Gene Details:

  • Gene ID: AT3G09720
  • Gene Symbol: AtRH57, RH57
  • Gene Name: RNA helicase 57
  • Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)
  • TAIR Accession: locus:2075034
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Gene Ontology:

  • GO:0016070  — acts upstream of or within — RNA metabolic process
  • GO:0005634  — located in — nucleus
  • GO:0030490  — involved in — maturation of SSU-rRNA
  • GO:0003724  — enables — RNA helicase activity

Germplasm Phenotype:

  • gcc7  — high-glucosinolate chemotype caused by overexpression of IQD1 (At3g09710)

Literature:

Sequence:

cDNA Sequence
  • >AT3G09720.1 GTAAAACCCAAAATCTGCAAGAGTCTCTCTGGTTCTTCGATTCTTCTCGGTATCTATTCGCCGTCGTCAGTGTCATCGCCGGCGTTTTTAATTTCGTCTCTATTGTTACCATTATTGCTGCCTTTTCCTCTCCTCCGGAAACGCTCTCTTTCTCTATTTAGATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAACCTCAAATTTTGTCTTTTATATTTCTTGTTGTTGTTACATTGATGAATTAGTCTTGGTCTTTTGGATCCAAAACACTTTACACTGGCTAGAATCGGGAATCTAGTAGAATCGAACTTAGTTGTCACTTGGATCGTACTACGAAATACATATGTAACTCAAACCTAGTTACTATTCGATTGTGAGACTTCCGGTTTTTCATGTCGGATTCAATGATTTCTTAAGATGCATTATACCATAAGTTTTGGTTTGGTATAACTTTAAGAGCGATGTATATTATTTGGGTTGGGTTTAATCAAACCGGTTTTCTCCGAATTGGATAATACTTAAGTTCTTGCTTAGCTGGGGCATCACTCCAAATAATTATTGGAATTAAAGAGTAATAAATATCAATGATCTTCTTTGTTAAAATAAACGAATCATGACAACCAAATATTAGCTCAAAGTTAAGAAGGAAAGAGAAAAAACAAAACAATTGATTACATATTTTTCTAATTTTACAAAATTTGGGACAATAAAATCTATCAAACAATCTTAATATCATTTGTTCATAAGAAACAAAAAAAATTAGATTGGACCGACGGAGAGAGAGAATGATCCAAAACTCTGACTAACAAAACACAAGACGTGTGCATTATGTATATGTCTTTTCTAGATAATCAATTCCATTTTGAGGTTATTAACTAATATACAAAACAATACTTATGATTTAC
  • >AT3G09720.2 GTAAAACCCAAAATCTGCAAGAGTCTCTCTGGTTCTTCGATTCTTCTCGGTATCTATTCGCCGTCGTCAGTGTCATCGCCGGCGTTTTTAATTTCGTCTCTATTGTTACCATTATTGCTGCCTTTTCCTCTCCTCCGGAAACGCTCTCTTTCTCTATTTAGATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAACCTCAAATTTTGTCTTTTATATTTCTTGTTGTTGTTACATTGATGAATTAGTCTTGGTCTTTTGGATCCAAAACACTTTACACTGGCTAGAATCGGGAATCTAGTAGAATCGAACTTAGTTGTCACTTGGATCGTACTACGAAATACATATGTAACTCAAACCTAGTTACTATTCGATTGTGAGACTTCCGGTTTTTCATGTCGGATTCAATGATTTCTTAAGATGCATTATACCATAAGTTTTGGTTTGGTATAACTTTAAGAGCGATGTATATTATTTGGGTTGGGTTTAATCAAACCGGTTTTCTCCGAATTGGATAATACTTAAGTTCTTGCTTAGCTGGGGCATCACTCCAAATAATTATTGGAATTAAAGAGTAATAAATATCAATGATCTTCTTTGTTAAAATAAACGAATCATGACAACCAAATATTAGCTCAAAGTTAAGAAGGAAAGAGAAAAAACAAAACAATTGATTACATATTTTTCTAATTTTACAAAATTTGGGACAATAAAATCTATCAAACAATCTTAATATCATTTGTTCATAAGAAACAAAAAAAATTAGATTGGACCGACGGAGAGAGAGAATGATCCAAAACTCTGACTAACAAAACACAAGACGTGTGCATTATGTATATGTCTTTTCTAGATAATCAATTCCATTTTGAGGTTATTAACTAATATACAAAACAATACTTATGATTTAC
CDS Sequence
  • >AT3G09720.1 ATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAA
  • >AT3G09720.2 ATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAA
Protein Sequence
  • >AT3G09720.1 MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTDE
  • >AT3G09720.2 MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTDE