Gene Details:
- Gene ID: AT3G15790
- Gene Symbol: ATMBD11, MBD11
- Gene Name: methyl-CPG-binding domain 11
- Description: methyl-CPG-binding domain 11;(source:Araport11)
- TAIR Accession: locus:2093197
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0046394 — acts upstream of or within — carboxylic acid biosynthetic process
- GO:0008327 — enables — methyl-CpG binding
- GO:1901566 — acts upstream of or within — organonitrogen compound biosynthetic process
- GO:0009812 — acts upstream of or within — flavonoid metabolic process
- GO:0019760 — acts upstream of or within — glucosinolate metabolic process
- GO:0009611 — acts upstream of or within — response to wounding
- GO:0005634 — located in — nucleus
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0071396 — acts upstream of or within — cellular response to lipid
- GO:0044085 — acts upstream of or within — cellular component biogenesis
- GO:0009753 — acts upstream of or within — response to jasmonic acid
- GO:0009790 — acts upstream of or within — embryo development
- GO:1901701 — acts upstream of or within — cellular response to oxygen-containing compound
- GO:0007049 — acts upstream of or within — cell cycle
- GO:0033993 — acts upstream of or within — response to lipid
- GO:0019748 — acts upstream of or within — secondary metabolic process
Literature:
- Characterization of Arabidopsis thaliana methyl-CpG-binding domain (MBD) proteins. DOI: 10.1046/j.1365-313x.2003.01756.x ; PMID: 12787239
- Ten members of the Arabidopsis gene family encoding methyl-CpG-binding domain proteins are transcriptionally active and at least one, AtMBD11, is crucial for normal development. DOI: 10.1093/nar/gkg735 ; PMID: 12954765
- Evolutionary divergence of monocot and dicot methyl-CpG-binding domain proteins. DOI: 10.1104/pp.105.060566 ; PMID: 15888682
- Methyl-CpG-binding domain proteins in plants: interpreters of DNA methylation. DOI: 10.1016/j.tplants.2006.12.004 ; PMID: 17208509
- Differentiation of Arabidopsis guard cells: analysis of the networks incorporating the basic helix-loop-helix transcription factor, FAMA. DOI: 10.1104/pp.110.167718 ; PMID: 21245191
- Characterization of Arabidopsis thaliana methyl-CpG-binding domain (MBD) proteins. DOI: 10.1046/j.1365-313x.2003.01756.x ; PMID: 12787239
Sequence:
cDNA Sequence
- >AT3G15790.2 CGAACATCCGAGTCGACTTAACACCTTTTGATCAAGGCTTTAACGTGTCGTTGTTACCATAGAATATAGATGATAGAGCGCATTTTATATCACTGGATATAGACACGTGGTTAAACTTAATTGGGTTGTTAGTTAAGTTGTTGTGCTACCTCCAAGTGACTTTATCATATACTCTGTGTGTTTCTGGTAGTAAAAAAAGGTCTAAAACCATAGTGTTAAGCAAAAGAGAAAAAGAAGAGCAGAGCAAAATCCCTAAAATTTTAAACTCTGTTTTGCTTTCCGACAATCAAACCCTAGGGGTTGCTAAAGGGAAAGGAGAGAGATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAGCCCTGTTCTGCTCTGCTTCTGTTAGCTCATGAAACTGTAAGTCAGTTGTTTCTATCAATCTATTGAAGTATATGGTTTCCTTTTTGCTTCCTACTCGGAGCATTATCGCGGTGAAAGGTGTTGTTAGGCTGAGATATGTATTATGAGATATGTGCAAGTTCTGTTTGGTTGTAAGGTTATGTAGAGGATATATTATTGACTCTTCTCTAAAACCATTGCAATCACTAGGTTTGATGTTTTATCTTTCTGCTACAATCTTTAGTCATTTTCGTATGGATGGACAATCAAGTTATGAACAAGTCAGATTAAAGATCCACACATAGATTAAT
- >AT3G15790.3 CGAACATCCGAGTCGACTTAACACCTTTTGATCAAGGCTTTAACGTGTCGTTGTTACCATAGAATATAGATGATAGAGCGCATTTTATATCACTGGATATAGACACGTGGTTAAACTTAATTGGGTTGTTAGTTAAGTTGTTGTGCTACCTCCAAGTGACTTTATCATATACTCTGTGTGTTTCTGGTAGTAAAAAAAGGTCTAAAACCATAGTGTTAAGCAAAAGAGAAAAAGAAGAGCAGAGCAAAATCCCTAAAATTTTAAACTCTGTTTTGCTTTCCGACAATCAAACCCTAGGGGTTGCTAAAGGGAAAGGAGAGAGATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAGCCCTGTTCTGCTCTGCTTCTGTTAGCTCATGAAACTGTAAGTCAGTTGTTTCTATCAATCTATTGAAGTATATGGTTTCCTTTTTGCTTCCTACTCGGAGCATTATCGCGGTGAAAGGTGTTGTTAGGCTGAGATATGTATTATGAGATATGTGCAAGTTCTGTTTGGTTGTAAGGTTATGTAGAGGATATATTATTGACTCTTCTCTAAAACCATTGCAATCACTAGGTTTGATGTTTTATCTTTCTGCTACAATCTTTAGTCATTTTCGTATGGATGGACAATCAAGTTATGAACAAGTCAGATTAAAGATCCACACATAGATTAAT
- >AT3G15790.1 CGAACATCCGAGTCGACTTAACACCTTTTGATCAAGGCTTTAACGTGTCGTTGTTACCATAGAATATAGATGATAGAGCGCATTTTATATCACTGGATATAGACACGTGGTTAAACTTAATTGGGTTGTTAGTTAAGTTGTTGTGCTACCTCCAAGTGACTTTATCATATACTCTGTGTGTTTCTGGTAGTAAAAAAAGGTCTAAAACCATAGTGTTAAGCAAAAGAGAAAAAGAAGAGCAGAGCAAAATCCCTAAAATTTTAAACTCTGTTTTGCTTTCCGACAATCAAACCCTAGGGGTTGCTAAAGGGAAAGGAGAGAGATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAGCCCTGTTCTGCTCTGCTTCTGTTAGCTCATGAAACTGTAAGTCAGTTGTTTCTATCAATCTATTGAAGTATATGGTTTCCTTTTTGCTTCCTACTCGGAGCATTATCGCGGTGAAAGGTGTTGTTAGGCTGAGATATGTATTATGAGATATGTGCAAGTTCTGTTTGGTTGTAAGGTTATGTAGAGGATATATTATTGACTCTTCTCTAAAACCATTGCAATCACTAGGTTTGATGTTTTATCTTTCTGCTACAATCTTTAGTCATTTTCGTATGGATGGACAATCAAGTTATGAACAAGTCAGATTAAAGATCCACACATAGATTAAT
CDS Sequence
- >AT3G15790.2 ATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAG
- >AT3G15790.3 ATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAG
- >AT3G15790.1 ATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAG
Protein Sequence
- >AT3G15790.2 MGGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGEATG
- >AT3G15790.3 MGGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGEATG
- >AT3G15790.1 MGGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGEATG