Gene Details:
- Gene ID: AT3G20920
- Gene Symbol: AtSEC62
- Gene Name:
- Description: translocation protein-like protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. DOI: 10.1006/jmbi.2000.4315 ; PMID: 11152613
- Identification of a vacuolar sucrose transporter in barley and Arabidopsis mesophyll cells by a tonoplast proteomic approach. DOI: 10.1104/pp.106.079533 ; PMID: 16581873
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The ER luminal C-terminus of AtSec62 is critical for male fertility and plant growth in Arabidopsis thaliana. DOI: 10.1111/tpj.14483 ; PMID: 31355985
- AtSec62 is critical for plant development and is involved in ER-phagy in Arabidopsis thaliana. DOI: 10.1111/jipb.12872 ; PMID: 31483571
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequence:
cDNA Sequence
- >AT3G20920.1 AAAAGAAAAATCGAAAAAAAAAAACTCTCCGACTCGGAAGAAGAGGGAGAGAGATGAAGAAGCCGGTCGGAGCCGAGAAGAAGAGGGTTAAACGATCATCGGGATCTGCATCTACTTCCGTTAGAGATTCTGGTTCTGATTCTCAACCTAGGAAGCAAGCTGTGAAGAAGGATAGTTTTCAGTTGTTTGCTGAGAAAGTTAGAGACCACAAGGGATTAGAATCCAGATGGGCTGTTATGGAGCAAGCACGAGTTGAATACTTTAGAGGGAAAGATTTTGTGAGCTTTATGAAGAATAACCCTGACTTTAAAGATATTCTGGAAGAAGATAAAGACCTTGACACAGACGATATTGCCAATGTTTTGTTGGGAAAGAACCTTTTGGTCCGCTGTGATCGTGTTACTAAAACTCTTCGTCCCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGTGACGATCAATCTTTCTCTGAAAATGATGCCTTTTTTGCATGGACGTTCGAAAAACGGCATCCGCTATGGCAAACGCTTTTGTCCTTCTTCTGGCCTGTATTGACTCTTGCAATTTGTTTGTTTCCTGTGTATCCACACCGTTGCAAACTAATTGTACTCTACTCATGTGCGGGCATTCTTCTGATGATTCTCTCCTTACTTTTCGTGAGAGCAGTTGCTTTCGGTGCTATGTGGATTCTTTTGGGAAAGCGTGTCTGGTTCTTCCCCAACATTCTAGCTGAGGAAGCCACATTGAAGGAACTGTTCCGTTTCTGGCCAAAGAAAGACGAGGAAGAACCGCCCAAGTGGACATCTCGACTTTTCTACACAGTAGTGGCTATTGTTGTTGTCATGCTGCTTAGGCGTCATGCCCCTGATGAAGCTGCTCGGGCCAGGTACCAAAGAAGGATGTCCAACATCATTGATGATGTCCTTGAGTGGTCACCAAAGCTAGCACTTTCTGGTTTGATGGAGAATCAGCAACCTGTAAACATCACAGATGCGGCAAACAACTCCTCAGATTCAGCAGGAGGTCCCGACCAGACTGAAGAGGTCGACCTAGATGAAACTCAAGGCGAGGACCTAGACGAAACGCAAGGCAAGGAGGAAGCTGAAGGTTGGACTGACTCTGATCTTAAAACATAAAAAAACCAAAATATAGAAACGAAAGTTCATTGTAACAATAAGTCAACTTAAGTGACCAAGACGAGGTGAGTTCTTTATAAGAAAGTCTTGAAAGATTTTGTGGTACTCCATTACTCCTTTACATTTTGACACAATCTGGAATTTAGCTCTCAATCACAGTTTTGTATTCCAAACTTCAATTCCAGCT
- >AT3G20920.2 AAAAGAAAAATCGAAAAAAAAAAACTCTCCGACTCGGAAGAAGAGGGAGAGAGATGAAGAAGCCGGTCGGAGCCGAGAAGAAGAGGGTTAAACGATCATCGGGATCTGCATCTACTTCCGTTAGAGATTCTGGTTCTGATTCTCAACCTAGGAAGCAAGCTGTGAAGAAGGATAGTTTTCAGTTGTTTGCTGAGAAAGTTAGAGACCACAAGGGATTAGAATCCAGATGGGCTGTTATGGAGCAAGCACGAGTTGAATACTTTAGAGGGAAAGATTTTGTGAGCTTTATGAAGAATAACCCTGACTTTAAAGATATTCTGGAAGAAGATAAAGACCTTGACACAGACGATATTGCCAATGTTTTGTTGGGAAAGAACCTTTTGGTCCGCTGTGATCGTGTTACTAAAACTCTTCGTCCCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGTGACGATCAATCTTTCTCTGAAAATGATGCCTTTTTTGCATGGACGTTCGAAAAACGGCATCCGCTATGGCAAACGCTTTTGTCCTTCTTCTGGCCTGTATTGACTCTTGCAATTTGTTTGTTTCCTGTGTATCCACACCGTTGCAAACTAATTGTACTCTACTCATGTGCGGGCATTCTTCTGATGATTCTCTCCTTACTTTTCGTGAGAGCAGTTGCTTTCGGTGCTATGTGGATTCTTTTGGGAAAGCGTGTCTGGTTCTTCCCCAACATTCTAGCTGAGGAAGCCACATTGAAGGAACTGTTCCGTTTCTGGCCAAAGAAAGACGAGGAAGAACCGCCCAAGTGGACATCTCGACTTTTCTACACAGTAGTGGCTATTGTTGTTGTCATGCTGCTTAGGCGTCATGCCCCTGATGAAGCTGCTCGGGCCAGGTACCAAAGAAGGATGTCCAACATCATTGATGATGTCCTTGAGTGGTCACCAAAGCTAGCACTTTCTGGTTTGATGGAGAATCAGCAACCTGTAAACATCACAGATGCGGCAAACAACTCCTCAGATTCAGCAGGAGGTCCCGACCAGACTGAAGAGGTCGACCTAGATGAAACTCAAGGCGAGGACCTAGACGAAACGCAAGGCAAGGAGGAAGCTGAAGGTTGGACTGACTCTGATCTTAAAACATAAAAAAACCAAAATATAGAAACGAAAGTTCATTGTAACAATAAGTCAACTTAAGTGACCAAGACGAGGTGAGTTCTTTATAAGAAAGTCTTGAAAGATTTTGTGGTACTCCATTACTCCTTTACATTTTGACACAATCTGGAATTTAGCTCTCAATCACAGTTTTGTATTCCAAACTTCAATTCCAGCT
CDS Sequence
- >AT3G20920.1 ATGAAGAAGCCGGTCGGAGCCGAGAAGAAGAGGGTTAAACGATCATCGGGATCTGCATCTACTTCCGTTAGAGATTCTGGTTCTGATTCTCAACCTAGGAAGCAAGCTGTGAAGAAGGATAGTTTTCAGTTGTTTGCTGAGAAAGTTAGAGACCACAAGGGATTAGAATCCAGATGGGCTGTTATGGAGCAAGCACGAGTTGAATACTTTAGAGGGAAAGATTTTGTGAGCTTTATGAAGAATAACCCTGACTTTAAAGATATTCTGGAAGAAGATAAAGACCTTGACACAGACGATATTGCCAATGTTTTGTTGGGAAAGAACCTTTTGGTCCGCTGTGATCGTGTTACTAAAACTCTTCGTCCCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGTGACGATCAATCTTTCTCTGAAAATGATGCCTTTTTTGCATGGACGTTCGAAAAACGGCATCCGCTATGGCAAACGCTTTTGTCCTTCTTCTGGCCTGTATTGACTCTTGCAATTTGTTTGTTTCCTGTGTATCCACACCGTTGCAAACTAATTGTACTCTACTCATGTGCGGGCATTCTTCTGATGATTCTCTCCTTACTTTTCGTGAGAGCAGTTGCTTTCGGTGCTATGTGGATTCTTTTGGGAAAGCGTGTCTGGTTCTTCCCCAACATTCTAGCTGAGGAAGCCACATTGAAGGAACTGTTCCGTTTCTGGCCAAAGAAAGACGAGGAAGAACCGCCCAAGTGGACATCTCGACTTTTCTACACAGTAGTGGCTATTGTTGTTGTCATGCTGCTTAGGCGTCATGCCCCTGATGAAGCTGCTCGGGCCAGGTACCAAAGAAGGATGTCCAACATCATTGATGATGTCCTTGAGTGGTCACCAAAGCTAGCACTTTCTGGTTTGATGGAGAATCAGCAACCTGTAAACATCACAGATGCGGCAAACAACTCCTCAGATTCAGCAGGAGGTCCCGACCAGACTGAAGAGGTCGACCTAGATGAAACTCAAGGCGAGGACCTAGACGAAACGCAAGGCAAGGAGGAAGCTGAAGGTTGGACTGACTCTGATCTTAAAACATAA
- >AT3G20920.2 ATGAAGAAGCCGGTCGGAGCCGAGAAGAAGAGGGTTAAACGATCATCGGGATCTGCATCTACTTCCGTTAGAGATTCTGGTTCTGATTCTCAACCTAGGAAGCAAGCTGTGAAGAAGGATAGTTTTCAGTTGTTTGCTGAGAAAGTTAGAGACCACAAGGGATTAGAATCCAGATGGGCTGTTATGGAGCAAGCACGAGTTGAATACTTTAGAGGGAAAGATTTTGTGAGCTTTATGAAGAATAACCCTGACTTTAAAGATATTCTGGAAGAAGATAAAGACCTTGACACAGACGATATTGCCAATGTTTTGTTGGGAAAGAACCTTTTGGTCCGCTGTGATCGTGTTACTAAAACTCTTCGTCCCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGTGACGATCAATCTTTCTCTGAAAATGATGCCTTTTTTGCATGGACGTTCGAAAAACGGCATCCGCTATGGCAAACGCTTTTGTCCTTCTTCTGGCCTGTATTGACTCTTGCAATTTGTTTGTTTCCTGTGTATCCACACCGTTGCAAACTAATTGTACTCTACTCATGTGCGGGCATTCTTCTGATGATTCTCTCCTTACTTTTCGTGAGAGCAGTTGCTTTCGGTGCTATGTGGATTCTTTTGGGAAAGCGTGTCTGGTTCTTCCCCAACATTCTAGCTGAGGAAGCCACATTGAAGGAACTGTTCCGTTTCTGGCCAAAGAAAGACGAGGAAGAACCGCCCAAGTGGACATCTCGACTTTTCTACACAGTAGTGGCTATTGTTGTTGTCATGCTGCTTAGGCGTCATGCCCCTGATGAAGCTGCTCGGGCCAGGTACCAAAGAAGGATGTCCAACATCATTGATGATGTCCTTGAGTGGTCACCAAAGCTAGCACTTTCTGGTTTGATGGAGAATCAGCAACCTGTAAACATCACAGATGCGGCAAACAACTCCTCAGATTCAGCAGGAGGTCCCGACCAGACTGAAGAGGTCGACCTAGATGAAACTCAAGGCGAGGACCTAGACGAAACGCAAGGCAAGGAGGAAGCTGAAGGTTGGACTGACTCTGATCTTAAAACATAA
Protein Sequence
- >AT3G20920.1 MKKPVGAEKKRVKRSSGSASTSVRDSGSDSQPRKQAVKKDSFQLFAEKVRDHKGLESRWAVMEQARVEYFRGKDFVSFMKNNPDFKDILEEDKDLDTDDIANVLLGKNLLVRCDRVTKTLRPGKKKLSTWPAHLEIFRDDQSFSENDAFFAWTFEKRHPLWQTLLSFFWPVLTLAICLFPVYPHRCKLIVLYSCAGILLMILSLLFVRAVAFGAMWILLGKRVWFFPNILAEEATLKELFRFWPKKDEEEPPKWTSRLFYTVVAIVVVMLLRRHAPDEAARARYQRRMSNIIDDVLEWSPKLALSGLMENQQPVNITDAANNSSDSAGGPDQTEEVDLDETQGEDLDETQGKEEAEGWTDSDLKT
- >AT3G20920.2 MKKPVGAEKKRVKRSSGSASTSVRDSGSDSQPRKQAVKKDSFQLFAEKVRDHKGLESRWAVMEQARVEYFRGKDFVSFMKNNPDFKDILEEDKDLDTDDIANVLLGKNLLVRCDRVTKTLRPGKKKLSTWPAHLEIFRDDQSFSENDAFFAWTFEKRHPLWQTLLSFFWPVLTLAICLFPVYPHRCKLIVLYSCAGILLMILSLLFVRAVAFGAMWILLGKRVWFFPNILAEEATLKELFRFWPKKDEEEPPKWTSRLFYTVVAIVVVMLLRRHAPDEAARARYQRRMSNIIDDVLEWSPKLALSGLMENQQPVNITDAANNSSDSAGGPDQTEEVDLDETQGEDLDETQGKEEAEGWTDSDLKT