Gene Details:
- Gene ID: AT3G09720
- Gene Symbol: AtRH57, RH57
- Gene Name: RNA helicase 57
- Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)
- TAIR Accession: locus:2075034
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0005634 — located in — nucleus
- GO:0030490 — involved in — maturation of SSU-rRNA
- GO:0003724 — enables — RNA helicase activity
Germplasm Phenotype:
- gcc7 — high-glucosinolate chemotype caused by overexpression of IQD1 (At3g09710)
Literature:
- Arabidopsis IQD1, a novel calmodulin-binding nuclear protein, stimulates glucosinolate accumulation and plant defense. DOI: 10.1111/j.1365-313X.2005.02435.x ; PMID: 15960618
- Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes. DOI: 10.1016/j.cub.2010.01.051 ; PMID: 20226671
- Recruitment of Arabidopsis RNA Helicase AtRH9 to the Viral Replication Complex by Viral Replicase to Promote Turnip Mosaic Virus Replication. DOI: 10.1038/srep30297 ; PMID: 27456972
Sequence:
cDNA Sequence
- >AT3G09720.1 GTAAAACCCAAAATCTGCAAGAGTCTCTCTGGTTCTTCGATTCTTCTCGGTATCTATTCGCCGTCGTCAGTGTCATCGCCGGCGTTTTTAATTTCGTCTCTATTGTTACCATTATTGCTGCCTTTTCCTCTCCTCCGGAAACGCTCTCTTTCTCTATTTAGATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAACCTCAAATTTTGTCTTTTATATTTCTTGTTGTTGTTACATTGATGAATTAGTCTTGGTCTTTTGGATCCAAAACACTTTACACTGGCTAGAATCGGGAATCTAGTAGAATCGAACTTAGTTGTCACTTGGATCGTACTACGAAATACATATGTAACTCAAACCTAGTTACTATTCGATTGTGAGACTTCCGGTTTTTCATGTCGGATTCAATGATTTCTTAAGATGCATTATACCATAAGTTTTGGTTTGGTATAACTTTAAGAGCGATGTATATTATTTGGGTTGGGTTTAATCAAACCGGTTTTCTCCGAATTGGATAATACTTAAGTTCTTGCTTAGCTGGGGCATCACTCCAAATAATTATTGGAATTAAAGAGTAATAAATATCAATGATCTTCTTTGTTAAAATAAACGAATCATGACAACCAAATATTAGCTCAAAGTTAAGAAGGAAAGAGAAAAAACAAAACAATTGATTACATATTTTTCTAATTTTACAAAATTTGGGACAATAAAATCTATCAAACAATCTTAATATCATTTGTTCATAAGAAACAAAAAAAATTAGATTGGACCGACGGAGAGAGAGAATGATCCAAAACTCTGACTAACAAAACACAAGACGTGTGCATTATGTATATGTCTTTTCTAGATAATCAATTCCATTTTGAGGTTATTAACTAATATACAAAACAATACTTATGATTTAC
- >AT3G09720.2 GTAAAACCCAAAATCTGCAAGAGTCTCTCTGGTTCTTCGATTCTTCTCGGTATCTATTCGCCGTCGTCAGTGTCATCGCCGGCGTTTTTAATTTCGTCTCTATTGTTACCATTATTGCTGCCTTTTCCTCTCCTCCGGAAACGCTCTCTTTCTCTATTTAGATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAACCTCAAATTTTGTCTTTTATATTTCTTGTTGTTGTTACATTGATGAATTAGTCTTGGTCTTTTGGATCCAAAACACTTTACACTGGCTAGAATCGGGAATCTAGTAGAATCGAACTTAGTTGTCACTTGGATCGTACTACGAAATACATATGTAACTCAAACCTAGTTACTATTCGATTGTGAGACTTCCGGTTTTTCATGTCGGATTCAATGATTTCTTAAGATGCATTATACCATAAGTTTTGGTTTGGTATAACTTTAAGAGCGATGTATATTATTTGGGTTGGGTTTAATCAAACCGGTTTTCTCCGAATTGGATAATACTTAAGTTCTTGCTTAGCTGGGGCATCACTCCAAATAATTATTGGAATTAAAGAGTAATAAATATCAATGATCTTCTTTGTTAAAATAAACGAATCATGACAACCAAATATTAGCTCAAAGTTAAGAAGGAAAGAGAAAAAACAAAACAATTGATTACATATTTTTCTAATTTTACAAAATTTGGGACAATAAAATCTATCAAACAATCTTAATATCATTTGTTCATAAGAAACAAAAAAAATTAGATTGGACCGACGGAGAGAGAGAATGATCCAAAACTCTGACTAACAAAACACAAGACGTGTGCATTATGTATATGTCTTTTCTAGATAATCAATTCCATTTTGAGGTTATTAACTAATATACAAAACAATACTTATGATTTAC
CDS Sequence
- >AT3G09720.1 ATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAA
- >AT3G09720.2 ATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAA
Protein Sequence
- >AT3G09720.1 MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTDE
- >AT3G09720.2 MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTDE