Gene Details:
- Gene ID: AT3G15820
- Gene Symbol: ROD1
- Gene Name: REDUCED OLEATE DESATURATION 1
- Description: phosphatidic acid phosphatase-related / PAP2-like protein;(source:Araport11)
- TAIR Accession: locus:2093257
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0004142 — enables — diacylglycerol cholinephosphotransferase activity
- GO:0046470 — acts upstream of or within — phosphatidylcholine metabolic process
Germplasm Phenotype:
- rod1 — decrease in 18:2 and 18:3 polyunsaturated fatty acids and a concomitant increase in 18:1 relative to wildtype
Literature:
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Acyl editing and headgroup exchange are the major mechanisms that direct polyunsaturated fatty acid flux into triacylglycerols. DOI: 10.1104/pp.112.204438 ; PMID: 22932756
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Mutants of Arabidopsis with alterations in seed lipid fatty acid composition. DOI: 10.1007/BF00224392 ; PMID: 24220901
- The Plastid Lipase PLIP1 Is Critical for Seed Viability in diacylglycerol acyltransferase1 Mutant Seed. DOI: 10.1104/pp.19.00600 ; PMID: 31221730
Sequence:
cDNA Sequence
- >AT3G15820.1 GCTGCTTTGGATGACGAGATAGTTTTTTTTTTACTCGACACATCATACAAGACCTTCGTAAGTATCTGTAATACACGAATCATTAATACATAACACGAATAATGCATTACTATAGTTTTGAGAATCTCATTCTCATACTTCTGTCTCTCTTGTTGTCGAAGAATATCACACTTAACATATAAAAAGAACAACATGTCAGTACACAAAGGTAAAGCCCACCAAAGAGAGAAAAGAAAACAAGACTTAACTATAACAATAAATTTAATGTCGCTCTCAAAACTCATTTTTTTCATATGAATTTTCTAACACAAACAATTTTCCTTGGAAATCTCCGCCTTGTATCTCTTATATAACTCATCTCTCTATACTCCGAACATGTCCCTCTCCGTTAACCTTAACGGCCATGTCAGCCGCCGCAGCTGAAACCGACGTCTCTCTCCGTCGCAGATCTAACTCTCTTAACGGAAACCACACTAACGGCGTCGCCATTGACGGAACCCTAGACAACAACAACCGTCGCGTCGGAGATACAAACACTCACATGGATATATCTGCTAAGAAAACTGACAACGGCTACGCCAATGGTGTCGGAGGAGGAGGATGGAGAAGCAAAGCGTCGTTCACGACGTGGACGGCGCGTGATATCGTCTACGTGGTGAGATACCATTGGATACCGTGCATGTTCGCTGCCGGACTTCTGTTCTTCATGGGCGTGGAGTACACGCTTCAGATGATTCCCGCGAGATCTGAGCCGTTCGATCTTGGGTTTGTGGTCACGCGCTCTTTGAATCGCGTATTAGCATCTTCACCGGATCTTAACACTGTTTTAGCCGCACTAAACACGGTGTTCGTAGGGATGCAAACAACGTATATTGTATGGACATGGTTAGTGGAAGGACGAGCACGAGCCACCATCGCGGCTTTATTCATGTTCACTTGTCGCGGCATTCTCGGCTACTCTACTCAGCTTCCTCTCCCTCAGGACTTTCTAGGATCAGGGGTTGATTTTCCGGTGGGAAATGTCTCTTTCTTCCTCTTCTTCTCTGGCCATGTCGCCGGCTCGATGATCGCATCATTGGACATGAGAAGAATGCAGAGGTTGAGACTTGCAATGGTCTTTGACATCCTCAATGTATTACAGTCGATCAGACTGCTCGGTACAAGAGGACATTACACAATCGACCTTGCGGTTGGAGTTGGCGCTGGGATTCTCTTCGACTCATTGGCCGGAAAGTACGAAGAGATGATGAGCAAGAGACATTTAGGCACTGGTTTTAGTTTGATTTCGAAAGACTCTCTAGTCAATTAAATTTGTTTTCTATCAGAATGTTTAGTTGAGTTGAATCTAGCGTAATGAATTTTTTTGTTTTTCTTTGAAATGGTTCTACTTGACTACCGTTATTTGAACCTAACTAAGTGTGATCAATCTTATGTTAAGGGGTATTACATAGTCTATTTGAAATTCATAGGATCTACACTATATATTCA
CDS Sequence
- >AT3G15820.1 ATGTCAGCCGCCGCAGCTGAAACCGACGTCTCTCTCCGTCGCAGATCTAACTCTCTTAACGGAAACCACACTAACGGCGTCGCCATTGACGGAACCCTAGACAACAACAACCGTCGCGTCGGAGATACAAACACTCACATGGATATATCTGCTAAGAAAACTGACAACGGCTACGCCAATGGTGTCGGAGGAGGAGGATGGAGAAGCAAAGCGTCGTTCACGACGTGGACGGCGCGTGATATCGTCTACGTGGTGAGATACCATTGGATACCGTGCATGTTCGCTGCCGGACTTCTGTTCTTCATGGGCGTGGAGTACACGCTTCAGATGATTCCCGCGAGATCTGAGCCGTTCGATCTTGGGTTTGTGGTCACGCGCTCTTTGAATCGCGTATTAGCATCTTCACCGGATCTTAACACTGTTTTAGCCGCACTAAACACGGTGTTCGTAGGGATGCAAACAACGTATATTGTATGGACATGGTTAGTGGAAGGACGAGCACGAGCCACCATCGCGGCTTTATTCATGTTCACTTGTCGCGGCATTCTCGGCTACTCTACTCAGCTTCCTCTCCCTCAGGACTTTCTAGGATCAGGGGTTGATTTTCCGGTGGGAAATGTCTCTTTCTTCCTCTTCTTCTCTGGCCATGTCGCCGGCTCGATGATCGCATCATTGGACATGAGAAGAATGCAGAGGTTGAGACTTGCAATGGTCTTTGACATCCTCAATGTATTACAGTCGATCAGACTGCTCGGTACAAGAGGACATTACACAATCGACCTTGCGGTTGGAGTTGGCGCTGGGATTCTCTTCGACTCATTGGCCGGAAAGTACGAAGAGATGATGAGCAAGAGACATTTAGGCACTGGTTTTAGTTTGATTTCGAAAGACTCTCTAGTCAATTAA
Protein Sequence
- >AT3G15820.1 MSAAAAETDVSLRRRSNSLNGNHTNGVAIDGTLDNNNRRVGDTNTHMDISAKKTDNGYANGVGGGGWRSKASFTTWTARDIVYVVRYHWIPCMFAAGLLFFMGVEYTLQMIPARSEPFDLGFVVTRSLNRVLASSPDLNTVLAALNTVFVGMQTTYIVWTWLVEGRARATIAALFMFTCRGILGYSTQLPLPQDFLGSGVDFPVGNVSFFLFFSGHVAGSMIASLDMRRMQRLRLAMVFDILNVLQSIRLLGTRGHYTIDLAVGVGAGILFDSLAGKYEEMMSKRHLGTGFSLISKDSLVN