Gene Details:
- Gene ID: AT3G08950
- Gene Symbol: HCC1
- Gene Name: homologue of the copper chaperone SCO1
- Description: electron transport SCO1/SenC family protein;(source:Araport11)
- TAIR Accession: locus:2097673
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005739 — located in — mitochondrion
- GO:0009793 — involved in — embryo development ending in seed dormancy
- GO:0033617 — involved in — mitochondrial cytochrome c oxidase assembly
- GO:0005507 — enables — copper ion binding
Germplasm Phenotype:
- CS66573 — SNAP-tagged HCC1 was able to rescue embryo-lethal phenotype of hcc1-1 homozygous mutants producing plants smaller than transgenic SNAP-tagged HCC1 in wild-type background.
Literature:
- A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. DOI: 10.1104/pp.103.033910 ; PMID: 14730085
- Differential expression of the Arabidopsis cytochrome c genes Cytc-1 and Cytc-2. and meristem-specific expression of the Cytc-1 gene. DOI: 10.1104/pp.105.065920 ; PMID: 16113211
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Gene expression profiling analysis of copper homeostasis in Arabidopsis thaliana. DOI: 10.1016/j.bbrc.2010.01.111 ; PMID: 20117084
- Plants contain two SCO proteins that are differentially involved in cytochrome c oxidase function and copper and redox homeostasis. DOI: 10.1093/jxb/err138 ; PMID: 21543521
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
Sequence:
cDNA Sequence
- >AT3G08950.1 GTAAAACCTCTTTGCACCTCTCAGATTAAAAACCTCAGCTCGCAGGAAAGAAATCAGCGAATTTGTGAACTTCAGAGAAAAATTGGTCGTCAATGGCGTCTGCTCTATGTAGAACTGCAAGCCGTCTTCGTTCCGTTCAACTTTTTCGTCGGATTCGCGTCTCCAGCGATCTACTATCGGCATCGTCTCCTTCTCCGGCGTGCATCTCCGACGCGCTTCGTCATGGAGATTTCTCTCTTCCTCGATCGTTTTTTTCACTTAACTGTGGAATCGAAATGCTGAAAATGGATCAGAGATGTTTGCTGAGTACTTCTGCTTCTGATACTACCTCGAAACATGACTCAGGTAAACCGGAAACAAAATCTTCGGAGAAAAATGAGAAATCTGGAGGATCGGAGAGTTCTGATGGTGGTTCAGATCATAAAAACGAGCGTGCTTCTGGAAAAGACGTTCGTGGAGGGCCGGTTTCATGGATGAGCTTTTTCTTGCTGTTTGCTACTGGAGCTGGATTGGTCTACTATTATGACACACAAAAGAAACGTCATATCGAAGATATAAATAAGAACTCTATAGCCGTCAAGGAGGGGCCATCTGCTGGAAAAGCAGCCATTGGAGGACCATTCAGCCTTATAAGAGACGATGGGAAACGTGTGACGGAGAAAAACTTGATGGGAAAATGGACCATTTTATACTTTGGTTTCACTCATTGTCCCGATATCTGTCCTGACGAACTTATTAAGTTAGCTGCTGCCATTGACAAAATAAAGGAAAATTCGGGAGTAGACGTGGTGCCAGTGTTTATCTCTGTGGACCCTGAAAGAGACACAGTTCAGCAAGTACATGAATATGTCAAAGAATTTCACCCGAAATTGATCGGGTTAACTGGGAGCCCTGAAGAAATCAAATCGGTGGCCCGATCTTACCGGGTTTACTACATGAAGACCGAAGAGGAAGATTCAGACTATCTCGTTGATCACTCTATAGTCATGTACTTGATGAGTCCGGAGATGAATTTTGTGAAATTCTACGGGAAGAATCACGATGTTGACTCGTTGACAGACGGCGTTGTAAAAGAGATCCGTCAGTACCGGAAGTAAAGAACCTTCGAAGTACACTTAGGTGATTAATATACATTATTCCCATTTTTGGAAGCTCATCATTAATAAGGATTTCTCAGAACACGGAGCTGCTTGTGTTTCCTTGAAAAAACATCAGTTTTTGTTGTGGCCGAGCATGCACACAACGGTAGTATCCATACTATAAGGGCATTAAGGGATCAATTGAGATTATTCCGATTACCCGTGTCCCATAAATTGATCACACTTCTTCGTATAGAATTTTAAGGCCTAAATTATCGGCAGTGCTTAAATGTCGAACTAAGAGGCAGTGCTTAATTACCCGTTATTGCTAAATACCATAGTATGTGTTTTTACAAAATCATCATAGTAAAGAGAGTTTACACGA
CDS Sequence
- >AT3G08950.1 ATGGCGTCTGCTCTATGTAGAACTGCAAGCCGTCTTCGTTCCGTTCAACTTTTTCGTCGGATTCGCGTCTCCAGCGATCTACTATCGGCATCGTCTCCTTCTCCGGCGTGCATCTCCGACGCGCTTCGTCATGGAGATTTCTCTCTTCCTCGATCGTTTTTTTCACTTAACTGTGGAATCGAAATGCTGAAAATGGATCAGAGATGTTTGCTGAGTACTTCTGCTTCTGATACTACCTCGAAACATGACTCAGGTAAACCGGAAACAAAATCTTCGGAGAAAAATGAGAAATCTGGAGGATCGGAGAGTTCTGATGGTGGTTCAGATCATAAAAACGAGCGTGCTTCTGGAAAAGACGTTCGTGGAGGGCCGGTTTCATGGATGAGCTTTTTCTTGCTGTTTGCTACTGGAGCTGGATTGGTCTACTATTATGACACACAAAAGAAACGTCATATCGAAGATATAAATAAGAACTCTATAGCCGTCAAGGAGGGGCCATCTGCTGGAAAAGCAGCCATTGGAGGACCATTCAGCCTTATAAGAGACGATGGGAAACGTGTGACGGAGAAAAACTTGATGGGAAAATGGACCATTTTATACTTTGGTTTCACTCATTGTCCCGATATCTGTCCTGACGAACTTATTAAGTTAGCTGCTGCCATTGACAAAATAAAGGAAAATTCGGGAGTAGACGTGGTGCCAGTGTTTATCTCTGTGGACCCTGAAAGAGACACAGTTCAGCAAGTACATGAATATGTCAAAGAATTTCACCCGAAATTGATCGGGTTAACTGGGAGCCCTGAAGAAATCAAATCGGTGGCCCGATCTTACCGGGTTTACTACATGAAGACCGAAGAGGAAGATTCAGACTATCTCGTTGATCACTCTATAGTCATGTACTTGATGAGTCCGGAGATGAATTTTGTGAAATTCTACGGGAAGAATCACGATGTTGACTCGTTGACAGACGGCGTTGTAAAAGAGATCCGTCAGTACCGGAAGTAA
Protein Sequence
- >AT3G08950.1 MASALCRTASRLRSVQLFRRIRVSSDLLSASSPSPACISDALRHGDFSLPRSFFSLNCGIEMLKMDQRCLLSTSASDTTSKHDSGKPETKSSEKNEKSGGSESSDGGSDHKNERASGKDVRGGPVSWMSFFLLFATGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGKAAIGGPFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPVFISVDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDHSIVMYLMSPEMNFVKFYGKNHDVDSLTDGVVKEIRQYRK