Gene Details:
- Gene ID: AT3G17100
- Gene Symbol: AIF3
- Gene Name: ATBS1 Interacting Factor 3
- Description: sequence-specific DNA binding transcription factor;(source:Araport11)
- TAIR Accession: locus:2086117
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0046983 — enables — protein dimerization activity
- GO:0005634 — located in — nucleus
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- Toxicity of free proline revealed in an arabidopsis T-DNA-tagged mutant deficient in proline dehydrogenase. DOI: 10.1093/pcp/pcg066 ; PMID: 12773641
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana. DOI: 10.1105/tpc.151140 ; PMID: 14600211
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Regulation of Arabidopsis brassinosteroid signaling by atypical basic helix-loop-helix proteins. DOI: 10.1105/tpc.109.072504 ; PMID: 20023194
- Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. DOI: 10.1016/j.diff.2010.02.003 ; PMID: 20219281
- ATBS1 INTERACTING FACTORs negatively regulate Arabidopsis cell elongation in the triantagonistic bHLH system. DOI: 10.4161/psb.23448 ; PMID: 23333962
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- Modulation of plant development and chilling stress responses by alternative splicing events under control of the spliceosome protein SmEb in Arabidopsis. DOI: 10.1111/pce.14386 ; PMID: 35770732
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequence:
cDNA Sequence
- >AT3G17100.2 AAGGATAACAATAATTAATTCTAACAGGATAGTGCACATCACATGGCAGAAGTAGGACAGTAATTTGTTTTTGGTTACATGTGTATAAAAATGCGATTCTTTGCTTCATTCCTCTTTGTTAAAATAAAATAAAATAAAAATAAAAGGAAGAAGAAGAAGAAGAAAGGATTCGTCTTCCTTCTTCCACACCCTTTCTGACACCTCATCTCCCCTCCCACCTTCTCCGTCCCGTTCCGTTTCTCCATCAGATCCTCGATTCCGATCCAACAGTTCGAATTCAGTTTCCGATTCTGATCTGATCGAACCAATACTCACTGAGATTTGATCGGCGATTATGGAGTCTATATCTCCGGTATCGAATCAGCTTCTTCAGCCGACGACGACGAGCTCTAATTCCGATCGCTCTCGTCGTAAGCGTAAGAAGAAATCATCGCCATCATCGGTTGAGAAATCTCCATCTCCGTCAATATCGTTGGAGAAATGGAGATCGGAGAAGCAGCAACAGATCTACTCAACGAAGCTAGTTCATGCTTTAAGAGAGCTACGAATCAGCCAACAACCATCTTCATCATCATCTTCTTCGATTCCACGTGGAGGTAGAGCCGTACGTGAAGTCGCCGATAGAGCTTTAGCAGTTGCGGCGAGAGGTAAAACGTTATGGAGTCGAGCGATACTTTCAAAAGCTGTAAAACTCAAATTCAGGAAACACAAACGCCAGAGAATCTCTAATCCGACGACGACGACGTTAACCACCGGGAGTATCAGGTCAAAGAAACAGAGAGCGACGGTTTTGAGGCTTAAGGCTAAAGGTTTGCCAGCTGTACAGAGGAAAGTGAAAGTACTGAGCCGGTTAGTTCCCGGTTGCCGTAAACAATCATTACCGGTGGTTTTAGAAGAAACCACTGATTATATAGCTGCGATGGAGATGCAGATTCGTACTATGACTGCGATTCTCTCCGCCGTTAGTTCTTCTCCTCCGCCGCCAACGCCAGGTCACGAAGGGGGACAAACACACATGCTTGGTTAGTTGGCCAAACTGTCCTTTTATTTTTTTCCAATTTTAAAAACCAAAAAAAAAACTGTTTTTTTTTATCATATTATTATTCTTCTCACTGTATTGTTTGTTGTTTGAATATTTTACTATTCAACTTTATTTACCATTTCGTCATGTATATCCTTTTTTCTTGAATCTCTCTATTACCAAAAAAATTAGTGCCAAGAAGAAGAAACAGGACAGTGATTAATTTATGTATAATCGTAATAAATTTCAGTTTCTTGATAATCGTGGAAGCACATTTGAGAGATTGTGATTTAGTTTGTTGTTTTTGCAATACTTGTTGATTAAGATAACAACTGTGGACATAATGACAAATTTGTTTTTAAAGTGTTTGGTGAATTAATGATATGGCAAAATGAAACAATGGAGAGTATAATTAGTTTTTGTTTTGTTATGTTTGAAGTTAGGTTGGTGATTGGAACTGAGTTCTCTAGATCTGTTATGACAACATTTATTTTC
- >AT3G17100.1 AAGGATAACAATAATTAATTCTAACAGGATAGTGCACATCACATGGCAGAAGTAGGACAGTAATTTGTTTTTGGTTACATGTGTATAAAAATGCGATTCTTTGCTTCATTCCTCTTTGTTAAAATAAAATAAAATAAAAATAAAAGGAAGAAGAAGAAGAAGAAAGGATTCGTCTTCCTTCTTCCACACCCTTTCTGACACCTCATCTCCCCTCCCACCTTCTCCGTCCCGTTCCGTTTCTCCATCAGATCCTCGATTCCGATCCAACAGTTCGAATTCAGTTTCCGATTCTGATCTGATCGAACCAATACTCACTGAGATTTGATCGGCGATTATGGAGTCTATATCTCCGGTATCGAATCAGCTTCTTCAGCCGACGACGACGAGCTCTAATTCCGATCGCTCTCGTCGTAAGCGTAAGAAGAAATCATCGCCATCATCGGTTGAGAAATCTCCATCTCCGTCAATATCGTTGGAGAAATGGAGATCGGAGAAGCAGCAACAGATCTACTCAACGAAGCTAGTTCATGCTTTAAGAGAGCTACGAATCAGCCAACAACCATCTTCATCATCATCTTCTTCGATTCCACGTGGAGGTAGAGCCGTACGTGAAGTCGCCGATAGAGCTTTAGCAGTTGCGGCGAGAGGTAAAACGTTATGGAGTCGAGCGATACTTTCAAAAGCTGTAAAACTCAAATTCAGGAAACACAAACGCCAGAGAATCTCTAATCCGACGACGACGACGTTAACCACCGGGAGTATCAGGTCAAAGAAACAGAGAGCGACGGTTTTGAGGCTTAAGGCTAAAGGTTTGCCAGCTGTACAGAGGAAAGTGAAAGTACTGAGCCGGTTAGTTCCCGGTTGCCGTAAACAATCATTACCGGTGGTTTTAGAAGAAACCACTGATTATATAGCTGCGATGGAGATGCAGATTCGTACTATGACTGCGATTCTCTCCGCCGTTAGTTCTTCTCCTCCGCCGCCAACGCCAGGTCACGAAGGGGGACAAACACACATGCTTGGTTAGTTGGCCAAACTGTCCTTTTATTTTTTTCCAATTTTAAAAACCAAAAAAAAAACTGTTTTTTTTTATCATATTATTATTCTTCTCACTGTATTGTTTGTTGTTTGAATATTTTACTATTCAACTTTATTTACCATTTCGTCATGTATATCCTTTTTTCTTGAATCTCTCTATTACCAAAAAAATTAGTGCCAAGAAGAAGAAACAGGACAGTGATTAATTTATGTATAATCGTAATAAATTTCAGTTTCTTGATAATCGTGGAAGCACATTTGAGAGATTGTGATTTAGTTTGTTGTTTTTGCAATACTTGTTGATTAAGATAACAACTGTGGACATAATGACAAATTTGTTTTTAAAGTGTTTGGTGAATTAATGATATGGCAAAATGAAACAATGGAGAGTATAATTAGTTTTTGTTTTGTTATGTTTGAAGTTAGGTTGGTGATTGGAACTGAGTTCTCTAGATCTGTTATGACAACATTTATTTTC
CDS Sequence
- >AT3G17100.2 ATGGAGTCTATATCTCCGGTATCGAATCAGCTTCTTCAGCCGACGACGACGAGCTCTAATTCCGATCGCTCTCGTCGTAAGCGTAAGAAGAAATCATCGCCATCATCGGTTGAGAAATCTCCATCTCCGTCAATATCGTTGGAGAAATGGAGATCGGAGAAGCAGCAACAGATCTACTCAACGAAGCTAGTTCATGCTTTAAGAGAGCTACGAATCAGCCAACAACCATCTTCATCATCATCTTCTTCGATTCCACGTGGAGGTAGAGCCGTACGTGAAGTCGCCGATAGAGCTTTAGCAGTTGCGGCGAGAGGTAAAACGTTATGGAGTCGAGCGATACTTTCAAAAGCTGTAAAACTCAAATTCAGGAAACACAAACGCCAGAGAATCTCTAATCCGACGACGACGACGTTAACCACCGGGAGTATCAGGTCAAAGAAACAGAGAGCGACGGTTTTGAGGCTTAAGGCTAAAGGTTTGCCAGCTGTACAGAGGAAAGTGAAAGTACTGAGCCGGTTAGTTCCCGGTTGCCGTAAACAATCATTACCGGTGGTTTTAGAAGAAACCACTGATTATATAGCTGCGATGGAGATGCAGATTCGTACTATGACTGCGATTCTCTCCGCCGTTAGTTCTTCTCCTCCGCCGCCAACGCCAGGTCACGAAGGGGGACAAACACACATGCTTGGTTAG
- >AT3G17100.1 ATGGAGTCTATATCTCCGGTATCGAATCAGCTTCTTCAGCCGACGACGACGAGCTCTAATTCCGATCGCTCTCGTCGTAAGCGTAAGAAGAAATCATCGCCATCATCGGTTGAGAAATCTCCATCTCCGTCAATATCGTTGGAGAAATGGAGATCGGAGAAGCAGCAACAGATCTACTCAACGAAGCTAGTTCATGCTTTAAGAGAGCTACGAATCAGCCAACAACCATCTTCATCATCATCTTCTTCGATTCCACGTGGAGGTAGAGCCGTACGTGAAGTCGCCGATAGAGCTTTAGCAGTTGCGGCGAGAGGTAAAACGTTATGGAGTCGAGCGATACTTTCAAAAGCTGTAAAACTCAAATTCAGGAAACACAAACGCCAGAGAATCTCTAATCCGACGACGACGACGTTAACCACCGGGAGTATCAGGTCAAAGAAACAGAGAGCGACGGTTTTGAGGCTTAAGGCTAAAGGTTTGCCAGCTGTACAGAGGAAAGTGAAAGTACTGAGCCGGTTAGTTCCCGGTTGCCGTAAACAATCATTACCGGTGGTTTTAGAAGAAACCACTGATTATATAGCTGCGATGGAGATGCAGATTCGTACTATGACTGCGATTCTCTCCGCCGTTAGTTCTTCTCCTCCGCCGCCAACGCCAGGTCACGAAGGGGGACAAACACACATGCTTGGTTAG
Protein Sequence
- >AT3G17100.2 MESISPVSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSSPPPPTPGHEGGQTHMLG
- >AT3G17100.1 MESISPVSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSSPPPPTPGHEGGQTHMLG