Gene Details:
- Gene ID: AT2G32590
- Gene Symbol: CAP-H, EMB2795
- Gene Name: EMBRYO DEFECTIVE 2795
- Description: condensin complex subunit;(source:Araport11)
- TAIR Accession: locus:2060273
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0000796 — part of — condensin complex
- GO:0000793 — located in — condensed chromosome
- GO:0005737 — located in — cytoplasm
- GO:0003682 — enables — chromatin binding
- GO:0007076 — involved in — mitotic chromosome condensation
- GO:0005634 — located in — nucleus
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , sepal , flower , inflorescence flower pedicel , petiole , hypocotyl , leaf apex , collective leaf structure , plant sperm cell
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- Characterization and dynamic analysis of Arabidopsis condensin subunits, AtCAP-H and AtCAP-H2. DOI: 10.1007/s00425-005-1546-0 ; PMID: 15883832
- Molecular foundations of reproductive lethality in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0028398 ; PMID: 22164284
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- The Arabidopsis condensin CAP-D subunits arrange interphase chromatin. DOI: 10.1111/nph.17221 ; PMID: 33475158
Sequence:
cDNA Sequence
- >AT2G32590.1 GAAGAGGGAAAATCAAAATATTAAAATCCCTAATTCCCAAATTATTTTGAATTTTCTCGGATCCACAAAGCTCCGGTGAACCCAACAAACGCATTTTCTCTCATTGAGTTTATACAAGCGGAGAAGTTCTGTCATGGATGAATCCTTAACTCCAAACCCTAAGCAAAAGCCAGCTTCAACGACGACTCGAATCCAGGCTCCGACGAGTCCCTTCTTCTTGGGATCTAACGATGACAGATTGGAACGGGAACAAGCTCGAGCCGCAAGAGCCGCTGCTAGCCGTCGTAGGTCTGTCATTTTCGCTCGTGGGTCTCAGCCTGAGACGGAGTCTGATCCTTGTTTCGACAAACAGCAAATTCTCGAGTTGTTTCAGAACTGTATCAAATTAGCCAGTGAAAACAAAATCAATCAAAAGAATACATGGGAGTTGAATTTGATCGACCATCTTTGTGAGATTATCAAAGTTGAAGATGAGAACAATACAGAAACAAATTTTCAAAAGGCAAGTTGCACTCTTGAAGCTGGAGTTAAGATTTACTCAATGCGGGTAGACTCTGTTCATTCAGAGGCATACAAGGTCTTGGGTGGAATTACCCGAGCTGGCCATGATGACGGTGGAGATCACGAGGATGCTGCTGGTGCCGTAGAAAATGCAACTAACCAAAAGAAGCAGCCAGAGAAAAAGATATCGCCTTTATCAACACTGGAACCTTCCTTTGATGCCCTTAACGTGAAGAAATTTGATGTGGCATTTGCAGTGGATCCCCTTTATCATCAGACTTCAGCACAGTTTGATGAAGGTGGAGCAAAGGGCCTGCTGCTAAACAATTTAGGAGTCTATGGAGGGTGTCAAGTTCTATTTGATTCACAAGAAATCCCTGGAAAGCTTGTTTCGTCTGCAAATAAGCATGACAAATCAGAAACAATTGATCTATCCTTTGTTAAAGAATGTGTGGAGCAAATGGTGCTAAACATGCGAAAGAAGGATGAGATTGTACCATCTCTTCGGGCTATAATCAATCAATTTGATGAAGAGAACCAAAGACCATCTGACACGTTTTCTTGTGGTCAGCAGACGACCGAGTCATTTGATATTTCACATGGTAATGATGCTAGCTATGCCGACGATGATGAAGGATATGAGAACTTTGGAACTTCTTTTGATTATGAGGGTCAATCCGGTGATGTTGATGAAAACTTTGGCCCCAATGAAGCAGAACCAATATATTCAAATTTTCATGAGGAAGTTGAACCAGCCTCCCTGCAAGACATGGATTCAGATGACAGACTGGAGAATGTTGATGACTATCTCTTTTTGTCGTTGGGAATTTCATCTAAGCAAAATTCTTGGGCAGGTCCTGATCACTGGAAGTATCGAAAAACAAAAGGTCCAGATGTTCAACCTGCTTCAGAAATTAAATCCTCTCCACCAGCGAAGAAAACCAGGAAAAAGAAGCAAGCAGAGCCTGAACTAGATTTTGCAAAAGCTTTGGAGGAAGAAATGCCTGATATTTTTGCCCCTCCAAAAAACCCAAAGACTTTACTTCTCCCAGCAAGTAGAACCCCTTGTCAAACGAAGCTTCCAGAGGATTGCCATTATCAACCTGAGAATCTAATAAAGCTATTTCTACTACCGAATGTGATGTGCCTTGGGAGGAGGAGAAGAAAAAACTCAGGTGAAACTTCAAGACAGCAGCCTGATGATTATGAACATGGGGAATCCTGGGGAAATGATAATGTTTATGATGATGATGATGGCCCATTCGATGATAATGAAAATGATCAAAGTGATGCAGAGGATACCAACACATTAATCTCTCAGCCACGCCAGGTCAACAAAATTGATGTCCAATACGATAAAGCTTCAAAACAAGTTGATGTGCAAGTGCTAAAGGAAACTCTTTGGGAGTGTCTTCAGGAATCTCATCAACCTCCAATTCAGGATGAGGAACATCAACAAGAACCACCTGAAAGTAGATCTTTCAAAGTGCTATTGGCTAGCTTCCCAGATGATTGCCAAGCAGCCGAGAGAACCCAAGACATCTCACCACATCTATGTTTCATCTGCTTGCTGCATTTGGCGAACGAGCACAATCTCAGCCTCATTGGTTCTCAAAACTTGGATGATCTAACAATACACCTTGCCTGAAAGAAAAGTGAAGATAGACCAAAAGGAGAAGCCGAGTGTTTAGAGAGTGCCTTTGTGCTCATCACTATGCCTAATAAGTATGTTGTAGTTCAATGTAATGACTTGATTGTGTTGTAACTTTGTTCAAAAT
CDS Sequence
- >AT2G32590.1 ATGGATGAATCCTTAACTCCAAACCCTAAGCAAAAGCCAGCTTCAACGACGACTCGAATCCAGGCTCCGACGAGTCCCTTCTTCTTGGGATCTAACGATGACAGATTGGAACGGGAACAAGCTCGAGCCGCAAGAGCCGCTGCTAGCCGTCGTAGGTCTGTCATTTTCGCTCGTGGGTCTCAGCCTGAGACGGAGTCTGATCCTTGTTTCGACAAACAGCAAATTCTCGAGTTGTTTCAGAACTGTATCAAATTAGCCAGTGAAAACAAAATCAATCAAAAGAATACATGGGAGTTGAATTTGATCGACCATCTTTGTGAGATTATCAAAGTTGAAGATGAGAACAATACAGAAACAAATTTTCAAAAGGCAAGTTGCACTCTTGAAGCTGGAGTTAAGATTTACTCAATGCGGGTAGACTCTGTTCATTCAGAGGCATACAAGGTCTTGGGTGGAATTACCCGAGCTGGCCATGATGACGGTGGAGATCACGAGGATGCTGCTGGTGCCGTAGAAAATGCAACTAACCAAAAGAAGCAGCCAGAGAAAAAGATATCGCCTTTATCAACACTGGAACCTTCCTTTGATGCCCTTAACGTGAAGAAATTTGATGTGGCATTTGCAGTGGATCCCCTTTATCATCAGACTTCAGCACAGTTTGATGAAGGTGGAGCAAAGGGCCTGCTGCTAAACAATTTAGGAGTCTATGGAGGGTGTCAAGTTCTATTTGATTCACAAGAAATCCCTGGAAAGCTTGTTTCGTCTGCAAATAAGCATGACAAATCAGAAACAATTGATCTATCCTTTGTTAAAGAATGTGTGGAGCAAATGGTGCTAAACATGCGAAAGAAGGATGAGATTGTACCATCTCTTCGGGCTATAATCAATCAATTTGATGAAGAGAACCAAAGACCATCTGACACGTTTTCTTGTGGTCAGCAGACGACCGAGTCATTTGATATTTCACATGGTAATGATGCTAGCTATGCCGACGATGATGAAGGATATGAGAACTTTGGAACTTCTTTTGATTATGAGGGTCAATCCGGTGATGTTGATGAAAACTTTGGCCCCAATGAAGCAGAACCAATATATTCAAATTTTCATGAGGAAGTTGAACCAGCCTCCCTGCAAGACATGGATTCAGATGACAGACTGGAGAATGTTGATGACTATCTCTTTTTGTCGTTGGGAATTTCATCTAAGCAAAATTCTTGGGCAGGTCCTGATCACTGGAAGTATCGAAAAACAAAAGGTCCAGATGTTCAACCTGCTTCAGAAATTAAATCCTCTCCACCAGCGAAGAAAACCAGGAAAAAGAAGCAAGCAGAGCCTGAACTAGATTTTGCAAAAGCTTTGGAGGAAGAAATGCCTGATATTTTTGCCCCTCCAAAAAACCCAAAGACTTTACTTCTCCCAGCAAGTAGAACCCCTTGTCAAACGAAGCTTCCAGAGGATTGCCATTATCAACCTGAGAATCTAATAAAGCTATTTCTACTACCGAATGTGATGTGCCTTGGGAGGAGGAGAAGAAAAAACTCAGGTGAAACTTCAAGACAGCAGCCTGATGATTATGAACATGGGGAATCCTGGGGAAATGATAATGTTTATGATGATGATGATGGCCCATTCGATGATAATGAAAATGATCAAAGTGATGCAGAGGATACCAACACATTAATCTCTCAGCCACGCCAGGTCAACAAAATTGATGTCCAATACGATAAAGCTTCAAAACAAGTTGATGTGCAAGTGCTAAAGGAAACTCTTTGGGAGTGTCTTCAGGAATCTCATCAACCTCCAATTCAGGATGAGGAACATCAACAAGAACCACCTGAAAGTAGATCTTTCAAAGTGCTATTGGCTAGCTTCCCAGATGATTGCCAAGCAGCCGAGAGAACCCAAGACATCTCACCACATCTATGTTTCATCTGCTTGCTGCATTTGGCGAACGAGCACAATCTCAGCCTCATTGGTTCTCAAAACTTGGATGATCTAACAATACACCTTGCCTGA
Protein Sequence
- >AT2G32590.1 MDESLTPNPKQKPASTTTRIQAPTSPFFLGSNDDRLEREQARAARAAASRRRSVIFARGSQPETESDPCFDKQQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEDENNTETNFQKASCTLEAGVKIYSMRVDSVHSEAYKVLGGITRAGHDDGGDHEDAAGAVENATNQKKQPEKKISPLSTLEPSFDALNVKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYGGCQVLFDSQEIPGKLVSSANKHDKSETIDLSFVKECVEQMVLNMRKKDEIVPSLRAIINQFDEENQRPSDTFSCGQQTTESFDISHGNDASYADDDEGYENFGTSFDYEGQSGDVDENFGPNEAEPIYSNFHEEVEPASLQDMDSDDRLENVDDYLFLSLGISSKQNSWAGPDHWKYRKTKGPDVQPASEIKSSPPAKKTRKKKQAEPELDFAKALEEEMPDIFAPPKNPKTLLLPASRTPCQTKLPEDCHYQPENLIKLFLLPNVMCLGRRRRKNSGETSRQQPDDYEHGESWGNDNVYDDDDGPFDDNENDQSDAEDTNTLISQPRQVNKIDVQYDKASKQVDVQVLKETLWECLQESHQPPIQDEEHQQEPPESRSFKVLLASFPDDCQAAERTQDISPHLCFICLLHLANEHNLSLIGSQNLDDLTIHLA