Gene Details:

• Gene ID: AT3G09600
• Gene Symbol: LCL5, RVE8
• Gene Name: LHY-CCA1-LIKE5, REVEILLE 8
• Description: Homeodomain-like superfamily protein;(source:Araport11)
• TAIR Accession: locus:2075049
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G09600.1     AT3G09600.2     AT3G09600.5     AT3G09600.4     AT3G09600.9     AT3G09600.8     AT3G09600.3     AT3G09600.7     AT3G09600.6

Gene Ontology:

• GO:0042753  — acts upstream of or within — positive regulation of circadian rhythm
• GO:0043565  — enables — sequence-specific DNA binding
• GO:0006355  — acts upstream of or within — regulation of DNA-templated transcription
• GO:0048573  — acts upstream of or within — photoperiodism, flowering
• GO:0005634  — located in — nucleus
• GO:0045944  — acts upstream of or within — positive regulation of transcription by RNA polymerase II
• GO:0032922  — acts upstream of or within — circadian regulation of gene expression
• GO:0042752  — acts upstream of or within — regulation of circadian rhythm
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0010628  — acts upstream of or within — positive regulation of gene expression

Germplasm Phenotype:

• SALK_053482  — Involved in heat shock response.

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis.   DOI:  10.1074/jbc.M313350200 ;  PMID:  14722088
• ABA activates ADPR cyclase and cADPR induces a subset of ABA-responsive genes in Arabidopsis.   DOI:  10.1111/j.1365-313X.2004.02055.x ;  PMID:  15086800
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103
• Identification of new gene expression regulators specifically expressed during plant seed maturation.   DOI:  10.1093/jxb/erj138 ;  PMID:  16606634
• Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis.   DOI:  10.1093/nar/gkl204 ;  PMID:  16845059
• Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response.   DOI:  10.1007/s00438-006-0177-x ;  PMID:  17061125
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Changes in the gene expression profile of Arabidopsis thaliana after infection with Tobacco etch virus.   DOI:  10.1186/1743-422X-5-92 ;  PMID:  18684336
• Functional implication of the MYB transcription factor RVE8/LCL5 in the circadian control of histone acetylation.   DOI:  10.1111/j.1365-313X.2011.04484.x ;  PMID:  21205033
• REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock.   DOI:  10.1371/journal.pgen.1001350 ;  PMID:  21483796
• Histone acetylation and the circadian clock: a role for the MYB transcription factor RVE8/LCL5.   DOI:  10.4161/psb.6.4.14837 ;  PMID:  21474993
• Accurate timekeeping is controlled by a cycling activator in Arabidopsis.   DOI:  10.7554/eLife.00473 ;  PMID:  23638299
• Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-13-229 ;  PMID:  24377444
• LNK1 and LNK2 are transcriptional coactivators in the Arabidopsis circadian oscillator.   DOI:  10.1105/tpc.114.126573 ;  PMID:  25012192
• LNK1 and LNK2 recruitment to the evening element require morning expressed circadian related MYB-like transcription factors.   DOI:  10.1080/15592324.2015.1010888 ;  PMID:  25848708
• The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size.   DOI:  10.1104/pp.17.00109 ;  PMID:  28254761
• Multiple feedback loops of the Arabidopsis circadian clock provide rhythmic robustness across environmental conditions.   DOI:  10.1073/pnas.1805524115 ;  PMID:  29915068
• Transcriptional Profiling Reveals a Time-of-Day-Specific Role of REVEILLE 4/8 in Regulating the First Wave of Heat Shock-Induced Gene Expression in Arabidopsis.   DOI:  10.1105/tpc.19.00519 ;  PMID:  31358650
• Posttranslational regulation of multiple clock-related transcription factors triggers cold-inducible gene expression in Arabidopsis.   DOI:  10.1073/pnas.2021048118 ;  PMID:  33649234
• BBX19 fine-tunes the circadian rhythm by interacting with PSEUDO-RESPONSE REGULATOR proteins to facilitate their repressive effect on morning-phased clock genes.   DOI:  10.1093/plcell/koab133 ;  PMID:  34164694
• SWELLMAP 2, a phyB-Interacting Splicing Factor, Negatively Regulates Seedling Photomorphogenesis in Arabidopsis.   DOI:  10.3389/fpls.2022.836519 ;  PMID:  35222493
• The 5'-3' mRNA Decay Pathway Modulates the Plant Circadian Network in Arabidopsis.   DOI:  10.1093/pcp/pcac126 ;  PMID:  36066193
• B-Box proteins BBX28 and BBX29 interplay with PSEUDO-RESPONSE REGULATORS to fine-tune circadian clock in Arabidopsis.   DOI:  10.1111/pce.14648 ;  PMID:  37312621
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103
• Functional implication of the MYB transcription factor RVE8/LCL5 in the circadian control of histone acetylation.   DOI:  10.1111/j.1365-313X.2011.04484.x ;  PMID:  21205033

Sequence: