Gene Details:
- Gene ID: AT3G08505
- Gene Symbol: AtC3H35
- Gene Name:
- Description: zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11)
- TAIR Accession: locus:2831040
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0005634 — located in — nucleus
- GO:0061630 — enables — ubiquitin protein ligase activity
Literature:
- Calmodulin interacts with and regulates the RNA-binding activity of an Arabidopsis polyadenylation factor subunit. DOI: 10.1104/pp.105.070672 ; PMID: 16500995
- Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice. DOI: 10.1186/1471-2164-9-44 ; PMID: 18221561
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequence:
cDNA Sequence
- >AT3G08505.3 TGGTGGAGGTGGAGGAAGCGCGCTCTATCTCAAAAACGTTGGGGTCTGCTTGGTCCTCAACAATTGAAAACCGTACAAATTCAATTTCTTCACATAAAGCTCTCTCTTCCTTCTCCATTCTTCCACCCTTTTTTTTCTTCTCTCCGCACAAATCCCCAAATGTCCGATAGGATACTGTGCAAGTTCTTTGTCCATGGCTCGTGCTTGAAAGGCGAAAATTGCGAATTTTCCCATGACTCTAAGGATCCGCCCAATAATGTTTGCACATTCTATCAGAAACGAATATGTTTGTACGGAAGTAGATGTAGATACGATCATGTCAGAGCTGCTTCCAATCTTCCTCTTAGCTCAGATTCTGAGTCTTTAGATCGCTCTATATCCACCACCCCCTCTAGGCATTTGCAACAACAAGGCGATAATAATGACGGTGACAAATCCTCTAACGTTTACTGTATCCACCCTAGAGAGTACCCGATCTGCTCTTTTGCTGCAGCTGGTGATTGCCCTCGAGGTAACCAGTGTCCACATATGCATGGTGACCTCTGCAATACTTGTGGCAAGAAGTGTTTGCATCCTTTTAGACCCGAGGAACGAGAAGAGCATACGAAAGAATGTGAGAAGAAGCAGAAGCACATTGAGGCTTTGAAACAAAGTCAAGATATTGAGTGTAGTGTGTGTTTGGATCGTATCTTGTCAAAGGCTACTCCAGGGGAAAGGAAGTTTGGGCTGTTGACTGAGTGTGATCATCCGTTTTGTATACAATGTATTCGTAATTGGCGTAGCAGTGCTCCTGTTTCGGGAATGGATGTCAACAGTACGTTGAGAGCTTGTCCTATATGTCGCAAACTCTCTTATTTTGTTGTCCCTAGTGTGGTCTGGTACTCTTCTCCTGAGGAGAAGAAGGAAATTATCGACATATACAAGGCTAAACTCAGATCAATCGACTGTAAGCACTTCAACTTTGGAAATGGAAACTGCCCATTTGGAGCAAGTTGTTTCTATAAGCATGCATATTCTGATGGTCACTTGGAAGAGGTTGTTTTACGGCATCTTGGTTCTCAAGAAGGAGAAACTGTAATAACAGACAGTATCAGGCTATCAGAGTTCCTTGGTGGCCTGCAGATTTTCTAAAATATTTTTTCCCAGATAAATCGAATAACACAAGGTGGTGATGACAACTTAATATTCTTATCAAACTCATTTTGATTCTGAGTTTTGACAATCCTCTTAAATAAGGTGAAGTAATGTTTATTTATCTTTATCTTTCAGATTATCGTACTAGAATTTTCCTTGTTGGCTGATTCAAGCTATCTTCTTATTATAGAAATGTAGACATGCTCAGAGAGGATAATAGTTAAAAAGAGATAAGGACACAGGAGAAACTCAATGTAATAATATTTAGATAGGGAATGTTACTCTACTACACAATAATGTAAAAAAAAATGTGTGTGAATATACCAACAAATAATGTAAATAATGCTTTCATAGCACTCCGTCTGTAAGATATTTTAGATAAATAAAATTTGAGTTTCTATT
- >AT3G08505.2 TGGTGGAGGTGGAGGAAGCGCGCTCTATCTCAAAAACGTTGGGGTCTGCTTGGTCCTCAACAATTGAAAACCGTACAAATTCAATTTCTTCACATAAAGCTCTCTCTTCCTTCTCCATTCTTCCACCCTTTTTTTTCTTCTCTCCGCACAAATCCCCAAATGTCCGATAGGATACTGTGCAAGTTCTTTGTCCATGGCTCGTGCTTGAAAGGCGAAAATTGCGAATTTTCCCATGACTCTAAGGATCCGCCCAATAATGTTTGCACATTCTATCAGAAACGAATATGTTTGTACGGAAGTAGATGTAGATACGATCATGTCAGAGCTGCTTCCAATCTTCCTCTTAGCTCAGATTCTGAGTCTTTAGATCGCTCTATATCCACCACCCCCTCTAGGCATTTGCAACAACAAGGCGATAATAATGACGGTGACAAATCCTCTAACGTTTACTGTATCCACCCTAGAGAGTACCCGATCTGCTCTTTTGCTGCAGCTGGTGATTGCCCTCGAGGTAACCAGTGTCCACATATGCATGGTGACCTCTGCAATACTTGTGGCAAGAAGTGTTTGCATCCTTTTAGACCCGAGGAACGAGAAGAGCATACGAAAGAATGTGAGAAGAAGCAGAAGCACATTGAGGCTTTGAAACAAAGTCAAGATATTGAGTGTAGTGTGTGTTTGGATCGTATCTTGTCAAAGGCTACTCCAGGGGAAAGGAAGTTTGGGCTGTTGACTGAGTGTGATCATCCGTTTTGTATACAATGTATTCGTAATTGGCGTAGCAGTGCTCCTGTTTCGGGAATGGATGTCAACAGTACGTTGAGAGCTTGTCCTATATGTCGCAAACTCTCTTATTTTGTTGTCCCTAGTGTGGTCTGGTACTCTTCTCCTGAGGAGAAGAAGGAAATTATCGACATATACAAGGCTAAACTCAGATCAATCGACTGTAAGCACTTCAACTTTGGAAATGGAAACTGCCCATTTGGAGCAAGTTGTTTCTATAAGCATGCATATTCTGATGGTCACTTGGAAGAGGTTGTTTTACGGCATCTTGGTTCTCAAGAAGGAGAAACTGTAATAACAGACAGTATCAGGCTATCAGAGTTCCTTGGTGGCCTGCAGATTTTCTAAAATATTTTTTCCCAGATAAATCGAATAACACAAGGTGGTGATGACAACTTAATATTCTTATCAAACTCATTTTGATTCTGAGTTTTGACAATCCTCTTAAATAAGGTGAAGTAATGTTTATTTATCTTTATCTTTCAGATTATCGTACTAGAATTTTCCTTGTTGGCTGATTCAAGCTATCTTCTTATTATAGAAATGTAGACATGCTCAGAGAGGATAATAGTTAAAAAGAGATAAGGACACAGGAGAAACTCAATGTAATAATATTTAGATAGGGAATGTTACTCTACTACACAATAATGTAAAAAAAAATGTGTGTGAATATACCAACAAATAATGTAAATAATGCTTTCATAGCACTCCGTCTGTAAGATATTTTAGATAAATAAAATTTGAGTTTCTATT
- >AT3G08505.1 TGGTGGAGGTGGAGGAAGCGCGCTCTATCTCAAAAACGTTGGGGTCTGCTTGGTCCTCAACAATTGAAAACCGTACAAATTCAATTTCTTCACATAAAGCTCTCTCTTCCTTCTCCATTCTTCCACCCTTTTTTTTCTTCTCTCCGCACAAATCCCCAAATGTCCGATAGGATACTGTGCAAGTTCTTTGTCCATGGCTCGTGCTTGAAAGGCGAAAATTGCGAATTTTCCCATGACTCTAAGGATCCGCCCAATAATGTTTGCACATTCTATCAGAAACGAATATGTTTGTACGGAAGTAGATGTAGATACGATCATGTCAGAGCTGCTTCCAATCTTCCTCTTAGCTCAGATTCTGAGTCTTTAGATCGCTCTATATCCACCACCCCCTCTAGGCATTTGCAACAACAAGGCGATAATAATGACGGTGACAAATCCTCTAACGTTTACTGTATCCACCCTAGAGAGTACCCGATCTGCTCTTTTGCTGCAGCTGGTGATTGCCCTCGAGGTAACCAGTGTCCACATATGCATGGTGACCTCTGCAATACTTGTGGCAAGAAGTGTTTGCATCCTTTTAGACCCGAGGAACGAGAAGAGCATACGAAAGAATGTGAGAAGAAGCAGAAGCACATTGAGGCTTTGAAACAAAGTCAAGATATTGAGTGTAGTGTGTGTTTGGATCGTATCTTGTCAAAGGCTACTCCAGGGGAAAGGAAGTTTGGGCTGTTGACTGAGTGTGATCATCCGTTTTGTATACAATGTATTCGTAATTGGCGTAGCAGTGCTCCTGTTTCGGGAATGGATGTCAACAGTACGTTGAGAGCTTGTCCTATATGTCGCAAACTCTCTTATTTTGTTGTCCCTAGTGTGGTCTGGTACTCTTCTCCTGAGGAGAAGAAGGAAATTATCGACATATACAAGGCTAAACTCAGATCAATCGACTGTAAGCACTTCAACTTTGGAAATGGAAACTGCCCATTTGGAGCAAGTTGTTTCTATAAGCATGCATATTCTGATGGTCACTTGGAAGAGGTTGTTTTACGGCATCTTGGTTCTCAAGAAGGAGAAACTGTAATAACAGACAGTATCAGGCTATCAGAGTTCCTTGGTGGCCTGCAGATTTTCTAAAATATTTTTTCCCAGATAAATCGAATAACACAAGGTGGTGATGACAACTTAATATTCTTATCAAACTCATTTTGATTCTGAGTTTTGACAATCCTCTTAAATAAGGTGAAGTAATGTTTATTTATCTTTATCTTTCAGATTATCGTACTAGAATTTTCCTTGTTGGCTGATTCAAGCTATCTTCTTATTATAGAAATGTAGACATGCTCAGAGAGGATAATAGTTAAAAAGAGATAAGGACACAGGAGAAACTCAATGTAATAATATTTAGATAGGGAATGTTACTCTACTACACAATAATGTAAAAAAAAATGTGTGTGAATATACCAACAAATAATGTAAATAATGCTTTCATAGCACTCCGTCTGTAAGATATTTTAGATAAATAAAATTTGAGTTTCTATT
CDS Sequence
- >AT3G08505.3 ATGTCCGATAGGATACTGTGCAAGTTCTTTGTCCATGGCTCGTGCTTGAAAGGCGAAAATTGCGAATTTTCCCATGACTCTAAGGATCCGCCCAATAATGTTTGCACATTCTATCAGAAACGAATATGTTTGTACGGAAGTAGATGTAGATACGATCATGTCAGAGCTGCTTCCAATCTTCCTCTTAGCTCAGATTCTGAGTCTTTAGATCGCTCTATATCCACCACCCCCTCTAGGCATTTGCAACAACAAGGCGATAATAATGACGGTGACAAATCCTCTAACGTTTACTGTATCCACCCTAGAGAGTACCCGATCTGCTCTTTTGCTGCAGCTGGTGATTGCCCTCGAGGTAACCAGTGTCCACATATGCATGGTGACCTCTGCAATACTTGTGGCAAGAAGTGTTTGCATCCTTTTAGACCCGAGGAACGAGAAGAGCATACGAAAGAATGTGAGAAGAAGCAGAAGCACATTGAGGCTTTGAAACAAAGTCAAGATATTGAGTGTAGTGTGTGTTTGGATCGTATCTTGTCAAAGGCTACTCCAGGGGAAAGGAAGTTTGGGCTGTTGACTGAGTGTGATCATCCGTTTTGTATACAATGTATTCGTAATTGGCGTAGCAGTGCTCCTGTTTCGGGAATGGATGTCAACAGTACGTTGAGAGCTTGTCCTATATGTCGCAAACTCTCTTATTTTGTTGTCCCTAGTGTGGTCTGGTACTCTTCTCCTGAGGAGAAGAAGGAAATTATCGACATATACAAGGCTAAACTCAGATCAATCGACTGTAAGCACTTCAACTTTGGAAATGGAAACTGCCCATTTGGAGCAAGTTGTTTCTATAAGCATGCATATTCTGATGGTCACTTGGAAGAGGTTGTTTTACGGCATCTTGGTTCTCAAGAAGGAGAAACTGTAATAACAGACAGTATCAGGCTATCAGAGTTCCTTGGTGGCCTGCAGATTTTCTAA
- >AT3G08505.2 ATGTCCGATAGGATACTGTGCAAGTTCTTTGTCCATGGCTCGTGCTTGAAAGGCGAAAATTGCGAATTTTCCCATGACTCTAAGGATCCGCCCAATAATGTTTGCACATTCTATCAGAAACGAATATGTTTGTACGGAAGTAGATGTAGATACGATCATGTCAGAGCTGCTTCCAATCTTCCTCTTAGCTCAGATTCTGAGTCTTTAGATCGCTCTATATCCACCACCCCCTCTAGGCATTTGCAACAACAAGGCGATAATAATGACGGTGACAAATCCTCTAACGTTTACTGTATCCACCCTAGAGAGTACCCGATCTGCTCTTTTGCTGCAGCTGGTGATTGCCCTCGAGGTAACCAGTGTCCACATATGCATGGTGACCTCTGCAATACTTGTGGCAAGAAGTGTTTGCATCCTTTTAGACCCGAGGAACGAGAAGAGCATACGAAAGAATGTGAGAAGAAGCAGAAGCACATTGAGGCTTTGAAACAAAGTCAAGATATTGAGTGTAGTGTGTGTTTGGATCGTATCTTGTCAAAGGCTACTCCAGGGGAAAGGAAGTTTGGGCTGTTGACTGAGTGTGATCATCCGTTTTGTATACAATGTATTCGTAATTGGCGTAGCAGTGCTCCTGTTTCGGGAATGGATGTCAACAGTACGTTGAGAGCTTGTCCTATATGTCGCAAACTCTCTTATTTTGTTGTCCCTAGTGTGGTCTGGTACTCTTCTCCTGAGGAGAAGAAGGAAATTATCGACATATACAAGGCTAAACTCAGATCAATCGACTGTAAGCACTTCAACTTTGGAAATGGAAACTGCCCATTTGGAGCAAGTTGTTTCTATAAGCATGCATATTCTGATGGTCACTTGGAAGAGGTTGTTTTACGGCATCTTGGTTCTCAAGAAGGAGAAACTGTAATAACAGACAGTATCAGGCTATCAGAGTTCCTTGGTGGCCTGCAGATTTTCTAA
- >AT3G08505.1 ATGTCCGATAGGATACTGTGCAAGTTCTTTGTCCATGGCTCGTGCTTGAAAGGCGAAAATTGCGAATTTTCCCATGACTCTAAGGATCCGCCCAATAATGTTTGCACATTCTATCAGAAACGAATATGTTTGTACGGAAGTAGATGTAGATACGATCATGTCAGAGCTGCTTCCAATCTTCCTCTTAGCTCAGATTCTGAGTCTTTAGATCGCTCTATATCCACCACCCCCTCTAGGCATTTGCAACAACAAGGCGATAATAATGACGGTGACAAATCCTCTAACGTTTACTGTATCCACCCTAGAGAGTACCCGATCTGCTCTTTTGCTGCAGCTGGTGATTGCCCTCGAGGTAACCAGTGTCCACATATGCATGGTGACCTCTGCAATACTTGTGGCAAGAAGTGTTTGCATCCTTTTAGACCCGAGGAACGAGAAGAGCATACGAAAGAATGTGAGAAGAAGCAGAAGCACATTGAGGCTTTGAAACAAAGTCAAGATATTGAGTGTAGTGTGTGTTTGGATCGTATCTTGTCAAAGGCTACTCCAGGGGAAAGGAAGTTTGGGCTGTTGACTGAGTGTGATCATCCGTTTTGTATACAATGTATTCGTAATTGGCGTAGCAGTGCTCCTGTTTCGGGAATGGATGTCAACAGTACGTTGAGAGCTTGTCCTATATGTCGCAAACTCTCTTATTTTGTTGTCCCTAGTGTGGTCTGGTACTCTTCTCCTGAGGAGAAGAAGGAAATTATCGACATATACAAGGCTAAACTCAGATCAATCGACTGTAAGCACTTCAACTTTGGAAATGGAAACTGCCCATTTGGAGCAAGTTGTTTCTATAAGCATGCATATTCTGATGGTCACTTGGAAGAGGTTGTTTTACGGCATCTTGGTTCTCAAGAAGGAGAAACTGTAATAACAGACAGTATCAGGCTATCAGAGTTCCTTGGTGGCCTGCAGATTTTCTAA
Protein Sequence
- >AT3G08505.3 MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVRAASNLPLSSDSESLDRSISTTPSRHLQQQGDNNDGDKSSNVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFRPEEREEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCKHFNFGNGNCPFGASCFYKHAYSDGHLEEVVLRHLGSQEGETVITDSIRLSEFLGGLQIF
- >AT3G08505.2 MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVRAASNLPLSSDSESLDRSISTTPSRHLQQQGDNNDGDKSSNVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFRPEEREEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCKHFNFGNGNCPFGASCFYKHAYSDGHLEEVVLRHLGSQEGETVITDSIRLSEFLGGLQIF
- >AT3G08505.1 MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVRAASNLPLSSDSESLDRSISTTPSRHLQQQGDNNDGDKSSNVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFRPEEREEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCKHFNFGNGNCPFGASCFYKHAYSDGHLEEVVLRHLGSQEGETVITDSIRLSEFLGGLQIF