Gene Details:
- Gene ID: AT3G21840
- Gene Symbol: ASK7, SK7
- Gene Name: SKP1-like 7, SKP1-like 7
- Description: SKP1-like 7;(source:Araport11)
- TAIR Accession: locus:2093074
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005634 — is active in — nucleus
- GO:0005634 — located in — nucleus
- GO:0005737 — is active in — cytoplasm
- GO:0006511 — acts upstream of or within — ubiquitin-dependent protein catabolic process
- GO:0031146 — involved in — SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
- GO:0097602 — enables — cullin family protein binding
- GO:0019005 — part of — SCF ubiquitin ligase complex
Function-related keywords:
Literature:
- SKP1-SnRK protein kinase interactions mediate proteasomal binding of a plant SCF ubiquitin ligase. DOI: 10.1093/emboj/20.11.2742 ; PMID: 11387208
- Protein interaction analysis of SCF ubiquitin E3 ligase subunits from Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01768.x ; PMID: 12795696
- The Arabidopsis SKP1-like genes present a spectrum of expression profiles. DOI: 10.1023/a:1025056008926 ; PMID: 13677462
- Members of the Arabidopsis-SKP1-like gene family exhibit a variety of expression patterns and may play diverse roles in Arabidopsis. DOI: 10.1104/pp.103.024703 ; PMID: 12970487
- Expression and interaction analysis of Arabidopsis Skp1-related genes. DOI: 10.1093/pcp/pch009 ; PMID: 14749489
- Molecular evolution and selection patterns of plant F-box proteins with C-terminal kelch repeats. DOI: 10.1104/pp.110.166579 ; PMID: 21119043
- A comprehensive analysis of interaction and localization of Arabidopsis SKP1-like (ASK) and F-box (FBX) proteins. DOI: 10.1371/journal.pone.0050009 ; PMID: 23166809
- The SKP1-like gene family of Arabidopsis exhibits a high degree of differential gene expression and gene product interaction during development. DOI: 10.1371/journal.pone.0050984 ; PMID: 23226441
Sequence:
cDNA Sequence
- >AT3G21840.1 TCAATTTTTCAATCTTTCATCAAAATTTCTTCCAGAGAAAAAAAAATCTCCCCCACAAAGAAAACAACAATGTCGACAAAAAAGATCATGTTGAAGAGCTCAGATGGTAAAATGTTTGAGATTGAAGAAGAGACCGCACGCCAATGCCAGACCATAGCTCATATGATTGAAGCCGAATGTACGGATAACGTAATCCCGGTTTCAAACGTGACAAGCGAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGATGAGGATCTCAAGAAGTGGGACAAGGAGTTCATGGAAAAAGATCAATACACGATCTTTCATCTCATGAATGCTGCGTATGACCTACACATCAAAAGCCTTCTTGCTCTAGCTTACCAAACAGTCGCGGATATGGTCAACGACAATAAATGGGCTTTTGAATGAGCGGATTATCAAAACCTAAGAAGCTTTTCTTGCTTTTCTTTTCTCTCTTTTAGTGTGTGTTATTCAGTTTCGTTATCAATGTAGATGATGGTGACTTCGTCTACGTTCGACAATCTAATAATGAAAGAAGCTTTCTTTCTGTTCTTTTTTCTTTTTCTTTCTTCGTTAGTGTGTGTTTTTCAATTTCTTGATCAATGTAGTTGATGATGACTTCATCAAAGTTCAATAATCAAATAATGAAAGTAGACATATATTTCGTTTA
CDS Sequence
- >AT3G21840.1 ATGTCGACAAAAAAGATCATGTTGAAGAGCTCAGATGGTAAAATGTTTGAGATTGAAGAAGAGACCGCACGCCAATGCCAGACCATAGCTCATATGATTGAAGCCGAATGTACGGATAACGTAATCCCGGTTTCAAACGTGACAAGCGAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGATGAGGATCTCAAGAAGTGGGACAAGGAGTTCATGGAAAAAGATCAATACACGATCTTTCATCTCATGAATGCTGCGTATGACCTACACATCAAAAGCCTTCTTGCTCTAGCTTACCAAACAGTCGCGGATATGGTCAACGACAATAAATGGGCTTTTGAATGA
Protein Sequence
- >AT3G21840.1 MSTKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKHHVDAANPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMVNDNKWAFE