Gene Details:
- Gene ID: AT3G07525
- Gene Symbol: ATATG10, ATG10
- Gene Name: autophagy 10
- Description: autophagocytosis-associated family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Germplasm Phenotype:
- CS39994 — Under a short-day photoperiod (8h light/16h dark), the atg10-1 plants developed slightly slower, bolted later, and produced 70% less seed than wild type; hypersensitive to either nitrogen or carbon deprivation; senescence and programmed cell death is initiated more quickly than in wild type.
- atg10-1 — Reduced fertility (70% fewer seeds), slower bolting (late flowering) and slower growing. Increased sensitivity to nitrogen and carbon deprivation.
Literature:
- The formation of Anthocyanic Vacuolar Inclusions in Arabidopsis thaliana and implications for the sequestration of anthocyanin pigments. DOI: 10.1093/mp/ssp071 ; PMID: 20085894
- ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A AND ATG12B loci. DOI: 10.1111/j.1365-313X.2010.04166.x ; PMID: 20136727
- A critical role of autophagy in plant resistance to necrotrophic fungal pathogens. DOI: 10.1111/j.1365-313X.2011.04553.x ; PMID: 21395886
- TRAF Family Proteins Regulate Autophagy Dynamics by Modulating AUTOPHAGY PROTEIN6 Stability in Arabidopsis. DOI: 10.1105/tpc.17.00056 ; PMID: 28351989
- Arabidopsis SINAT Proteins Control Autophagy by Mediating Ubiquitylation and Degradation of ATG13. DOI: 10.1105/tpc.19.00413 ; PMID: 31732704
- Autophagic Degradation of the 26S Proteasome Is Mediated by the Dual ATG8/Ubiquitin Receptor RPN10 in Arabidopsis. DOI: 10.1016/j.molcel.2021.03.026 ; PMID: 33961777
- The core autophagy machinery is not required for chloroplast singlet oxygen-mediated cell death in the Arabidopsis thaliana plastid ferrochelatase two mutant. DOI: 10.1186/s12870-021-03119-x ; PMID: 34281507
Sequence:
cDNA Sequence
- >AT3G07525.1 CGGAGGTTTATGCAAGGCGGCGATGGAGGTTGTCGAGGACGAAGCGGCGGATTTAATTCGAAACTGGTTTAGATTCGAAAATCGAATTTCTCCGGTTCGGTTTGGTTGGATTAGTTAATTTTTTCAAAAACTAAATTCGGGTTGGTTGCTTTGATACGATGTTGCTGAGATAATAGACCGGAGAAAGACGACGAAGAGATCAGCGATTTTGTTTACTCCTCCAATGGATTCAGCTCGAGAGGTCAGCGATGGTAGACTCACCGTCGAAGGTTTCTCTGTAGCTTCTCGAGCTTTTGCCGATAAGTGGAAGATACATAACCAATCGTTCCCTCCATGGTCTTGGGTTCCTCTGATCAATCGAACTCTACTTGTTTCAAAGAAGGAGGAAGGTTACTTGTCGCTGGAGAAGATCATAATTCTCAGTTCACTTGAGGAGGAAATTCCAGAGGATGAATCTCTAAATGTAGCTACTGATTGCTTGGAAAAAGAAGAAACAGTTGATCACACGATTTTGGTCCCAACCATGGAAAATGAAGCACACTACTATGATTTCCATATAGTTTACAGTGCATCATACAAGGTTCCTGTGCTATATTTTCGCGGATACTGCAGCGGTGGAGAACCTCTTGCTTTGGATGTCATAAAAAAAGATGTACCCTCATGCTCTGTTAGTCTTTTGCTGGAATCTAAGTGGACTTTTATAACTCAAGAGGAGCATCCATATTTGAACAGGCCATGGTTCAAGCTACATCCCTGTGGGACTGAGGACTGGATCAAGCTGCTTTCCCAAAGTAGCAGCTCTTCTGGATGTCAGATGCCAATTGTGTTGTACTTGGTTTCATGGTTCTCTGTTGTCGGGCAGGTGGTTGGTCTTAGGATCCCTCTTGAGATGCTGAATTAGTAGCCATCTTCTGTTATCAAAATATATAATGTATCAGTGGCTCCAAACCCTCGGCAACAACTTTTAAAGGTACGCATTTCTGAATAAGAATTTTCAGAAGAAACTAGGGACTAAAAAACTTGAGTTTCATTAACATATGAGTGGCTTCAATTCATGAGTCTGCAAACATCGTAATCAAATCTAGCTATTATGTTCTTGAGGTATTTAAGTTGAATTCGTTTTTTCCAACAAACCATTTTGCTTACACCACTTCGGGTAATTGTAACATAACGGCTGATTCTAAAAAAAAGGCTTACTATTTCAGTATTTCTACGTAAAGTTTGTAA
- >AT3G07525.2 CGGAGGTTTATGCAAGGCGGCGATGGAGGTTGTCGAGGACGAAGCGGCGGATTTAATTCGAAACTGGTTTAGATTCGAAAATCGAATTTCTCCGGTTCGGTTTGGTTGGATTAGTTAATTTTTTCAAAAACTAAATTCGGGTTGGTTGCTTTGATACGATGTTGCTGAGATAATAGACCGGAGAAAGACGACGAAGAGATCAGCGATTTTGTTTACTCCTCCAATGGATTCAGCTCGAGAGGTCAGCGATGGTAGACTCACCGTCGAAGGTTTCTCTGTAGCTTCTCGAGCTTTTGCCGATAAGTGGAAGATACATAACCAATCGTTCCCTCCATGGTCTTGGGTTCCTCTGATCAATCGAACTCTACTTGTTTCAAAGAAGGAGGAAGGTTACTTGTCGCTGGAGAAGATCATAATTCTCAGTTCACTTGAGGAGGAAATTCCAGAGGATGAATCTCTAAATGTAGCTACTGATTGCTTGGAAAAAGAAGAAACAGTTGATCACACGATTTTGGTCCCAACCATGGAAAATGAAGCACACTACTATGATTTCCATATAGTTTACAGTGCATCATACAAGGTTCCTGTGCTATATTTTCGCGGATACTGCAGCGGTGGAGAACCTCTTGCTTTGGATGTCATAAAAAAAGATGTACCCTCATGCTCTGTTAGTCTTTTGCTGGAATCTAAGTGGACTTTTATAACTCAAGAGGAGCATCCATATTTGAACAGGCCATGGTTCAAGCTACATCCCTGTGGGACTGAGGACTGGATCAAGCTGCTTTCCCAAAGTAGCAGCTCTTCTGGATGTCAGATGCCAATTGTGTTGTACTTGGTTTCATGGTTCTCTGTTGTCGGGCAGGTGGTTGGTCTTAGGATCCCTCTTGAGATGCTGAATTAGTAGCCATCTTCTGTTATCAAAATATATAATGTATCAGTGGCTCCAAACCCTCGGCAACAACTTTTAAAGGTACGCATTTCTGAATAAGAATTTTCAGAAGAAACTAGGGACTAAAAAACTTGAGTTTCATTAACATATGAGTGGCTTCAATTCATGAGTCTGCAAACATCGTAATCAAATCTAGCTATTATGTTCTTGAGGTATTTAAGTTGAATTCGTTTTTTCCAACAAACCATTTTGCTTACACCACTTCGGGTAATTGTAACATAACGGCTGATTCTAAAAAAAAGGCTTACTATTTCAGTATTTCTACGTAAAGTTTGTAA
CDS Sequence
- >AT3G07525.1 ATGGATTCAGCTCGAGAGGTCAGCGATGGTAGACTCACCGTCGAAGGTTTCTCTGTAGCTTCTCGAGCTTTTGCCGATAAGTGGAAGATACATAACCAATCGTTCCCTCCATGGTCTTGGGTTCCTCTGATCAATCGAACTCTACTTGTTTCAAAGAAGGAGGAAGGTTACTTGTCGCTGGAGAAGATCATAATTCTCAGTTCACTTGAGGAGGAAATTCCAGAGGATGAATCTCTAAATGTAGCTACTGATTGCTTGGAAAAAGAAGAAACAGTTGATCACACGATTTTGGTCCCAACCATGGAAAATGAAGCACACTACTATGATTTCCATATAGTTTACAGTGCATCATACAAGGTTCCTGTGCTATATTTTCGCGGATACTGCAGCGGTGGAGAACCTCTTGCTTTGGATGTCATAAAAAAAGATGTACCCTCATGCTCTGTTAGTCTTTTGCTGGAATCTAAGTGGACTTTTATAACTCAAGAGGAGCATCCATATTTGAACAGGCCATGGTTCAAGCTACATCCCTGTGGGACTGAGGACTGGATCAAGCTGCTTTCCCAAAGTAGCAGCTCTTCTGGATGTCAGATGCCAATTGTGTTGTACTTGGTTTCATGGTTCTCTGTTGTCGGGCAGGTGGTTGGTCTTAGGATCCCTCTTGAGATGCTGAATTAG
- >AT3G07525.2 ATGGATTCAGCTCGAGAGGTCAGCGATGGTAGACTCACCGTCGAAGGTTTCTCTGTAGCTTCTCGAGCTTTTGCCGATAAGTGGAAGATACATAACCAATCGTTCCCTCCATGGTCTTGGGTTCCTCTGATCAATCGAACTCTACTTGTTTCAAAGAAGGAGGAAGGTTACTTGTCGCTGGAGAAGATCATAATTCTCAGTTCACTTGAGGAGGAAATTCCAGAGGATGAATCTCTAAATGTAGCTACTGATTGCTTGGAAAAAGAAGAAACAGTTGATCACACGATTTTGGTCCCAACCATGGAAAATGAAGCACACTACTATGATTTCCATATAGTTTACAGTGCATCATACAAGGTTCCTGTGCTATATTTTCGCGGATACTGCAGCGGTGGAGAACCTCTTGCTTTGGATGTCATAAAAAAAGATGTACCCTCATGCTCTGTTAGTCTTTTGCTGGAATCTAAGTGGACTTTTATAACTCAAGAGGAGCATCCATATTTGAACAGGCCATGGTTCAAGCTACATCCCTGTGGGACTGAGGACTGGATCAAGCTGCTTTCCCAAAGTAGCAGCTCTTCTGGATGTCAGATGCCAATTGTGTTGTACTTGGTTTCATGGTTCTCTGTTGTCGGGCAGGTGGTTGGTCTTAGGATCCCTCTTGAGATGCTGAATTAG
Protein Sequence
- >AT3G07525.1 MDSAREVSDGRLTVEGFSVASRAFADKWKIHNQSFPPWSWVPLINRTLLVSKKEEGYLSLEKIIILSSLEEEIPEDESLNVATDCLEKEETVDHTILVPTMENEAHYYDFHIVYSASYKVPVLYFRGYCSGGEPLALDVIKKDVPSCSVSLLLESKWTFITQEEHPYLNRPWFKLHPCGTEDWIKLLSQSSSSSGCQMPIVLYLVSWFSVVGQVVGLRIPLEMLN
- >AT3G07525.2 MDSAREVSDGRLTVEGFSVASRAFADKWKIHNQSFPPWSWVPLINRTLLVSKKEEGYLSLEKIIILSSLEEEIPEDESLNVATDCLEKEETVDHTILVPTMENEAHYYDFHIVYSASYKVPVLYFRGYCSGGEPLALDVIKKDVPSCSVSLLLESKWTFITQEEHPYLNRPWFKLHPCGTEDWIKLLSQSSSSSGCQMPIVLYLVSWFSVVGQVVGLRIPLEMLN