Gene Details:
- Gene ID: AT3G05410
- Gene Symbol: PPD7
- Gene Name:
- Description: Photosystem II reaction center PsbP family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Germplasm Phenotype:
- SALK_083295C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
Literature:
- Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana. DOI: 10.1105/tpc.105.036723 ; PMID: 16284307
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Characterization of the Free and Membrane-Associated Fractions of the Thylakoid Lumen Proteome in Arabidopsis thaliana. DOI: 10.3390/ijms22158126 ; PMID: 34360890
Sequence:
cDNA Sequence
- >AT3G05410.3 GTTGTCGTATAATCTCCCTCTCGAGGTGATAAGAGAGTCGACGGCAACACTCAGCGACCTCACTTAACGAACAGAGACGAGAAATGTCTCTGAAACCTTATTTCTCTCTACTATACTCATCTCCCACTAATGTAAAACTTTCCAACTTCTTAATCGCTCAACAACCCTCCGGTGACCTGAAAACTACCCCGGCCGAGGAGTTTTCTCCACTGGTTGAGAAATTCAACCGACGGCTTCTTCTGGGTGTAGGATCGTCCTCTGTTCTTGCGATTGGTGCGAATTTCGGAGGAACCACGAGTTTTATACTCGGTTTATCGCCAGGGATAGGCCGGAATCTAAAACTCGACGTCATTTATCCGATTGGAGGATATAGCAGATGTATCGATACGGTTGAAGGATTCGAATTTATATATCCGGCTACGTGGGTTGGAGACCAGACGCTTTTGTATAGAGCGGCGGAGAAGTCAGAACGGGAGAATTCGCTAGACCTTCCTCCGGCAAGAAACAGTCGCCGGAAAAACGTTAATGAACCGGTTGTTGCATTTGGACCGCCCGGTTCGACCGGTGAGCTTAATGTCAGTGTTATCGTTTCCCCTGTCTCACCCAGTTTCTCTTGCGTTACCGGGATAGCAAGCCCCCCATGTCGCCTACTATTACGCTCTCGCCATAAACTGTGGATCGTTGCTTGGAAAGTATAA
- >AT3G05410.1 GTTGTCGTATAATCTCCCTCTCGAGGTGATAAGAGAGTCGACGGCAACACTCAGCGACCTCACTTAACGAACAGAGACGAGAAATGTCTCTGAAACCTTATTTCTCTCTACTATACTCATCTCCCACTAATGTAAAACTTTCCAACTTCTTAATCGCTCAACAACCCTCCGGTGACCTGAAAACTACCCCGGCCGAGGAGTTTTCTCCACTGGTTGAGAAATTCAACCGACGGCTTCTTCTGGGTGTAGGATCGTCCTCTGTTCTTGCGATTGGTGCGAATTTCGGAGGAACCACGAGTTTTATACTCGGTTTATCGCCAGGGATAGGCCGGAATCTAAAACTCGACGTCATTTATCCGATTGGAGGATATAGCAGATGTATCGATACGGTTGAAGGATTCGAATTTATATATCCGGCTACGTGGGTTGGAGACCAGACGCTTTTGTATAGAGCGGCGGAGAAGTCAGAACGGGAGAATTCGCTAGACCTTCCTCCGGCAAGAAACAGTCGCCGGAAAAACGTTAATGAACCGGTTGTTGCATTTGGACCGCCCGGTTCGACCGGTGAGCTTAATGTCAGTGTTATCGTTTCCCCTGTCTCACCCAGTTTCTCTTGCGTTACCGGGATAGCAAGCCCCCCATGTCGCCTACTATTACGCTCTCGCCATAAACTGTGGATCGTTGCTTGGAAAGTATAA
- >AT3G05410.2 GTTGTCGTATAATCTCCCTCTCGAGGTGATAAGAGAGTCGACGGCAACACTCAGCGACCTCACTTAACGAACAGAGACGAGAAATGTCTCTGAAACCTTATTTCTCTCTACTATACTCATCTCCCACTAATGTAAAACTTTCCAACTTCTTAATCGCTCAACAACCCTCCGGTGACCTGAAAACTACCCCGGCCGAGGAGTTTTCTCCACTGGTTGAGAAATTCAACCGACGGCTTCTTCTGGGTGTAGGATCGTCCTCTGTTCTTGCGATTGGTGCGAATTTCGGAGGAACCACGAGTTTTATACTCGGTTTATCGCCAGGGATAGGCCGGAATCTAAAACTCGACGTCATTTATCCGATTGGAGGATATAGCAGATGTATCGATACGGTTGAAGGATTCGAATTTATATATCCGGCTACGTGGGTTGGAGACCAGACGCTTTTGTATAGAGCGGCGGAGAAGTCAGAACGGGAGAATTCGCTAGACCTTCCTCCGGCAAGAAACAGTCGCCGGAAAAACGTTAATGAACCGGTTGTTGCATTTGGACCGCCCGGTTCGACCGGTGAGCTTAATGTCAGTGTTATCGTTTCCCCTGTCTCACCCAGTTTCTCTTGCGTTACCGGGATAGCAAGCCCCCCATGTCGCCTACTATTACGCTCTCGCCATAAACTGTGGATCGTTGCTTGGAAAGTATAA
CDS Sequence
- >AT3G05410.3 ATGTCTCTGAAACCTTATTTCTCTCTACTATACTCATCTCCCACTAATGTAAAACTTTCCAACTTCTTAATCGCTCAACAACCCTCCGGTGACCTGAAAACTACCCCGGCCGAGGAGTTTTCTCCACTGGTTGAGAAATTCAACCGACGGCTTCTTCTGGGTGTAGGATCGTCCTCTGTTCTTGCGATTGGTGCGAATTTCGGAGGAACCACGAGTTTTATACTCGGTTTATCGCCAGGGATAGGCCGGAATCTAAAACTCGACGTCATTTATCCGATTGGAGGATATAGCAGATGTATCGATACGGTTGAAGGATTCGAATTTATATATCCGGCTACGTGGGTTGGAGACCAGACGCTTTTGTATAGAGCGGCGGAGAAGTCAGAACGGGAGAATTCGCTAGACCTTCCTCCGGCAAGAAACAGTCGCCGGAAAAACGTTAATGAACCGGTTGTTGCATTTGGACCGCCCGGTTCGACCGGTGAGCTTAATGTCAGTGTTATCGTTTCCCCTGTCTCACCCAGTTTCTCTTGCGTTACCGGGATAGCAAGCCCCCCATGTCGCCTACTATTACGCTCTCGCCATAAACTGTGGATCGTTGCTTGGAAAGTATAA
- >AT3G05410.1 ATGTCTCTGAAACCTTATTTCTCTCTACTATACTCATCTCCCACTAATGTAAAACTTTCCAACTTCTTAATCGCTCAACAACCCTCCGGTGACCTGAAAACTACCCCGGCCGAGGAGTTTTCTCCACTGGTTGAGAAATTCAACCGACGGCTTCTTCTGGGTGTAGGATCGTCCTCTGTTCTTGCGATTGGTGCGAATTTCGGAGGAACCACGAGTTTTATACTCGGTTTATCGCCAGGGATAGGCCGGAATCTAAAACTCGACGTCATTTATCCGATTGGAGGATATAGCAGATGTATCGATACGGTTGAAGGATTCGAATTTATATATCCGGCTACGTGGGTTGGAGACCAGACGCTTTTGTATAGAGCGGCGGAGAAGTCAGAACGGGAGAATTCGCTAGACCTTCCTCCGGCAAGAAACAGTCGCCGGAAAAACGTTAATGAACCGGTTGTTGCATTTGGACCGCCCGGTTCGACCGGTGAGCTTAATGTCAGTGTTATCGTTTCCCCTGTCTCACCCAGTTTCTCTTGCGTTACCGGGATAGCAAGCCCCCCATGTCGCCTACTATTACGCTCTCGCCATAAACTGTGGATCGTTGCTTGGAAAGTATAA
- >AT3G05410.2 ATGTCTCTGAAACCTTATTTCTCTCTACTATACTCATCTCCCACTAATGTAAAACTTTCCAACTTCTTAATCGCTCAACAACCCTCCGGTGACCTGAAAACTACCCCGGCCGAGGAGTTTTCTCCACTGGTTGAGAAATTCAACCGACGGCTTCTTCTGGGTGTAGGATCGTCCTCTGTTCTTGCGATTGGTGCGAATTTCGGAGGAACCACGAGTTTTATACTCGGTTTATCGCCAGGGATAGGCCGGAATCTAAAACTCGACGTCATTTATCCGATTGGAGGATATAGCAGATGTATCGATACGGTTGAAGGATTCGAATTTATATATCCGGCTACGTGGGTTGGAGACCAGACGCTTTTGTATAGAGCGGCGGAGAAGTCAGAACGGGAGAATTCGCTAGACCTTCCTCCGGCAAGAAACAGTCGCCGGAAAAACGTTAATGAACCGGTTGTTGCATTTGGACCGCCCGGTTCGACCGGTGAGCTTAATGTCAGTGTTATCGTTTCCCCTGTCTCACCCAGTTTCTCTTGCGTTACCGGGATAGCAAGCCCCCCATGTCGCCTACTATTACGCTCTCGCCATAAACTGTGGATCGTTGCTTGGAAAGTATAA
Protein Sequence
- >AT3G05410.3 MSLKPYFSLLYSSPTNVKLSNFLIAQQPSGDLKTTPAEEFSPLVEKFNRRLLLGVGSSSVLAIGANFGGTTSFILGLSPGIGRNLKLDVIYPIGGYSRCIDTVEGFEFIYPATWVGDQTLLYRAAEKSERENSLDLPPARNSRRKNVNEPVVAFGPPGSTGELNVSVIVSPVSPSFSCVTGIASPPCRLLLRSRHKLWIVAWKV
- >AT3G05410.1 MSLKPYFSLLYSSPTNVKLSNFLIAQQPSGDLKTTPAEEFSPLVEKFNRRLLLGVGSSSVLAIGANFGGTTSFILGLSPGIGRNLKLDVIYPIGGYSRCIDTVEGFEFIYPATWVGDQTLLYRAAEKSERENSLDLPPARNSRRKNVNEPVVAFGPPGSTGELNVSVIVSPVSPSFSCVTGIASPPCRLLLRSRHKLWIVAWKV
- >AT3G05410.2 MSLKPYFSLLYSSPTNVKLSNFLIAQQPSGDLKTTPAEEFSPLVEKFNRRLLLGVGSSSVLAIGANFGGTTSFILGLSPGIGRNLKLDVIYPIGGYSRCIDTVEGFEFIYPATWVGDQTLLYRAAEKSERENSLDLPPARNSRRKNVNEPVVAFGPPGSTGELNVSVIVSPVSPSFSCVTGIASPPCRLLLRSRHKLWIVAWKV