Gene Details:
- Gene ID: AT3G08860
- Gene Symbol: PYD4
- Gene Name: PYRIMIDINE 4
- Description: PYRIMIDINE 4;(source:Araport11)
- TAIR Accession: locus:2097623
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0043562 — acts upstream of or within — cellular response to nitrogen levels
- GO:0008453 — enables — alanine-glyoxylate transaminase activity
- GO:0008483 — enables — transaminase activity
- GO:0030170 — enables — pyridoxal phosphate binding
Literature:
- Alanine aminotransferase homologs catalyze the glutamate:glyoxylate aminotransferase reaction in peroxisomes of Arabidopsis. DOI: 10.1104/pp.011460 ; PMID: 12529529
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling. DOI: 10.1104/pp.104.038844 ; PMID: 15194820
- Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter. DOI: 10.1105/tpc.104.022699 ; PMID: 15319476
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- γ-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots. DOI: 10.1111/pce.12033 ; PMID: 23148892
- A transcriptomics approach uncovers novel roles for poly(ADP-ribosyl)ation in the basal defense response in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0190268 ; PMID: 29284022
- Identification of genes expressed in vascular tissues using NPA-induced vascular overgrowth in Arabidopsis. DOI: 10.1093/pcp/pcn023 ; PMID: 18296723
Sequence:
cDNA Sequence
- >AT3G08860.2 AACAAACGGACACGCTTCAGCTGATGATAGATTTAATTTTGCCAATAGTATAAACCAGTTACGCCTTTTTATAGAACAACTCTGCCATACTTGATAATTCATACACTCTATCTCTTCTCTCTCTCAATCTCTCAAAAGATCTCCGGTAACGTTTTAACGTCGGTGAAAAAATGCGGAAGTTAACGGCGGTTAATTCACTACTGAAACGGAACAATTATCTTCTTCCGCGCCATGGCTCCTCACAAACAGCAGCTCAGAGAACATCCTCCGTCCGCGAGACCGAGACCGAAACAAAACTTCCGAAAATGCCCCCGTTCAATTATTCTCCGCCGCCTTACGACGGTCCATCTACGGCAGAGATCATCGCAAAGCGGCGAGAGTTCCTCAGCCCCGCTCTTTTTCACTTCTACAACACACCCTTAAACATTGTGGAGGCAAAGATGCAGTATGTGTTCGACGAGAATGGACGTCGATATTTAGATGCCTTTGGAGGAATAGCGACGGTTTCGTGCGGCCATTGCCACCCGGAAGTAGTTAACTCCGTCGTCAAACAGTTGAAACTTATTAACCACTCCACCATCCTTTACCTTAACCACACCATCTCCGATTTCGCTGAAGCCCTTGTCTCCACTCTTCCGGGAGATCTCAAGGTGGTGTTTTTCACGAATTCGGGTACGGAGGCGAATGAACTTGCGATGATGATGGCTAGACTGTATACAGGATGTAACGACATCGTTTCGCTTAGGAACTCTTATCATGGAAACGCAGCTGCTACTATGGGTGCCACTGCTCAGTCCAACTGGAAATTCAACGTCGTTCAGAGTGGAGTTCATCACGCCATAAATCCAGATCCTTACAGAGGAATATTTGGATCCGACGGTGAAAAGTACGCGAGTGATGTACACGATCTTATCCAATTCGGAACGTCCGGTCAAGTCGCCGGTTTCATTGGCGAATCAATCCAGGGTGTTGGAGGAATCGTAGAGCTTGCTCCCGGATACTTACCGGCGGCTTACGACATCGTGAGGAAAGCCGGAGGAGTTTGCATCGCCGATGAAGTCCAATCCGGTTTTGCTCGTACCGGAACCCATTTCTGGGGGTTTCAATCCCATGGTGTTATCCCTGACATCGTCACCATGGCCAAGGGGATCGGTAACGGTATACCACTTGGAGCGGTTGTGACGACACCGGAGATTGCCGGCGTTTTAAGCCGTCGGAGTTACTTTAATACTTTCGGCGGAAATCCAATGTGCACGGCCGCAGGACACGCAGTACTTAGAGTCCTTCACGAAGAGAAGCTCCAAGAGAATGCTAACCTCGTTGGCTCACATCTTAAACGTAGACTTACGCTACTCAAAAACAAATACGAACTCATTGGAGACGTGAGAGGGAGAGGATTGATGCTAGGAGTTGAGTTTGTCAAAGACCGCGACTTAAAAACTCCTGCAAAAGCAGAGACCCTTCATTTAATGGATCAAATGAAAGAAATGGGAGTGTTGGTGGGGAAAGGTGGATTCTATGGGAATGTCTTCAGAATCACTCCTCCTCTCTGCTTCACCCTCTCCGACGCTGGTTAGCTCCTTAGTTTAACATATATATCTTCAAATTGGTTTCTTTTTGTTTCATTTTTTTATTCATG
- >AT3G08860.1 AACAAACGGACACGCTTCAGCTGATGATAGATTTAATTTTGCCAATAGTATAAACCAGTTACGCCTTTTTATAGAACAACTCTGCCATACTTGATAATTCATACACTCTATCTCTTCTCTCTCTCAATCTCTCAAAAGATCTCCGGTAACGTTTTAACGTCGGTGAAAAAATGCGGAAGTTAACGGCGGTTAATTCACTACTGAAACGGAACAATTATCTTCTTCCGCGCCATGGCTCCTCACAAACAGCAGCTCAGAGAACATCCTCCGTCCGCGAGACCGAGACCGAAACAAAACTTCCGAAAATGCCCCCGTTCAATTATTCTCCGCCGCCTTACGACGGTCCATCTACGGCAGAGATCATCGCAAAGCGGCGAGAGTTCCTCAGCCCCGCTCTTTTTCACTTCTACAACACACCCTTAAACATTGTGGAGGCAAAGATGCAGTATGTGTTCGACGAGAATGGACGTCGATATTTAGATGCCTTTGGAGGAATAGCGACGGTTTCGTGCGGCCATTGCCACCCGGAAGTAGTTAACTCCGTCGTCAAACAGTTGAAACTTATTAACCACTCCACCATCCTTTACCTTAACCACACCATCTCCGATTTCGCTGAAGCCCTTGTCTCCACTCTTCCGGGAGATCTCAAGGTGGTGTTTTTCACGAATTCGGGTACGGAGGCGAATGAACTTGCGATGATGATGGCTAGACTGTATACAGGATGTAACGACATCGTTTCGCTTAGGAACTCTTATCATGGAAACGCAGCTGCTACTATGGGTGCCACTGCTCAGTCCAACTGGAAATTCAACGTCGTTCAGAGTGGAGTTCATCACGCCATAAATCCAGATCCTTACAGAGGAATATTTGGATCCGACGGTGAAAAGTACGCGAGTGATGTACACGATCTTATCCAATTCGGAACGTCCGGTCAAGTCGCCGGTTTCATTGGCGAATCAATCCAGGGTGTTGGAGGAATCGTAGAGCTTGCTCCCGGATACTTACCGGCGGCTTACGACATCGTGAGGAAAGCCGGAGGAGTTTGCATCGCCGATGAAGTCCAATCCGGTTTTGCTCGTACCGGAACCCATTTCTGGGGGTTTCAATCCCATGGTGTTATCCCTGACATCGTCACCATGGCCAAGGGGATCGGTAACGGTATACCACTTGGAGCGGTTGTGACGACACCGGAGATTGCCGGCGTTTTAAGCCGTCGGAGTTACTTTAATACTTTCGGCGGAAATCCAATGTGCACGGCCGCAGGACACGCAGTACTTAGAGTCCTTCACGAAGAGAAGCTCCAAGAGAATGCTAACCTCGTTGGCTCACATCTTAAACGTAGACTTACGCTACTCAAAAACAAATACGAACTCATTGGAGACGTGAGAGGGAGAGGATTGATGCTAGGAGTTGAGTTTGTCAAAGACCGCGACTTAAAAACTCCTGCAAAAGCAGAGACCCTTCATTTAATGGATCAAATGAAAGAAATGGGAGTGTTGGTGGGGAAAGGTGGATTCTATGGGAATGTCTTCAGAATCACTCCTCCTCTCTGCTTCACCCTCTCCGACGCTGGTTAGCTCCTTAGTTTAACATATATATCTTCAAATTGGTTTCTTTTTGTTTCATTTTTTTATTCATG
CDS Sequence
- >AT3G08860.2 ATGCGGAAGTTAACGGCGGTTAATTCACTACTGAAACGGAACAATTATCTTCTTCCGCGCCATGGCTCCTCACAAACAGCAGCTCAGAGAACATCCTCCGTCCGCGAGACCGAGACCGAAACAAAACTTCCGAAAATGCCCCCGTTCAATTATTCTCCGCCGCCTTACGACGGTCCATCTACGGCAGAGATCATCGCAAAGCGGCGAGAGTTCCTCAGCCCCGCTCTTTTTCACTTCTACAACACACCCTTAAACATTGTGGAGGCAAAGATGCAGTATGTGTTCGACGAGAATGGACGTCGATATTTAGATGCCTTTGGAGGAATAGCGACGGTTTCGTGCGGCCATTGCCACCCGGAAGTAGTTAACTCCGTCGTCAAACAGTTGAAACTTATTAACCACTCCACCATCCTTTACCTTAACCACACCATCTCCGATTTCGCTGAAGCCCTTGTCTCCACTCTTCCGGGAGATCTCAAGGTGGTGTTTTTCACGAATTCGGGTACGGAGGCGAATGAACTTGCGATGATGATGGCTAGACTGTATACAGGATGTAACGACATCGTTTCGCTTAGGAACTCTTATCATGGAAACGCAGCTGCTACTATGGGTGCCACTGCTCAGTCCAACTGGAAATTCAACGTCGTTCAGAGTGGAGTTCATCACGCCATAAATCCAGATCCTTACAGAGGAATATTTGGATCCGACGGTGAAAAGTACGCGAGTGATGTACACGATCTTATCCAATTCGGAACGTCCGGTCAAGTCGCCGGTTTCATTGGCGAATCAATCCAGGGTGTTGGAGGAATCGTAGAGCTTGCTCCCGGATACTTACCGGCGGCTTACGACATCGTGAGGAAAGCCGGAGGAGTTTGCATCGCCGATGAAGTCCAATCCGGTTTTGCTCGTACCGGAACCCATTTCTGGGGGTTTCAATCCCATGGTGTTATCCCTGACATCGTCACCATGGCCAAGGGGATCGGTAACGGTATACCACTTGGAGCGGTTGTGACGACACCGGAGATTGCCGGCGTTTTAAGCCGTCGGAGTTACTTTAATACTTTCGGCGGAAATCCAATGTGCACGGCCGCAGGACACGCAGTACTTAGAGTCCTTCACGAAGAGAAGCTCCAAGAGAATGCTAACCTCGTTGGCTCACATCTTAAACGTAGACTTACGCTACTCAAAAACAAATACGAACTCATTGGAGACGTGAGAGGGAGAGGATTGATGCTAGGAGTTGAGTTTGTCAAAGACCGCGACTTAAAAACTCCTGCAAAAGCAGAGACCCTTCATTTAATGGATCAAATGAAAGAAATGGGAGTGTTGGTGGGGAAAGGTGGATTCTATGGGAATGTCTTCAGAATCACTCCTCCTCTCTGCTTCACCCTCTCCGACGCTGGTTAG
- >AT3G08860.1 ATGCGGAAGTTAACGGCGGTTAATTCACTACTGAAACGGAACAATTATCTTCTTCCGCGCCATGGCTCCTCACAAACAGCAGCTCAGAGAACATCCTCCGTCCGCGAGACCGAGACCGAAACAAAACTTCCGAAAATGCCCCCGTTCAATTATTCTCCGCCGCCTTACGACGGTCCATCTACGGCAGAGATCATCGCAAAGCGGCGAGAGTTCCTCAGCCCCGCTCTTTTTCACTTCTACAACACACCCTTAAACATTGTGGAGGCAAAGATGCAGTATGTGTTCGACGAGAATGGACGTCGATATTTAGATGCCTTTGGAGGAATAGCGACGGTTTCGTGCGGCCATTGCCACCCGGAAGTAGTTAACTCCGTCGTCAAACAGTTGAAACTTATTAACCACTCCACCATCCTTTACCTTAACCACACCATCTCCGATTTCGCTGAAGCCCTTGTCTCCACTCTTCCGGGAGATCTCAAGGTGGTGTTTTTCACGAATTCGGGTACGGAGGCGAATGAACTTGCGATGATGATGGCTAGACTGTATACAGGATGTAACGACATCGTTTCGCTTAGGAACTCTTATCATGGAAACGCAGCTGCTACTATGGGTGCCACTGCTCAGTCCAACTGGAAATTCAACGTCGTTCAGAGTGGAGTTCATCACGCCATAAATCCAGATCCTTACAGAGGAATATTTGGATCCGACGGTGAAAAGTACGCGAGTGATGTACACGATCTTATCCAATTCGGAACGTCCGGTCAAGTCGCCGGTTTCATTGGCGAATCAATCCAGGGTGTTGGAGGAATCGTAGAGCTTGCTCCCGGATACTTACCGGCGGCTTACGACATCGTGAGGAAAGCCGGAGGAGTTTGCATCGCCGATGAAGTCCAATCCGGTTTTGCTCGTACCGGAACCCATTTCTGGGGGTTTCAATCCCATGGTGTTATCCCTGACATCGTCACCATGGCCAAGGGGATCGGTAACGGTATACCACTTGGAGCGGTTGTGACGACACCGGAGATTGCCGGCGTTTTAAGCCGTCGGAGTTACTTTAATACTTTCGGCGGAAATCCAATGTGCACGGCCGCAGGACACGCAGTACTTAGAGTCCTTCACGAAGAGAAGCTCCAAGAGAATGCTAACCTCGTTGGCTCACATCTTAAACGTAGACTTACGCTACTCAAAAACAAATACGAACTCATTGGAGACGTGAGAGGGAGAGGATTGATGCTAGGAGTTGAGTTTGTCAAAGACCGCGACTTAAAAACTCCTGCAAAAGCAGAGACCCTTCATTTAATGGATCAAATGAAAGAAATGGGAGTGTTGGTGGGGAAAGGTGGATTCTATGGGAATGTCTTCAGAATCACTCCTCCTCTCTGCTTCACCCTCTCCGACGCTGGTTAG
Protein Sequence
- >AT3G08860.2 MRKLTAVNSLLKRNNYLLPRHGSSQTAAQRTSSVRETETETKLPKMPPFNYSPPPYDGPSTAEIIAKRREFLSPALFHFYNTPLNIVEAKMQYVFDENGRRYLDAFGGIATVSCGHCHPEVVNSVVKQLKLINHSTILYLNHTISDFAEALVSTLPGDLKVVFFTNSGTEANELAMMMARLYTGCNDIVSLRNSYHGNAAATMGATAQSNWKFNVVQSGVHHAINPDPYRGIFGSDGEKYASDVHDLIQFGTSGQVAGFIGESIQGVGGIVELAPGYLPAAYDIVRKAGGVCIADEVQSGFARTGTHFWGFQSHGVIPDIVTMAKGIGNGIPLGAVVTTPEIAGVLSRRSYFNTFGGNPMCTAAGHAVLRVLHEEKLQENANLVGSHLKRRLTLLKNKYELIGDVRGRGLMLGVEFVKDRDLKTPAKAETLHLMDQMKEMGVLVGKGGFYGNVFRITPPLCFTLSDAG
- >AT3G08860.1 MRKLTAVNSLLKRNNYLLPRHGSSQTAAQRTSSVRETETETKLPKMPPFNYSPPPYDGPSTAEIIAKRREFLSPALFHFYNTPLNIVEAKMQYVFDENGRRYLDAFGGIATVSCGHCHPEVVNSVVKQLKLINHSTILYLNHTISDFAEALVSTLPGDLKVVFFTNSGTEANELAMMMARLYTGCNDIVSLRNSYHGNAAATMGATAQSNWKFNVVQSGVHHAINPDPYRGIFGSDGEKYASDVHDLIQFGTSGQVAGFIGESIQGVGGIVELAPGYLPAAYDIVRKAGGVCIADEVQSGFARTGTHFWGFQSHGVIPDIVTMAKGIGNGIPLGAVVTTPEIAGVLSRRSYFNTFGGNPMCTAAGHAVLRVLHEEKLQENANLVGSHLKRRLTLLKNKYELIGDVRGRGLMLGVEFVKDRDLKTPAKAETLHLMDQMKEMGVLVGKGGFYGNVFRITPPLCFTLSDAG