AT3G15850

Gene Details:

Gene ID: AT3G15850
Gene Symbol: ADS3, AtADS3, FAD5, FADB, JB67
Gene Name: fatty acid desaturase 5, FATTY ACID DESATURASE B
Description: fatty acid desaturase 5;(source:Araport11)
TAIR Accession: locus:2093302
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Transcripts:

AT3G15850.1

Gene Ontology:

GO:0010205 — acts upstream of or within — photoinhibition
GO:0102657 — enables — 1-18:1-2-16:0-monogalactosyldiacylglycerol palmitoyl-lipid 7-desaturase activity
GO:0006636 — acts upstream of or within — unsaturated fatty acid biosynthetic process
GO:0005789 — is active in — endoplasmic reticulum membrane
GO:0009979 — enables — 16:0 monogalactosyldiacylglycerol desaturase activity
GO:0102843 — enables — 1-18:2-2-16:0-monogalactosyldiacylglycerol desaturase activity (SN2-16:1 forming)
GO:0006636 — involved in — unsaturated fatty acid biosynthetic process
GO:0009579 — located in — thylakoid
GO:0031408 — involved in — oxylipin biosynthetic process
GO:0009507 — located in — chloroplast

Germplasm Phenotype:

CS206 — altered fatty acid metabolism, no other phenotypic effect.
CS23879 — Leaves lack any detectable amounts of the unsaturated 16-carbon fatty acids, 16:1 delta 7, 16:2 and 16:3 fatty acid methylesters. The mutant leaves also have increased levels of 16:0 fatty acid methylesters. This phenotype is the fad5-2 mutation based upon similarity to the fad5-1 phenotype in the literature.
fad5-3 — fad5-3 single mutant similar to other fad5 alleles. Altered fatty acid metabolism.
fad5-3/crl — The suppressor of crl 4, spcrl4 (crl/fad5-3) shows pale leaves with improved morphology alongwith abrogation of cell deatrh phenotype of crumpled leaf mutnat (crl). Loss of CRL leads to altered leaf morphology, pale leaves, small stature and localized cell death. The FAD5 deficiency in crl, abrogates the cell death and improves leaf morphology and plant stature but have more paler leaves.

Literature:

Sequence:

cDNA Sequence

>AT3G15850.1 AAATGTAAGGTCTATGGAACATGTCCCTTTCACTCTTGGGATTTTTCCTTTAATGAATAAGAAAGAATGGGCTCAAAACCAAAATAAGCCCATTCAAGAGATCAATGAGCCCAATTGTTTGAAAGCAAATATTGGGGTGATTTGTTAACTTTCCAAGAAAAACACGGGCTTTTCAGCAAAACAACTCGAAAAATTGAAGAGAAGATCCGGGTTTTAGATAACTGCCCCAAATTGGCAATCCAAATCCCTAAAACCATCTTATCCTCTCTTTCCAAATCTAGCCGCAATGTAGTCCCGTGAACCACAAAAAAGATGAGATCTTGCACGTCTCTGTCATCACAACTAGTACTACTAATTGTGAAGCATACAAAAAAGACCGACCCTTATTTATACACGCACACATATTAACATATTTATACTACTAGTATATAAGTTAAGGGTTTAAGCCTCTTCTCTTCCTTCTTTCTCTTAGCCATCACATCGATAATGGCTTCTCTTCTAACAAAACCCAAACCCGTTTTCCTCTGTTCACCATCGTTATCTCCAAGAACTTTGAACACAGCAACACCGTCATTGAATTTCACCAGAATTTCATTCACCCATCACCAAAAGCTTGCTCCTTTCAAGCCTCCTAGTCTCGTTGTTGCATTCTCTGAAAAGGGTTTGAAGAGAGATGTCACCACAGCTGCTGCAGCGACGGAGGGAGATTACAGAAGGATAATGTTATCTGATGTGTTGGTGAAGAAGAAGGAAAAAGTAGTTTGGTGGGAGAGAGAATGGAAAGCTATGGACTTTGGAGCTGTTGCTGTCGTTTTGTCTATGCATTTGCTTAGTCTTTTGGCTCCGTTTCAATTCAATTGGAGAGCTGTTTCGGTTGCTTTTGGGCTTTATATCGTTACAGGTCTTCTGGGGATTACTCTGTCTTTCCATAGGAATCTTTCTCATAAAGCCTTCAAGCTACCTAAATGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAAGCTCTTCAGGGAAACCCAATTGATTGGGTGAGTACACATAGGTACCATCATCAGTTTTGTGATTCAGACAGAGACCCTCATAGCCCACTTGATGGGTTTTGGTTCAGTCACATGAATTGGATGTTTGATACCAATACAATCACCCAAAGGTGTGGAGAGCCTAATAATGTTGGGGACTTGGAGAAGCAGCCATTCTATCGATTCCTTCGAACCACCTACATTTTGCATCCGCTGGCTCTAGCGGTTGCTTTATACGCAATGGGTGGCTTTCCATTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATATCATATAACTTGGCTAGTGAACTCAGCTTGTCATGTATGGGGAAAACAAGCATGGAACACAGGCGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTAGCATTCGGGGAAGGATGGCACAACAATCACCATGCTTTTGAGTTCTCAGCTCGACACGGCTTAGAATGGTGGCAACTTGATATGACTTGGTACGTCGTTAAGTTCCTTCAAGCCATCGGTTTAGCAACTGATGTCAAGCTCCCATCGGAAGCTCAGAAACAAAGAATGGCATTCACCAGCGACTGATCTTAAAAAACTACATGGTTATGCCTAAAGTCAAAACTGTCGGTTCGATTGAAGCTATGAAGGTTTTAAAAAAGGATTTTGTTCTGCTTTTTTGTGTTTACTTAAAGGTATATATCTGTGCAAGAGATTGTATGTGACAAACTGATTATGAATAATATCTATAATTACATTCAATACAAAAGGAAGC

CDS Sequence

>AT3G15850.1 ATGGCTTCTCTTCTAACAAAACCCAAACCCGTTTTCCTCTGTTCACCATCGTTATCTCCAAGAACTTTGAACACAGCAACACCGTCATTGAATTTCACCAGAATTTCATTCACCCATCACCAAAAGCTTGCTCCTTTCAAGCCTCCTAGTCTCGTTGTTGCATTCTCTGAAAAGGGTTTGAAGAGAGATGTCACCACAGCTGCTGCAGCGACGGAGGGAGATTACAGAAGGATAATGTTATCTGATGTGTTGGTGAAGAAGAAGGAAAAAGTAGTTTGGTGGGAGAGAGAATGGAAAGCTATGGACTTTGGAGCTGTTGCTGTCGTTTTGTCTATGCATTTGCTTAGTCTTTTGGCTCCGTTTCAATTCAATTGGAGAGCTGTTTCGGTTGCTTTTGGGCTTTATATCGTTACAGGTCTTCTGGGGATTACTCTGTCTTTCCATAGGAATCTTTCTCATAAAGCCTTCAAGCTACCTAAATGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAAGCTCTTCAGGGAAACCCAATTGATTGGGTGAGTACACATAGGTACCATCATCAGTTTTGTGATTCAGACAGAGACCCTCATAGCCCACTTGATGGGTTTTGGTTCAGTCACATGAATTGGATGTTTGATACCAATACAATCACCCAAAGGTGTGGAGAGCCTAATAATGTTGGGGACTTGGAGAAGCAGCCATTCTATCGATTCCTTCGAACCACCTACATTTTGCATCCGCTGGCTCTAGCGGTTGCTTTATACGCAATGGGTGGCTTTCCATTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATATCATATAACTTGGCTAGTGAACTCAGCTTGTCATGTATGGGGAAAACAAGCATGGAACACAGGCGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTAGCATTCGGGGAAGGATGGCACAACAATCACCATGCTTTTGAGTTCTCAGCTCGACACGGCTTAGAATGGTGGCAACTTGATATGACTTGGTACGTCGTTAAGTTCCTTCAAGCCATCGGTTTAGCAACTGATGTCAAGCTCCCATCGGAAGCTCAGAAACAAAGAATGGCATTCACCAGCGACTGA

Protein Sequence

>AT3G15850.1 MASLLTKPKPVFLCSPSLSPRTLNTATPSLNFTRISFTHHQKLAPFKPPSLVVAFSEKGLKRDVTTAAAATEGDYRRIMLSDVLVKKKEKVVWWEREWKAMDFGAVAVVLSMHLLSLLAPFQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTNTITQRCGEPNNVGDLEKQPFYRFLRTTYILHPLALAVALYAMGGFPFIVWGMGVRIVWVYHITWLVNSACHVWGKQAWNTGDLSKNNWWVAALAFGEGWHNNHHAFEFSARHGLEWWQLDMTWYVVKFLQAIGLATDVKLPSEAQKQRMAFTSD