTCCGGTGGGAGAAAACGAATGGAATGATATTCAGGCAACAGAGGCAAGAGTTTCTGATGTAAGAGAAATATCTGCAGAGACTGAACGGGACAGAAGAAACAGCTTGGATATCCCGGTAGTGTCTCCTGAACCTAACGTTCCACGCAATGATCCGCCTTCCGAATCATTTCATCACCAGCCTTGA
- >AT2G30880.2 ATGGCTTCCAACGGCGCTTCTCCGAGAATTGTTGATGCTACTGAGAACAGCTTGGATAAGATCAAGCGACAATTGGCATCTGGCTCTGGTCGGAACTTGCTACAAGGACCTCTTTTCAAGCGATCTGAAACTCTGAGAAAATGGAACGAACGATGGGTGATACTTGATCCAACAACAGGGAAAATGGAGTATAAGACGAGGCGAAATGAGCCAACTATCAAGGGAACAATTTTGTTTGACGAAAATAGCACAATCTCCATCTCTCCTGTCAACTTCCAGGGGCTTCCAAAATATAATGGTTGCTGTATTTATATTGGTACCCCACAGAAGAAAGATTACTTTTTGTGTGCAGAGACTCCTGGTGCAGCTAAAGCTTGGGTCACAACCTTACATGCGACACAGCTAGTTCTAAAGGCCCATAAGGAGGCTGTCGAATCTCTAAGTGGAAGTGGTTCTGCAACACTTGGTACCGTTGCAACCGTTGTTGCCGCTGCCAATTCAACAGCATTGGAATGTTCCAGAGAAATTCAAGCAGCAATGCAGATCTCTTTGAGGAATGCATTGAAAATAACGCCAAATAAACCGATTGATGGACCACTAGATGATTTGACAATAATGAAGGAAACTCTGCGTGTCAAAGATGAAGAATTACATAATTTAGCCAGGGAACTTCGTTCTCGTGACTCAATGATAAAGGAAATAGCAGATAAGCTATCTGAGACTGCTGAAGCAGCTGTAGCTGCAGCATCTGCTGCTCATACAATGGATGAACAAAGGAAAATCGTTTGTGTGGAATTTGAGCGCTTGACTACAGACTCACAGAGACAGCAAGAAGCCACAAAATTAAAGCTCAAGGAATTGGAAGAGAAGACCTTTACTTTGAGTAAGGAAAAAGATCAATTGGTTAAGGAAAGAGACGCTGCTCTCCAAGAGGCACATATGTGGCGGTCTGAGCTTGGGAAAGCCAGAGAGCGTGTTGTCATACTTGAAGGAGCTGTTGTGAGGGCCGAAGAGAAAGTGAGGGTTGCAGAAGCAAGCGGTGAAGCAAAATCAAAAGAGGCTTCTCAGAGAGAAGCAACTGCTTGGACAGAGAAGCAAGAGCTTTTAGCATATGTGAATATGTTACAAACTCAGCTTCAAAGGCAGCAACTAGAGACAAAGCAAGTGTGTGAGGAGAAGACTGAGTCTACTAACGGCGAAGCTTCTCTTCCAATGACAAAGGAAACAGAAAAGAATGTGGATAAAGCATGTCTGAGCATTTCAAGAACAGCCTCTATACCGGGAGAGAATGTAGTCCATATGAGTGAAGAGCAGGTAGTAAACGCTCAGCCTCCGGTGGGAGAAAACGAATGGAATGATATTCAGGCAACAGAGGCAAGAGTTTCTGATGTAAGAGAAATATCTGCAGAGACTGAACGGGACAGAAGAAACAGCTTGGATATCCCGGTAGTGTCTCCTGAACCTAACGTTCCACGCAATGATCCGCCTTCCGAATCATTTCATCACCAGCCTTGA
Protein Sequence
- >AT2G30880.1 MASNGASPRIVDATENSLDKIKRQLASGSGRNLLQGPLFKRSETLRKWNERWVILDPTTGKMEYKTRRNEPTIKGTILFDENSTISISPVNFQGLPKYNGCCIYIGTPQKKDYFLCAETPGAAKAWVTTLHATQLVLKAHKEAVESLSGSGSATLGTVATVVAAANSTALECSREIQAAMQISLRNALKITPNKPIDGPLDDLTIMKETLRVKDEELHNLARELRSRDSMIKEIADKLSETAEAAVAAASAAHTMDEQRKIVCVEFERLTTDSQRQQEATKLKLKELEEKTFTLSKEKDQLVKERDAALQEAHMWRSELGKARERVVILEGAVVRAEEKVRVAEASGEAKSKEASQREATAWTEKQELLAYVNMLQTQLQRQQLETKQVCEEKTESTNGEASLPMTKETEKNVDKACLSISRTASIPGENVVHMSEEQVVNAQPPVGENEWNDIQATEARVSDVREISAETERDRRNSLDIPVVSPEPNVPRNDPPSESFHHQP
- >AT2G30880.2 MASNGASPRIVDATENSLDKIKRQLASGSGRNLLQGPLFKRSETLRKWNERWVILDPTTGKMEYKTRRNEPTIKGTILFDENSTISISPVNFQGLPKYNGCCIYIGTPQKKDYFLCAETPGAAKAWVTTLHATQLVLKAHKEAVESLSGSGSATLGTVATVVAAANSTALECSREIQAAMQISLRNALKITPNKPIDGPLDDLTIMKETLRVKDEELHNLARELRSRDSMIKEIADKLSETAEAAVAAASAAHTMDEQRKIVCVEFERLTTDSQRQQEATKLKLKELEEKTFTLSKEKDQLVKERDAALQEAHMWRSELGKARERVVILEGAVVRAEEKVRVAEASGEAKSKEASQREATAWTEKQELLAYVNMLQTQLQRQQLETKQVCEEKTESTNGEASLPMTKETEKNVDKACLSISRTASIPGENVVHMSEEQVVNAQPPVGENEWNDIQATEARVSDVREISAETERDRRNSLDIPVVSPEPNVPRNDPPSESFHHQP