Gene Details:
- Gene ID: AT2G39350
- Gene Symbol: ABCG1, WBC1
- Gene Name: ATP-binding cassette G1, White Brown Complex 1
- Description: ABC-2 type transporter family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , root , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , hypocotyl , collective leaf structure , pollen , root
Literature:
- The Arabidopsis thaliana ABC protein superfamily, a complete inventory. DOI: 10.1074/jbc.M103104200 ; PMID: 11346655
- Inventory and comparative analysis of rice and Arabidopsis ATP-binding cassette (ABC) systems. DOI: 10.1016/j.jmb.2004.07.093 ; PMID: 15381434
- Cuticular lipid composition, surface structure, and gene expression in Arabidopsis stem epidermis. DOI: 10.1104/pp.105.070805 ; PMID: 16299169
- Nematode-induced changes of transporter gene expression in Arabidopsis roots. DOI: 10.1094/MPMI-18-1247 ; PMID: 16478044
- Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. DOI: 10.1111/j.1365-313X.2006.02756.x ; PMID: 16805732
- Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. DOI: 10.1093/dnares/dsl013 ; PMID: 17164256
- Altered profile of secondary metabolites in the root exudates of Arabidopsis ATP-binding cassette transporter mutants. DOI: 10.1104/pp.107.109587 ; PMID: 18065561
- Plant ABC proteins–a unified nomenclature and updated inventory. DOI: 10.1016/j.tplants.2008.02.001 ; PMID: 18299247
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- ABCG transporters are required for suberin and pollen wall extracellular barriers in Arabidopsis. DOI: 10.1105/tpc.114.129049 ; PMID: 25217507
- Postmeiotic development of pollen surface layers requires two Arabidopsis ABCG-type transporters. DOI: 10.1007/s00299-016-2001-3 ; PMID: 27271688
- Cloning and expression of selected ABC transporters from the Arabidopsis thaliana ABCG family in Pichia pastoris. DOI: 10.1371/journal.pone.0211156 ; PMID: 30657786
- ABCG1 contributes to suberin formation in Arabidopsis thaliana roots. DOI: 10.1038/s41598-019-47916-9 ; PMID: 31388073
- ATP binding cassette transporters ABCG1 and ABCG16 affect reproductive development via auxin signalling in Arabidopsis. DOI: 10.1111/tpj.14690 ; PMID: 31944421
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequence:
cDNA Sequence
- >AT2G39350.1 TCCCCAAATAAATAAACAATAAATCAAAACCGCATTTACATCCAAACAGTCAAAATATCAACCTAACATACTTTTCCCATGCAACTCACCCAGACTTTCTTATTTAACATAGCCTTCGTGTCTTCACACATCCAAACACGTCTCTTCATGCACTCTCTCGCTTCTATATAAGTTTTCAGTAACATAACAGATTTATACATATCCAACAAAAGTCCCATAAACTAAACAATAAACACTGCTGTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGAACAGTACGTTATGAGAGTGTTTTAAGGCCGTTAATTTGTTAAATCACTCTTTAAAAGTTTTTCTATTGTATCTATGGCTCGTATTGTAGCAGCTAATGATGATGATTCCATGGAGCTAAACACCATCTCCTCTATACACGATTCAACTTTAGGGCAACTTCTGAAGAACGTTAGTGACGTCAGAAAAATGGCTATTGGAGACGAGACTCCAGTTCACGAGTCCTTAAACCAAGACTACAACGATGGTTACATGCGTACAGTTCCATTCGTTCTCTCATTCGACAATCTCACATACAACGTCTCTGTTCGTCCAAAACTAGACTTCCGCAATCTCTTTCCACGTAGGAGAACAGAGGATCCGGAGATAGCTCAAACGGCGAGGCCAAAAACTAAAACCCTTCTCAATAATATCTCTGGCGAGACACGAGATGGAGAAATCATGGCTGTTCTAGGCGCTAGCGGCTCGGGAAAATCAACACTGATCGATGCATTAGCGAATCGGATTGCCAAAGGAAGCTTAAAAGGAACAGTGAAGCTAAACGGAGAAACACTTCAATCTCGAATGCTCAAAGTTATATCAGCTTACGTGATGCAAGATGACCTTCTCTTCCCAATGCTTACCGTTGAAGAAACACTAATGTTCGCAGCTGAGTTTCGTCTCCCGAGAAGTTTACCTAAATCTAAAAAGAAGCTTCGTGTGCAAGCTTTGATTGATCAACTAGGTATCAGAAACGCGGCTAAAACTATTATAGGAGACGAAGGTCACCGTGGAATCTCCGGTGGTGAAAGAAGACGTGTTTCCATCGGAATTGATATAATTCACGATCCGATTCTTCTCTTCCTCGATGAACCAACCTCTGGTTTGGATTCAACGAGTGCTTTCATGGTGGTTAAAGTATTGAAGAGGATTGCTCAGAGTGGTAGTATCGTAATTATGTCGATTCATCAACCTAGTCATCGTGTTCTCGGTTTGCTTGACCGGTTAATCTTCTTGTCACGTGGCCACACCGTGTATAGTGGATCTCCGGCGAGTCTTCCACGTTTTTTCACCGAATTCGGGAGTCCGATACCGGAGAACGAGAATCGAACGGAGTTTGCGTTAGATCTCATCCGTGAGCTTGAAGGATCCGCCGGAGGAACGAGAGGATTAATCGAATTCAACAAAAAATGGCAAGAGATGAAGAAACAGAGCAATCGTCAACCACCGTTGACTCCACCGTCATCACCGTACCCAAATCTAACACTAAAAGAAGCAATCGCCGCAAGTATCAGCAGAGGAAAGCTAGTTTCCGGCGGTGAATCCGTCGCTCACGGCGGAGCAACCACCAACACCACAACCCTAGCCGTTCCTGCATTCGCGAATCCAATGTGGATCGAAATCAAAACTCTCTCGAAACGATCAATGCTCAATTCACGAAGACAACCAGAGCTATTCGGAATCAGAATCGCCTCTGTTGTTATCACCGGATTCATTCTCGCCACCGTGTTCTGGCGATTAGATAATTCGCCTAAAGGAGTTCAAGAGCGGTTAGGGTTCTTCGCCTTCGCGATGTCGACAATGTTCTACACTTGCGCCGATGCGTTACCAGTTTTTCTCCAGGAACGTTATATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGATCCTCATACGTTCTCTCTCACGCCATCGTCTCATTCCCGTCGCTCATCTTCCTCTCTGTAGCTTTCGCGGCGACGACGTATTGGGCAGTGGGCTTAGATGGAGGCCTAACGGGCCTTTTGTTCTACTGTCTGATCATTTTAGCCTCGTTCTGGTCAGGAAGCTCCTTTGTCACGTTTCTATCAGGTGTGGTTCCTAGTGTGATGTTGGGTTACACAATCGTCGTTGCTATTTTGGCTTACTTCTTGTTGTTCAGTGGATTCTTCATCAACAGAAACCGAATCCCGGATTACTGGATTTGGTTTCATTACATGTCATTGGTGAAGTACCCGTATGAAGCGGTTTTACAGAACGAGTTCTCTGATGCGACCAAGTGTTTTGTGAGAGGAGTTCAGATTTTCGACAACACGCCATTAGGGGAACTACCGGAAGTGATGAAGCTGAAGCTTCTTGGTACAGTGAGCAAGTCCCTCGGGGTAACGATATCGAGCACGACTTGTTTAACTACTGGTTCAGATATTCTGAGGCAGCAAGGTGTGGTTCAGCTGAGTAAATGGAATTGCTTGTTCATCACAGTTGCTTTTGGGTTCTTTTTTAGGATTTTGTTCTACTTCACTTTGTTACTAGGAAGCAAGAACAAGCGGAGGTGAAAACAACTAGAAGACCCAAATCAAAACATACTTGTATTTTCTGTTTGTAATTCCTTGAATTGTTTAATGAAAATGGTTTCTTTTCATAT
CDS Sequence
- >AT2G39350.1 ATGGCTCGTATTGTAGCAGCTAATGATGATGATTCCATGGAGCTAAACACCATCTCCTCTATACACGATTCAACTTTAGGGCAACTTCTGAAGAACGTTAGTGACGTCAGAAAAATGGCTATTGGAGACGAGACTCCAGTTCACGAGTCCTTAAACCAAGACTACAACGATGGTTACATGCGTACAGTTCCATTCGTTCTCTCATTCGACAATCTCACATACAACGTCTCTGTTCGTCCAAAACTAGACTTCCGCAATCTCTTTCCACGTAGGAGAACAGAGGATCCGGAGATAGCTCAAACGGCGAGGCCAAAAACTAAAACCCTTCTCAATAATATCTCTGGCGAGACACGAGATGGAGAAATCATGGCTGTTCTAGGCGCTAGCGGCTCGGGAAAATCAACACTGATCGATGCATTAGCGAATCGGATTGCCAAAGGAAGCTTAAAAGGAACAGTGAAGCTAAACGGAGAAACACTTCAATCTCGAATGCTCAAAGTTATATCAGCTTACGTGATGCAAGATGACCTTCTCTTCCCAATGCTTACCGTTGAAGAAACACTAATGTTCGCAGCTGAGTTTCGTCTCCCGAGAAGTTTACCTAAATCTAAAAAGAAGCTTCGTGTGCAAGCTTTGATTGATCAACTAGGTATCAGAAACGCGGCTAAAACTATTATAGGAGACGAAGGTCACCGTGGAATCTCCGGTGGTGAAAGAAGACGTGTTTCCATCGGAATTGATATAATTCACGATCCGATTCTTCTCTTCCTCGATGAACCAACCTCTGGTTTGGATTCAACGAGTGCTTTCATGGTGGTTAAAGTATTGAAGAGGATTGCTCAGAGTGGTAGTATCGTAATTATGTCGATTCATCAACCTAGTCATCGTGTTCTCGGTTTGCTTGACCGGTTAATCTTCTTGTCACGTGGCCACACCGTGTATAGTGGATCTCCGGCGAGTCTTCCACGTTTTTTCACCGAATTCGGGAGTCCGATACCGGAGAACGAGAATCGAACGGAGTTTGCGTTAGATCTCATCCGTGAGCTTGAAGGATCCGCCGGAGGAACGAGAGGATTAATCGAATTCAACAAAAAATGGCAAGAGATGAAGAAACAGAGCAATCGTCAACCACCGTTGACTCCACCGTCATCACCGTACCCAAATCTAACACTAAAAGAAGCAATCGCCGCAAGTATCAGCAGAGGAAAGCTAGTTTCCGGCGGTGAATCCGTCGCTCACGGCGGAGCAACCACCAACACCACAACCCTAGCCGTTCCTGCATTCGCGAATCCAATGTGGATCGAAATCAAAACTCTCTCGAAACGATCAATGCTCAATTCACGAAGACAACCAGAGCTATTCGGAATCAGAATCGCCTCTGTTGTTATCACCGGATTCATTCTCGCCACCGTGTTCTGGCGATTAGATAATTCGCCTAAAGGAGTTCAAGAGCGGTTAGGGTTCTTCGCCTTCGCGATGTCGACAATGTTCTACACTTGCGCCGATGCGTTACCAGTTTTTCTCCAGGAACGTTATATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGATCCTCATACGTTCTCTCTCACGCCATCGTCTCATTCCCGTCGCTCATCTTCCTCTCTGTAGCTTTCGCGGCGACGACGTATTGGGCAGTGGGCTTAGATGGAGGCCTAACGGGCCTTTTGTTCTACTGTCTGATCATTTTAGCCTCGTTCTGGTCAGGAAGCTCCTTTGTCACGTTTCTATCAGGTGTGGTTCCTAGTGTGATGTTGGGTTACACAATCGTCGTTGCTATTTTGGCTTACTTCTTGTTGTTCAGTGGATTCTTCATCAACAGAAACCGAATCCCGGATTACTGGATTTGGTTTCATTACATGTCATTGGTGAAGTACCCGTATGAAGCGGTTTTACAGAACGAGTTCTCTGATGCGACCAAGTGTTTTGTGAGAGGAGTTCAGATTTTCGACAACACGCCATTAGGGGAACTACCGGAAGTGATGAAGCTGAAGCTTCTTGGTACAGTGAGCAAGTCCCTCGGGGTAACGATATCGAGCACGACTTGTTTAACTACTGGTTCAGATATTCTGAGGCAGCAAGGTGTGGTTCAGCTGAGTAAATGGAATTGCTTGTTCATCACAGTTGCTTTTGGGTTCTTTTTTAGGATTTTGTTCTACTTCACTTTGTTACTAGGAAGCAAGAACAAGCGGAGGTGA
Protein Sequence
- >AT2G39350.1 MARIVAANDDDSMELNTISSIHDSTLGQLLKNVSDVRKMAIGDETPVHESLNQDYNDGYMRTVPFVLSFDNLTYNVSVRPKLDFRNLFPRRRTEDPEIAQTARPKTKTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGSPASLPRFFTEFGSPIPENENRTEFALDLIRELEGSAGGTRGLIEFNKKWQEMKKQSNRQPPLTPPSSPYPNLTLKEAIAASISRGKLVSGGESVAHGGATTNTTTLAVPAFANPMWIEIKTLSKRSMLNSRRQPELFGIRIASVVITGFILATVFWRLDNSPKGVQERLGFFAFAMSTMFYTCADALPVFLQERYIFMRETAYNAYRRSSYVLSHAIVSFPSLIFLSVAFAATTYWAVGLDGGLTGLLFYCLIILASFWSGSSFVTFLSGVVPSVMLGYTIVVAILAYFLLFSGFFINRNRIPDYWIWFHYMSLVKYPYEAVLQNEFSDATKCFVRGVQIFDNTPLGELPEVMKLKLLGTVSKSLGVTISSTTCLTTGSDILRQQGVVQLSKWNCLFITVAFGFFFRILFYFTLLLGSKNKRR