Gene Details:
- Gene ID: AT3G11710
- Gene Symbol: ATKRS-1
- Gene Name: lysyl-tRNA synthetase 1
- Description: lysyl-tRNA synthetase 1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana. DOI: 10.1073/pnas.0504682102 ; PMID: 16251277
- Requirement of aminoacyl-tRNA synthetases for gametogenesis and embryo development in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02580.x ; PMID: 16297076
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- γ-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots. DOI: 10.1111/pce.12033 ; PMID: 23148892
- A proteomics approach identifies novel proteins involved in gravitropic signal transduction. DOI: 10.3732/ajb.1200339 ; PMID: 23281391
Sequence:
cDNA Sequence
- >AT3G11710.1 GTCGCCGTCTTTCTCATAGACTTAACATTTCATATAGAGAAACTTGAAACAACAATCTGAGCAAAGAGCGTTTTATCTTGTTGATTTTGGAATCTCCATTACGATGGAAGGTGCGGCTGATCAAACTACGAAAGCGTTATCTGAATTAGCCATGGATTCTTCTACCACCTTGAATGCTGCTGAGTCTAGCGCTGGTGATGGAGCTGGACCTCGGAGTAAAAATGCTTTGAAGAAGGAACAGAAAATGAAGCAGAAAGAGGAAGAGAAGAGACGAAAGGACGAAGAGAAAGCTGAAAAGGCTAAACAAGCACCTAAAGCAAGCTCCCAGAAGGCAGTGGCAGCAGATGATGAAGAGATGGATGCAACGCAATACTATGAGAACAGATTGAAATATCTTGCGGCTGAGAAGGCTAAAGGGGAGAATCCATATCCTCACAAGTTCGCTGTGTCAATGTCGATTCCTAAATACATTGAGACGTATGGTAGTTTGAACAATGGAGATCATGTTGAAAACGCTGAGGAGTCTTTAGCTGGGCGGATAATGAGCAAGCGATCTTCCTCTTCCAAGCTCTTCTTCTATGATCTACACGGTGATGATTTCAAGGTCCAAGTCATGGCTGATGCAAGTAAGTCAGGATTGGATGAAGCTGAGTTCTTAAAGCTCCATTCGAATGCTAAGCGTGGTGATATTGTTGGAGTCATTGGGTTTCCAGGAAAAACTAAGAGGGGAGAATTGAGTATCTTTCCCCGATCATTTATTCTTCTGTCCCATTGCCTCCACATGATGCCGAGAAAGGCTGATAATGTTAATGCAAAGAAACCTGAAATCTGGGTTCCAGGTCAAACGAGAAATCCTGAAGCATATGTTCTGAAAGACCAGGAATCAAGATATCGTCAGCGTCATCTTGATATGATTTTGAACGTGGAGGTTCGTCAGATATTCAGGACTAGAGCTAAAATCATCTCCTATGTCCGCAGATTCCTCGACAACAAAAATTTCTTGGAGGTCGAGACACCTATGATGAACATGATTGCTGGTGGAGCAGCTGCTAGACCTTTTGTGACACATCACAATGATCTAGATATGAGGCTGTACATGCGAATCGCACCTGAACTCTATCTCAAGCAACTTATTGTTGGTGGCTTGGAACGTGTTTACGAGATAGGAAAGCAATTCAGAAACGAGGGTATAGACCTGACCCACAATCCGGAGTTCACCACTTGCGAGTTCTATATGGCTTTTGCAGACTACAATGACCTGATGGAAATGACTGAGGTTATGTTGAGTGGCATGGTTAAGGAATTAACAGGTGGTTATAAAATCAAGTATAATGCTAATGGGTATGACAAGGATCCAATTGAAATCGACTTTACTCCACCATTCAGGAGGATTGAGATGATAGGAGAGTTAGAGAAGGTTGCTAAGCTCAATATACCAAAAGACTTGGCTAGCGAAGAAGCTAACAAGTATCTGATTGATGCATGTGCGAGGTTTGATGTCAAATGCCCTCCTCCTCAGACAACAGCTCGTCTGTTAGATAAACTTGTTGGAGAATTTCTGGAACCGACATGTGTGAACCCAACTTTCATCATCAACCAGCCCGAGATCATGAGTCCTTTGGCTAAATGGCACAGATCGAAGAGTGGATTGACAGAGAGATTCGAGCTGTTCATCAACAAACATGAACTCTGCAATGCCTACACGGAGCTAAACGATCCTGTGGTACAGCGCCAGCGTTTTGCTGATCAGCTCAAGGATCGACAGTCTGGAGACGATGAAGCGATGGCTTTAGATGAAACATTTTGTAATGCTTTAGAATATGGGTTGGCTCCTACAGGTGGCTGGGGATTAGGAATAGACAGACTCTCTATGCTTTTGACCGACTCACTGAACATCAAGGAGGTTCTTTTCTTCCCGGCAATGAGGCCACCACAGGAGGAGTCAGCAGCCGCTCAAGCTCCTTTAACAGAAGAGAAGAAATAAGGAGTCTACACAAGTTTTCTGACTAAGCTTAGTCAATTCGCTATTATGCACTCTGTTCTCAAGTTACTTGTAATTGCAGACCATATTTTTCAAAAAAAAAATACCAATTAATTATTATCAAAAACCTTTGTAAGACTTTTTTGCAATTAGTAGTGATTTCACTTATATTGAAGGGCCTTTTTTAAGAATTAGTGTCCATGTATTTGTATAACATGAGCTTTCTTAAACGGTCTAAACATGGAAGACCGGTAAGCTAAGGGTATATGAATGGGAGACGAGTAGTAGGTGGTTCTTCTAGTGTGTTATTGCCG
CDS Sequence
- >AT3G11710.1 ATGGAAGGTGCGGCTGATCAAACTACGAAAGCGTTATCTGAATTAGCCATGGATTCTTCTACCACCTTGAATGCTGCTGAGTCTAGCGCTGGTGATGGAGCTGGACCTCGGAGTAAAAATGCTTTGAAGAAGGAACAGAAAATGAAGCAGAAAGAGGAAGAGAAGAGACGAAAGGACGAAGAGAAAGCTGAAAAGGCTAAACAAGCACCTAAAGCAAGCTCCCAGAAGGCAGTGGCAGCAGATGATGAAGAGATGGATGCAACGCAATACTATGAGAACAGATTGAAATATCTTGCGGCTGAGAAGGCTAAAGGGGAGAATCCATATCCTCACAAGTTCGCTGTGTCAATGTCGATTCCTAAATACATTGAGACGTATGGTAGTTTGAACAATGGAGATCATGTTGAAAACGCTGAGGAGTCTTTAGCTGGGCGGATAATGAGCAAGCGATCTTCCTCTTCCAAGCTCTTCTTCTATGATCTACACGGTGATGATTTCAAGGTCCAAGTCATGGCTGATGCAAGTAAGTCAGGATTGGATGAAGCTGAGTTCTTAAAGCTCCATTCGAATGCTAAGCGTGGTGATATTGTTGGAGTCATTGGGTTTCCAGGAAAAACTAAGAGGGGAGAATTGAGTATCTTTCCCCGATCATTTATTCTTCTGTCCCATTGCCTCCACATGATGCCGAGAAAGGCTGATAATGTTAATGCAAAGAAACCTGAAATCTGGGTTCCAGGTCAAACGAGAAATCCTGAAGCATATGTTCTGAAAGACCAGGAATCAAGATATCGTCAGCGTCATCTTGATATGATTTTGAACGTGGAGGTTCGTCAGATATTCAGGACTAGAGCTAAAATCATCTCCTATGTCCGCAGATTCCTCGACAACAAAAATTTCTTGGAGGTCGAGACACCTATGATGAACATGATTGCTGGTGGAGCAGCTGCTAGACCTTTTGTGACACATCACAATGATCTAGATATGAGGCTGTACATGCGAATCGCACCTGAACTCTATCTCAAGCAACTTATTGTTGGTGGCTTGGAACGTGTTTACGAGATAGGAAAGCAATTCAGAAACGAGGGTATAGACCTGACCCACAATCCGGAGTTCACCACTTGCGAGTTCTATATGGCTTTTGCAGACTACAATGACCTGATGGAAATGACTGAGGTTATGTTGAGTGGCATGGTTAAGGAATTAACAGGTGGTTATAAAATCAAGTATAATGCTAATGGGTATGACAAGGATCCAATTGAAATCGACTTTACTCCACCATTCAGGAGGATTGAGATGATAGGAGAGTTAGAGAAGGTTGCTAAGCTCAATATACCAAAAGACTTGGCTAGCGAAGAAGCTAACAAGTATCTGATTGATGCATGTGCGAGGTTTGATGTCAAATGCCCTCCTCCTCAGACAACAGCTCGTCTGTTAGATAAACTTGTTGGAGAATTTCTGGAACCGACATGTGTGAACCCAACTTTCATCATCAACCAGCCCGAGATCATGAGTCCTTTGGCTAAATGGCACAGATCGAAGAGTGGATTGACAGAGAGATTCGAGCTGTTCATCAACAAACATGAACTCTGCAATGCCTACACGGAGCTAAACGATCCTGTGGTACAGCGCCAGCGTTTTGCTGATCAGCTCAAGGATCGACAGTCTGGAGACGATGAAGCGATGGCTTTAGATGAAACATTTTGTAATGCTTTAGAATATGGGTTGGCTCCTACAGGTGGCTGGGGATTAGGAATAGACAGACTCTCTATGCTTTTGACCGACTCACTGAACATCAAGGAGGTTCTTTTCTTCCCGGCAATGAGGCCACCACAGGAGGAGTCAGCAGCCGCTCAAGCTCCTTTAACAGAAGAGAAGAAATAA
Protein Sequence
- >AT3G11710.1 MEGAADQTTKALSELAMDSSTTLNAAESSAGDGAGPRSKNALKKEQKMKQKEEEKRRKDEEKAEKAKQAPKASSQKAVAADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIPKYIETYGSLNNGDHVENAEESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLDEAEFLKLHSNAKRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADNVNAKKPEIWVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYDKDPIEIDFTPPFRRIEMIGELEKVAKLNIPKDLASEEANKYLIDACARFDVKCPPPQTTARLLDKLVGEFLEPTCVNPTFIINQPEIMSPLAKWHRSKSGLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCNALEYGLAPTGGWGLGIDRLSMLLTDSLNIKEVLFFPAMRPPQEESAAAQAPLTEEKK