Gene Details:
- Gene ID: AT3G08620
- Gene Symbol: AtKH12
- Gene Name:
- Description: RNA-binding KH domain-containing protein;(source:Araport11)
- TAIR Accession: locus:2077818
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0048024 — involved in — regulation of mRNA splicing, via spliceosome
- GO:0005739 — located in — mitochondrion
- GO:0005634 — located in — nucleus
- GO:0003729 — enables — mRNA binding
- GO:0005634 — is active in — nucleus
Literature:
- Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana. DOI: 10.1093/nar/30.3.623 ; PMID: 11809873
- Genome-Wide Characterization and Expression Analysis of KH Family Genes Response to ABA and SA in Arabidopsis thaliana. DOI: 10.3390/ijms23010511 ; PMID: 35008936
Sequence:
cDNA Sequence
- >AT3G08620.2 TGTTTTTTGCTCGTTTTCTGCAGTCAATACATATCTCAGTTGTTAGCAGAGCATCAAAAGCTTGGACCTTTCATGCAAGTCTTACCCATTTGTAGCCGACTCTTAAATCAAGAAATTTTCCGGATCACCGGAATGATGCCCAACCAAGGATTTACCGATTTTGATAGGTTACGGCATCGAAGTCCTAGTCCAATGGCTTCACCAAATCTTATGTCTAATGTTTCCGGTGGTGGATTAGGTGGTTGGAATGGTCTTCCACCAGAGAGAATTGGTGGTCCTCATGGAATGGCAATGGAGTGGCAAGGTGCGCCAGCTAGCCCAAGTTCATACCCAGTGAAGCGTATTTTGCGTTTAGATCTTCCAGTTGATACCTATCCGAATTTCAATTTTGTTGGAAGGCTTCTGGGTCCTAGAGGGAATTCATTAAAGCGTGTGGAAGCAACTACGGGTTGCCGTGTGTATATTAGAGGGAAAGGATCAATTAAGGATCCTGAAAAAGAAGAGAAACTGAAAGGGAAGCCTGGCTATGAGCATCTCAATGAGCAGTTGCATATCCTCATTGAGGCTGATCTTCCAATTGATATTGTGGATATAAAGCTGCGGCAGGCCCAAGAAATAATCGAGGAGTTGGTCAAGCCTGTGGATGAGTCGCAGGATTACATCAAGAGGCAGCAGTTGCGAGAGCTAGCGTTGCTGAATTCAAACTTGAGAGAAAACAGCCCAGGACCAAGCGGTAGTGTCTCTCCTTTCAATTCAAATGCAATGAAACGCCCAAAAACAGGGCGTTAAGAGCTTGAGAGATCCTAGATAAAAATTATGTGCATATGTGTATAACTGGCCTAATGGTGTTGGTTGAGTCTGCTCTTGGTTCTTCTGCTTACCCTCTGATCCACACACTGATGCTTATACACAAAGCACCAAGAGAACAGTTTCCTCCTTGACCGGGGTTTGATGCATTGTAACCATCAAAGATATTAGATAATTTGGATTTATTCATGTGTTGAAGTAGTTGTATTCTTGACTTTGGAATGGAGATCTAGTTACATGTATATGTGGATAGATAGATACCTTACCAAT
- >AT3G08620.1 TGTTTTTTGCTCGTTTTCTGCAGTCAATACATATCTCAGTTGTTAGCAGAGCATCAAAAGCTTGGACCTTTCATGCAAGTCTTACCCATTTGTAGCCGACTCTTAAATCAAGAAATTTTCCGGATCACCGGAATGATGCCCAACCAAGGATTTACCGATTTTGATAGGTTACGGCATCGAAGTCCTAGTCCAATGGCTTCACCAAATCTTATGTCTAATGTTTCCGGTGGTGGATTAGGTGGTTGGAATGGTCTTCCACCAGAGAGAATTGGTGGTCCTCATGGAATGGCAATGGAGTGGCAAGGTGCGCCAGCTAGCCCAAGTTCATACCCAGTGAAGCGTATTTTGCGTTTAGATCTTCCAGTTGATACCTATCCGAATTTCAATTTTGTTGGAAGGCTTCTGGGTCCTAGAGGGAATTCATTAAAGCGTGTGGAAGCAACTACGGGTTGCCGTGTGTATATTAGAGGGAAAGGATCAATTAAGGATCCTGAAAAAGAAGAGAAACTGAAAGGGAAGCCTGGCTATGAGCATCTCAATGAGCAGTTGCATATCCTCATTGAGGCTGATCTTCCAATTGATATTGTGGATATAAAGCTGCGGCAGGCCCAAGAAATAATCGAGGAGTTGGTCAAGCCTGTGGATGAGTCGCAGGATTACATCAAGAGGCAGCAGTTGCGAGAGCTAGCGTTGCTGAATTCAAACTTGAGAGAAAACAGCCCAGGACCAAGCGGTAGTGTCTCTCCTTTCAATTCAAATGCAATGAAACGCCCAAAAACAGGGCGTTAAGAGCTTGAGAGATCCTAGATAAAAATTATGTGCATATGTGTATAACTGGCCTAATGGTGTTGGTTGAGTCTGCTCTTGGTTCTTCTGCTTACCCTCTGATCCACACACTGATGCTTATACACAAAGCACCAAGAGAACAGTTTCCTCCTTGACCGGGGTTTGATGCATTGTAACCATCAAAGATATTAGATAATTTGGATTTATTCATGTGTTGAAGTAGTTGTATTCTTGACTTTGGAATGGAGATCTAGTTACATGTATATGTGGATAGATAGATACCTTACCAAT
CDS Sequence
- >AT3G08620.2 ATGCAAGTCTTACCCATTTGTAGCCGACTCTTAAATCAAGAAATTTTCCGGATCACCGGAATGATGCCCAACCAAGGATTTACCGATTTTGATAGGTTACGGCATCGAAGTCCTAGTCCAATGGCTTCACCAAATCTTATGTCTAATGTTTCCGGTGGTGGATTAGGTGGTTGGAATGGTCTTCCACCAGAGAGAATTGGTGGTCCTCATGGAATGGCAATGGAGTGGCAAGGTGCGCCAGCTAGCCCAAGTTCATACCCAGTGAAGCGTATTTTGCGTTTAGATCTTCCAGTTGATACCTATCCGAATTTCAATTTTGTTGGAAGGCTTCTGGGTCCTAGAGGGAATTCATTAAAGCGTGTGGAAGCAACTACGGGTTGCCGTGTGTATATTAGAGGGAAAGGATCAATTAAGGATCCTGAAAAAGAAGAGAAACTGAAAGGGAAGCCTGGCTATGAGCATCTCAATGAGCAGTTGCATATCCTCATTGAGGCTGATCTTCCAATTGATATTGTGGATATAAAGCTGCGGCAGGCCCAAGAAATAATCGAGGAGTTGGTCAAGCCTGTGGATGAGTCGCAGGATTACATCAAGAGGCAGCAGTTGCGAGAGCTAGCGTTGCTGAATTCAAACTTGAGAGAAAACAGCCCAGGACCAAGCGGTAGTGTCTCTCCTTTCAATTCAAATGCAATGAAACGCCCAAAAACAGGGCGTTAA
- >AT3G08620.1 ATGCAAGTCTTACCCATTTGTAGCCGACTCTTAAATCAAGAAATTTTCCGGATCACCGGAATGATGCCCAACCAAGGATTTACCGATTTTGATAGGTTACGGCATCGAAGTCCTAGTCCAATGGCTTCACCAAATCTTATGTCTAATGTTTCCGGTGGTGGATTAGGTGGTTGGAATGGTCTTCCACCAGAGAGAATTGGTGGTCCTCATGGAATGGCAATGGAGTGGCAAGGTGCGCCAGCTAGCCCAAGTTCATACCCAGTGAAGCGTATTTTGCGTTTAGATCTTCCAGTTGATACCTATCCGAATTTCAATTTTGTTGGAAGGCTTCTGGGTCCTAGAGGGAATTCATTAAAGCGTGTGGAAGCAACTACGGGTTGCCGTGTGTATATTAGAGGGAAAGGATCAATTAAGGATCCTGAAAAAGAAGAGAAACTGAAAGGGAAGCCTGGCTATGAGCATCTCAATGAGCAGTTGCATATCCTCATTGAGGCTGATCTTCCAATTGATATTGTGGATATAAAGCTGCGGCAGGCCCAAGAAATAATCGAGGAGTTGGTCAAGCCTGTGGATGAGTCGCAGGATTACATCAAGAGGCAGCAGTTGCGAGAGCTAGCGTTGCTGAATTCAAACTTGAGAGAAAACAGCCCAGGACCAAGCGGTAGTGTCTCTCCTTTCAATTCAAATGCAATGAAACGCCCAAAAACAGGGCGTTAA
Protein Sequence
- >AT3G08620.2 MQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR
- >AT3G08620.1 MQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR