Gene Details:
- Gene ID: AT3G25430
- Gene Symbol: RRD1
- Gene Name:
- Description: Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Literature:
- Isolation and initial characterization of temperature-sensitive mutants of Arabidopsis thaliana that are impaired in root redifferentiation. DOI: 10.1093/pcp/pcg077 ; PMID: 12826624
- Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome. DOI: 10.1105/tpc.010009 ; PMID: 12837951
- mRNA deadenylation by PARN is essential for embryogenesis in higher plants. DOI: 10.1261/rna.7540204 ; PMID: 15247430
- AGRONOMICS1: a new resource for Arabidopsis transcriptome profiling. DOI: 10.1104/pp.109.150185 ; PMID: 20032078
- Tissue organization of fasciated lateral roots of Arabidopsis mutants suggestive of the robust nature of outer layer patterning. DOI: 10.1007/s10265-011-0471-5 ; PMID: 22258701
- Temperature-dependent fasciation mutants provide a link between mitochondrial RNA processing and lateral root morphogenesis. DOI: 10.7554/eLife.61611 ; PMID: 33443014
- Isolation and initial characterization of temperature-sensitive mutants of Arabidopsis thaliana that are impaired in root redifferentiation. DOI: 10.1093/pcp/pcg077 ; PMID: 12826624
Sequence:
cDNA Sequence
- >AT3G25430.2 CGGTGTAGCTGCTCAAAAATGCAAAGGCGCTTCCTTTCGTCAATCTCCGCCACCGCCGGCAATACTAAAACCCTAAATCAAGGAAGATGGAGTGTAAAGCAAGTGAAAAAATCCAACTTTCATGTAACTCTCGACGAGATTCGTACTTCCATCGATTCATCAGACTTCATAGCTCTCTCATTACAAAACACTGGCTCATACGCCGCCGCGTGGCACCGTGTCTCCGCCATTGACACGCCGCAAACTAGCTACTTAAAAGCTAAATACGCAGCCGAACGTTACCAGATTCTCCAGTTCGCTCTCTGCCCTTTCTCTCTTCAAGGCTCTAAACTCACTGTTCATCCATATAACTTTCATTTGTTTCCTCGTGATGAATTGAAGTGTGGTATGCCTTCTTATAGCTTCTCTTGTCAAGCTTCACGTTTAACAGCTATGGCTAGAGAAGGATTTGATTTCAACATTTGCATCTATGAAGGAATCTCATACTTATCTAGAGCACAAGAGTCTGCATCGAAGTTTCTTTCCGAGAATCCGATATTAGCTGATTCTGTTACTGTATCTTCTTCTCCAGCTACTGTAGCTGATACTGTCTTTGTTGGAAGGATTAGGTCACGTGTCAAGAATTGGAGACAGTCTTGTATAGACTCGGGTTCAAAGACAGGAGATGATGATTTGGTGAGCTCTTTGAGAAGGCTGGTGTTGGGGAGTGAGCAGTATGGTTCAAGGCTGTGTTTGACTATTGATGTTTGCAGTGAGCGTCAAGTGCAACTTATCCTAGAGAGCAGAGGAACACAAGCTGTTCGTACTGTCTTTATGAGTTCGAAGGAGGACAAGGATCTTTTTAAGAGAGAGCTTAAAGATCTTGAAAAGGAAGAAAACAGGCGAGTTCGTGGCTTTCGGGAAGTGGTCGATTTTATTTCTTCTTCACAGAAACCTGTCGTTTCCCAGAATTATCTTAGCGATTTTACTTCCATTCATGCTAAATTCCTTGGTCCTCTACCTTCAAATGTGGATGACTTCAGCAGTTCACTGAGCTCAGCATTTCCCAATGTTGTGGATCTCAGTCAGTTCATGAAAGAAATTAGTCCCTTAAGTAATATAAGTAATCTACCTGCAGCTATGTCCTCCTTGAATAGGTTCTTTGCACCTGTGGATGTAGAAGTAGCAAATCAAGGTTGTCCGGTCAAATTAGACGAAGGCCATCAGAGTCACGGGCAGAATGCTGTGATGATATCTCAGCTCTTTGCAAAACTGTGTACCATACAGAAATCAGATCTATCAACTATCCAATCAAATGAAGATTTCCAAGCTTTGGCTTCTGATGAACATGCAAATTCTGTCACCTCTTGCTCTAAAAACGCAGGTGATGAAAATGTTAAAGTCTGGTCAAAGAACAGCCGGAGAGTAAGCTCTGAGAACTTGGTGTTCATATGGGGGTTAGGGAAAAAGATGACAGCTGCAAAGCTGAAGAATGTCCTACAAAAGTCACACCCCGTCTTCGCGAGAGAGTTTGATGTTAAGTACATAGACCGGAGCTCTGCTATTTTGGTGTTTTGGGAGTCAGGTCCTTCAGAGACTTTCCTCAGTGCGGTCAACAATGAAGAGCAACTTGATGGTTCATTAAGAGAGATGGTTGCAGAAGGGCTAAGAGGGGCAGGTTACGAGACTTACAAGAGAGCTTGTAGATTAGGCTTCTGGGAGGCTGACTTGGCGGAATCTTTAGACAAAGCATTGGAATCTTCAGATACCGACCCTGATTCGGACACTAAACCATCAGAGATTGATTGGTCAAACGAATTAGCTATTAATTTTGATGAGCTATGAATAGTTCTGGTTCACTTACAGAACCAATGTATACCGAAATTGAGAACGTTGATTCATTTTTGTTCTTCCA
- >AT3G25430.1 CGGTGTAGCTGCTCAAAAATGCAAAGGCGCTTCCTTTCGTCAATCTCCGCCACCGCCGGCAATACTAAAACCCTAAATCAAGGAAGATGGAGTGTAAAGCAAGTGAAAAAATCCAACTTTCATGTAACTCTCGACGAGATTCGTACTTCCATCGATTCATCAGACTTCATAGCTCTCTCATTACAAAACACTGGCTCATACGCCGCCGCGTGGCACCGTGTCTCCGCCATTGACACGCCGCAAACTAGCTACTTAAAAGCTAAATACGCAGCCGAACGTTACCAGATTCTCCAGTTCGCTCTCTGCCCTTTCTCTCTTCAAGGCTCTAAACTCACTGTTCATCCATATAACTTTCATTTGTTTCCTCGTGATGAATTGAAGTGTGGTATGCCTTCTTATAGCTTCTCTTGTCAAGCTTCACGTTTAACAGCTATGGCTAGAGAAGGATTTGATTTCAACATTTGCATCTATGAAGGAATCTCATACTTATCTAGAGCACAAGAGTCTGCATCGAAGTTTCTTTCCGAGAATCCGATATTAGCTGATTCTGTTACTGTATCTTCTTCTCCAGCTACTGTAGCTGATACTGTCTTTGTTGGAAGGATTAGGTCACGTGTCAAGAATTGGAGACAGTCTTGTATAGACTCGGGTTCAAAGACAGGAGATGATGATTTGGTGAGCTCTTTGAGAAGGCTGGTGTTGGGGAGTGAGCAGTATGGTTCAAGGCTGTGTTTGACTATTGATGTTTGCAGTGAGCGTCAAGTGCAACTTATCCTAGAGAGCAGAGGAACACAAGCTGTTCGTACTGTCTTTATGAGTTCGAAGGAGGACAAGGATCTTTTTAAGAGAGAGCTTAAAGATCTTGAAAAGGAAGAAAACAGGCGAGTTCGTGGCTTTCGGGAAGTGGTCGATTTTATTTCTTCTTCACAGAAACCTGTCGTTTCCCAGAATTATCTTAGCGATTTTACTTCCATTCATGCTAAATTCCTTGGTCCTCTACCTTCAAATGTGGATGACTTCAGCAGTTCACTGAGCTCAGCATTTCCCAATGTTGTGGATCTCAGTCAGTTCATGAAAGAAATTAGTCCCTTAAGTAATATAAGTAATCTACCTGCAGCTATGTCCTCCTTGAATAGGTTCTTTGCACCTGTGGATGTAGAAGTAGCAAATCAAGGTTGTCCGGTCAAATTAGACGAAGGCCATCAGAGTCACGGGCAGAATGCTGTGATGATATCTCAGCTCTTTGCAAAACTGTGTACCATACAGAAATCAGATCTATCAACTATCCAATCAAATGAAGATTTCCAAGCTTTGGCTTCTGATGAACATGCAAATTCTGTCACCTCTTGCTCTAAAAACGCAGGTGATGAAAATGTTAAAGTCTGGTCAAAGAACAGCCGGAGAGTAAGCTCTGAGAACTTGGTGTTCATATGGGGGTTAGGGAAAAAGATGACAGCTGCAAAGCTGAAGAATGTCCTACAAAAGTCACACCCCGTCTTCGCGAGAGAGTTTGATGTTAAGTACATAGACCGGAGCTCTGCTATTTTGGTGTTTTGGGAGTCAGGTCCTTCAGAGACTTTCCTCAGTGCGGTCAACAATGAAGAGCAACTTGATGGTTCATTAAGAGAGATGGTTGCAGAAGGGCTAAGAGGGGCAGGTTACGAGACTTACAAGAGAGCTTGTAGATTAGGCTTCTGGGAGGCTGACTTGGCGGAATCTTTAGACAAAGCATTGGAATCTTCAGATACCGACCCTGATTCGGACACTAAACCATCAGAGATTGATTGGTCAAACGAATTAGCTATTAATTTTGATGAGCTATGAATAGTTCTGGTTCACTTACAGAACCAATGTATACCGAAATTGAGAACGTTGATTCATTTTTGTTCTTCCA
CDS Sequence
- >AT3G25430.2 ATGCAAAGGCGCTTCCTTTCGTCAATCTCCGCCACCGCCGGCAATACTAAAACCCTAAATCAAGGAAGATGGAGTGTAAAGCAAGTGAAAAAATCCAACTTTCATGTAACTCTCGACGAGATTCGTACTTCCATCGATTCATCAGACTTCATAGCTCTCTCATTACAAAACACTGGCTCATACGCCGCCGCGTGGCACCGTGTCTCCGCCATTGACACGCCGCAAACTAGCTACTTAAAAGCTAAATACGCAGCCGAACGTTACCAGATTCTCCAGTTCGCTCTCTGCCCTTTCTCTCTTCAAGGCTCTAAACTCACTGTTCATCCATATAACTTTCATTTGTTTCCTCGTGATGAATTGAAGTGTGGTATGCCTTCTTATAGCTTCTCTTGTCAAGCTTCACGTTTAACAGCTATGGCTAGAGAAGGATTTGATTTCAACATTTGCATCTATGAAGGAATCTCATACTTATCTAGAGCACAAGAGTCTGCATCGAAGTTTCTTTCCGAGAATCCGATATTAGCTGATTCTGTTACTGTATCTTCTTCTCCAGCTACTGTAGCTGATACTGTCTTTGTTGGAAGGATTAGGTCACGTGTCAAGAATTGGAGACAGTCTTGTATAGACTCGGGTTCAAAGACAGGAGATGATGATTTGGTGAGCTCTTTGAGAAGGCTGGTGTTGGGGAGTGAGCAGTATGGTTCAAGGCTGTGTTTGACTATTGATGTTTGCAGTGAGCGTCAAGTGCAACTTATCCTAGAGAGCAGAGGAACACAAGCTGTTCGTACTGTCTTTATGAGTTCGAAGGAGGACAAGGATCTTTTTAAGAGAGAGCTTAAAGATCTTGAAAAGGAAGAAAACAGGCGAGTTCGTGGCTTTCGGGAAGTGGTCGATTTTATTTCTTCTTCACAGAAACCTGTCGTTTCCCAGAATTATCTTAGCGATTTTACTTCCATTCATGCTAAATTCCTTGGTCCTCTACCTTCAAATGTGGATGACTTCAGCAGTTCACTGAGCTCAGCATTTCCCAATGTTGTGGATCTCAGTCAGTTCATGAAAGAAATTAGTCCCTTAAGTAATATAAGTAATCTACCTGCAGCTATGTCCTCCTTGAATAGGTTCTTTGCACCTGTGGATGTAGAAGTAGCAAATCAAGGTTGTCCGGTCAAATTAGACGAAGGCCATCAGAGTCACGGGCAGAATGCTGTGATGATATCTCAGCTCTTTGCAAAACTGTGTACCATACAGAAATCAGATCTATCAACTATCCAATCAAATGAAGATTTCCAAGCTTTGGCTTCTGATGAACATGCAAATTCTGTCACCTCTTGCTCTAAAAACGCAGGTGATGAAAATGTTAAAGTCTGGTCAAAGAACAGCCGGAGAGTAAGCTCTGAGAACTTGGTGTTCATATGGGGGTTAGGGAAAAAGATGACAGCTGCAAAGCTGAAGAATGTCCTACAAAAGTCACACCCCGTCTTCGCGAGAGAGTTTGATGTTAAGTACATAGACCGGAGCTCTGCTATTTTGGTGTTTTGGGAGTCAGGTCCTTCAGAGACTTTCCTCAGTGCGGTCAACAATGAAGAGCAACTTGATGGTTCATTAAGAGAGATGGTTGCAGAAGGGCTAAGAGGGGCAGGTTACGAGACTTACAAGAGAGCTTGTAGATTAGGCTTCTGGGAGGCTGACTTGGCGGAATCTTTAGACAAAGCATTGGAATCTTCAGATACCGACCCTGATTCGGACACTAAACCATCAGAGATTGATTGGTCAAACGAATTAGCTATTAATTTTGATGAGCTATGA
- >AT3G25430.1 ATGCAAAGGCGCTTCCTTTCGTCAATCTCCGCCACCGCCGGCAATACTAAAACCCTAAATCAAGGAAGATGGAGTGTAAAGCAAGTGAAAAAATCCAACTTTCATGTAACTCTCGACGAGATTCGTACTTCCATCGATTCATCAGACTTCATAGCTCTCTCATTACAAAACACTGGCTCATACGCCGCCGCGTGGCACCGTGTCTCCGCCATTGACACGCCGCAAACTAGCTACTTAAAAGCTAAATACGCAGCCGAACGTTACCAGATTCTCCAGTTCGCTCTCTGCCCTTTCTCTCTTCAAGGCTCTAAACTCACTGTTCATCCATATAACTTTCATTTGTTTCCTCGTGATGAATTGAAGTGTGGTATGCCTTCTTATAGCTTCTCTTGTCAAGCTTCACGTTTAACAGCTATGGCTAGAGAAGGATTTGATTTCAACATTTGCATCTATGAAGGAATCTCATACTTATCTAGAGCACAAGAGTCTGCATCGAAGTTTCTTTCCGAGAATCCGATATTAGCTGATTCTGTTACTGTATCTTCTTCTCCAGCTACTGTAGCTGATACTGTCTTTGTTGGAAGGATTAGGTCACGTGTCAAGAATTGGAGACAGTCTTGTATAGACTCGGGTTCAAAGACAGGAGATGATGATTTGGTGAGCTCTTTGAGAAGGCTGGTGTTGGGGAGTGAGCAGTATGGTTCAAGGCTGTGTTTGACTATTGATGTTTGCAGTGAGCGTCAAGTGCAACTTATCCTAGAGAGCAGAGGAACACAAGCTGTTCGTACTGTCTTTATGAGTTCGAAGGAGGACAAGGATCTTTTTAAGAGAGAGCTTAAAGATCTTGAAAAGGAAGAAAACAGGCGAGTTCGTGGCTTTCGGGAAGTGGTCGATTTTATTTCTTCTTCACAGAAACCTGTCGTTTCCCAGAATTATCTTAGCGATTTTACTTCCATTCATGCTAAATTCCTTGGTCCTCTACCTTCAAATGTGGATGACTTCAGCAGTTCACTGAGCTCAGCATTTCCCAATGTTGTGGATCTCAGTCAGTTCATGAAAGAAATTAGTCCCTTAAGTAATATAAGTAATCTACCTGCAGCTATGTCCTCCTTGAATAGGTTCTTTGCACCTGTGGATGTAGAAGTAGCAAATCAAGGTTGTCCGGTCAAATTAGACGAAGGCCATCAGAGTCACGGGCAGAATGCTGTGATGATATCTCAGCTCTTTGCAAAACTGTGTACCATACAGAAATCAGATCTATCAACTATCCAATCAAATGAAGATTTCCAAGCTTTGGCTTCTGATGAACATGCAAATTCTGTCACCTCTTGCTCTAAAAACGCAGGTGATGAAAATGTTAAAGTCTGGTCAAAGAACAGCCGGAGAGTAAGCTCTGAGAACTTGGTGTTCATATGGGGGTTAGGGAAAAAGATGACAGCTGCAAAGCTGAAGAATGTCCTACAAAAGTCACACCCCGTCTTCGCGAGAGAGTTTGATGTTAAGTACATAGACCGGAGCTCTGCTATTTTGGTGTTTTGGGAGTCAGGTCCTTCAGAGACTTTCCTCAGTGCGGTCAACAATGAAGAGCAACTTGATGGTTCATTAAGAGAGATGGTTGCAGAAGGGCTAAGAGGGGCAGGTTACGAGACTTACAAGAGAGCTTGTAGATTAGGCTTCTGGGAGGCTGACTTGGCGGAATCTTTAGACAAAGCATTGGAATCTTCAGATACCGACCCTGATTCGGACACTAAACCATCAGAGATTGATTGGTCAAACGAATTAGCTATTAATTTTGATGAGCTATGA
Protein Sequence
- >AT3G25430.2 MQRRFLSSISATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENPILADSVTVSSSPATVADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILESRGTQAVRTVFMSSKEDKDLFKRELKDLEKEENRRVRGFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVDLSQFMKEISPLSNISNLPAAMSSLNRFFAPVDVEVANQGCPVKLDEGHQSHGQNAVMISQLFAKLCTIQKSDLSTIQSNEDFQALASDEHANSVTSCSKNAGDENVKVWSKNSRRVSSENLVFIWGLGKKMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDGSLREMVAEGLRGAGYETYKRACRLGFWEADLAESLDKALESSDTDPDSDTKPSEIDWSNELAINFDEL
- >AT3G25430.1 MQRRFLSSISATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENPILADSVTVSSSPATVADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILESRGTQAVRTVFMSSKEDKDLFKRELKDLEKEENRRVRGFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVDLSQFMKEISPLSNISNLPAAMSSLNRFFAPVDVEVANQGCPVKLDEGHQSHGQNAVMISQLFAKLCTIQKSDLSTIQSNEDFQALASDEHANSVTSCSKNAGDENVKVWSKNSRRVSSENLVFIWGLGKKMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDGSLREMVAEGLRGAGYETYKRACRLGFWEADLAESLDKALESSDTDPDSDTKPSEIDWSNELAINFDEL