Gene Details:
- Gene ID: AT3G25570
- Gene Symbol: SAMDC3
- Gene Name: S-adenosylmethionine decarboxylase 3
- Description: Adenosylmethionine decarboxylase family protein;(source:Araport11)
- Description: Derives_from AT3G25570;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Literature:
- Genomewide nonadditive gene regulation in Arabidopsis allotetraploids. DOI: 10.1534/genetics.105.047894 ; PMID: 16172500
- Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes. DOI: 10.1186/1741-7007-5-32 ; PMID: 17663791
- Phloem-specific expression of Yang cycle genes and identification of novel Yang cycle enzymes in Plantago and Arabidopsis. DOI: 10.1105/tpc.110.079657 ; PMID: 21540433
- BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome. DOI: 10.1093/bioinformatics/bts303 ; PMID: 22618534
Sequence:
cDNA Sequence
- >AT3G25570.1 TATTTTCATAGAAACTCAAACTTCAAAAGATAAATTTCCATCTTTTTTTTTATAATCATTTCTTGTTTTCGTGTTCAATCTAATAAAGGGTTTTGGGCTCTCAAGGGTTTTAATCAGATTGTTTGGTTCGTTAACTTAAAAGAATCCATTTCTTGACTTAGTTCTGGCTTTTTATTGCTCTGTTCTTCACAGGTGAATGAGAAATGGAGACTAAAGGTGGTAAAAAGAAGTCTAGTAATAGTAGTAGTAGGGACAGTCTTTTCTTCGAAGCTCCTCTTCGTTACAGCATTGAAGACGTTAGACCAAACGGTGGAATCAAGAAATTCAGATCTGCTGCTTACTCAAACATCACTGGAAAACCATCCTGATATTCCTCAATACGTTTTCTTCTTAACCACTTACTAACTGTGGTTGATCAATGTTCGCGATAAATCTTCGTTTTTTCTTGTTTTGTTCTCTTTCAAAACTCATTTTTCGATAGTCTCTTCGCCTTTTGAAAAATGGCGGTCTCTGCTACAGGTTTCGAAGGATTTGAGAAAAGGCTCGAAATCTCATTCTTTGAGACTACTGACTTTCTTGATCCCCAAGGAAAGAGTCTTCGTTCTCTTACCAAATCCCAGTTAGATGAGATCTTGACTCCAGCAGAGTGCACAATTGTTTCCTCTCTCACAAACTCTTTCGTTGACTCTTACGTGCTCTCTGAATCTAGTCTCTTTGTTTATCCTTACAAGATCATCATCAAAACATGCGGGACTACTAAGCTTCTCTTGTCGATCCCGCATATCCTTAGGCTGGCTGATTCACTTTGCCTCACTGTCAAATCTGTTCGCTACACTCGTGGTAGCTTTATTTTTCCGGGAGCTCAATCTTACCCTCACCGTAGCTTCTCAGAGGAAGTTGCTTTACTTGATGACTATTTTGGTAAGCTCAATGCAGGAAGCAAAGCTTTTGTGATGGGAGGTTCAGATAATAACCCTCAGAGATGGCATGTTTACTCTGCTTCTTCTACTGAAGAATCTGCGGTTTGCGATAAACCCGTGTACACATTGGAGATGTGTATGACTGGTCTAGACAATATAAAAGCTTCGGTGTTCTTTAAAACCAACTCTGTTTCAGCTTCTGAGATGACTATTAGCTCTGGGATCAGAAACATCCTTCCAGGCTCTGAAATCTGTGATTTTAACTTTGAACCGTGCGGTTACTCGATGAATTCGATTGAAGGGGATGCGGTTTCTACCATCCATGTGACCCCGGAAGATGGTTTTAGCTATGCAAGCTTTGAAACAGTTGGTTATGATCTAAAGGCTTTGAACTTTAAGGAGTTGGTGGATAGGGTTCTGGTTTGTTTTGGACCGGAAGAATTTTCTGTAGCGGTGCATGCTAATCTTGGAACCGAGGTATTGGCGTCTGATTGTGTAGCTGATGTGAACGGATACTTTAGCCAAGAGAGAGAACTAGAGGAGCTTGGACTTGGAGGTTCGGTTCTATACCAGAGATTTGTCAAGACTGTTGAATGTTGCTCACCAAAATCTACTCTTGGGTTCTGTTAGAAGAAGTGATTAAAGAAGAAGAGTGATCTATTTCTGGATTTATAGTTTTTTTTTTTTGTAAAGATCTTTTGTGTTTTGTTTTCGAATAAGAAAGAACATGTGATGTTCTGATGAAAGCATTTCTTGTTTATGTTCTCTGGTTGCTGCACCATAAATATTTTATGTTCTATGCTTTGTTGT
- >AT3G25570.2 TATTTTCATAGAAACTCAAACTTCAAAAGATAAATTTCCATCTTTTTTTTTATAATCATTTCTTGTTTTCGTGTTCAATCTAATAAAGGGTTTTGGGCTCTCAAGGGTTTTAATCAGATTGTTTGGTTCGTTAACTTAAAAGAATCCATTTCTTGACTTAGTTCTGGCTTTTTATTGCTCTGTTCTTCACAGGTGAATGAGAAATGGAGACTAAAGGTGGTAAAAAGAAGTCTAGTAATAGTAGTAGTAGGGACAGTCTTTTCTTCGAAGCTCCTCTTCGTTACAGCATTGAAGACGTTAGACCAAACGGTGGAATCAAGAAATTCAGATCTGCTGCTTACTCAAACATCACTGGAAAACCATCCTGATATTCCTCAATACGTTTTCTTCTTAACCACTTACTAACTGTGGTTGATCAATGTTCGCGATAAATCTTCGTTTTTTCTTGTTTTGTTCTCTTTCAAAACTCATTTTTCGATAGTCTCTTCGCCTTTTGAAAAATGGCGGTCTCTGCTACAGGTTTCGAAGGATTTGAGAAAAGGCTCGAAATCTCATTCTTTGAGACTACTGACTTTCTTGATCCCCAAGGAAAGAGTCTTCGTTCTCTTACCAAATCCCAGTTAGATGAGATCTTGACTCCAGCAGAGTGCACAATTGTTTCCTCTCTCACAAACTCTTTCGTTGACTCTTACGTGCTCTCTGAATCTAGTCTCTTTGTTTATCCTTACAAGATCATCATCAAAACATGCGGGACTACTAAGCTTCTCTTGTCGATCCCGCATATCCTTAGGCTGGCTGATTCACTTTGCCTCACTGTCAAATCTGTTCGCTACACTCGTGGTAGCTTTATTTTTCCGGGAGCTCAATCTTACCCTCACCGTAGCTTCTCAGAGGAAGTTGCTTTACTTGATGACTATTTTGGTAAGCTCAATGCAGGAAGCAAAGCTTTTGTGATGGGAGGTTCAGATAATAACCCTCAGAGATGGCATGTTTACTCTGCTTCTTCTACTGAAGAATCTGCGGTTTGCGATAAACCCGTGTACACATTGGAGATGTGTATGACTGGTCTAGACAATATAAAAGCTTCGGTGTTCTTTAAAACCAACTCTGTTTCAGCTTCTGAGATGACTATTAGCTCTGGGATCAGAAACATCCTTCCAGGCTCTGAAATCTGTGATTTTAACTTTGAACCGTGCGGTTACTCGATGAATTCGATTGAAGGGGATGCGGTTTCTACCATCCATGTGACCCCGGAAGATGGTTTTAGCTATGCAAGCTTTGAAACAGTTGGTTATGATCTAAAGGCTTTGAACTTTAAGGAGTTGGTGGATAGGGTTCTGGTTTGTTTTGGACCGGAAGAATTTTCTGTAGCGGTGCATGCTAATCTTGGAACCGAGGTATTGGCGTCTGATTGTGTAGCTGATGTGAACGGATACTTTAGCCAAGAGAGAGAACTAGAGGAGCTTGGACTTGGAGGTTCGGTTCTATACCAGAGATTTGTCAAGACTGTTGAATGTTGCTCACCAAAATCTACTCTTGGGTTCTGTTAGAAGAAGTGATTAAAGAAGAAGAGTGATCTATTTCTGGATTTATAGTTTTTTTTTTTTGTAAAGATCTTTTGTGTTTTGTTTTCGAATAAGAAAGAACATGTGATGTTCTGATGAAAGCATTTCTTGTTTATGTTCTCTGGTTGCTGCACCATAAATATTTTATGTTCTATGCTTTGTTGT
CDS Sequence
- >AT3G25570.1 ATGGCGGTCTCTGCTACAGGTTTCGAAGGATTTGAGAAAAGGCTCGAAATCTCATTCTTTGAGACTACTGACTTTCTTGATCCCCAAGGAAAGAGTCTTCGTTCTCTTACCAAATCCCAGTTAGATGAGATCTTGACTCCAGCAGAGTGCACAATTGTTTCCTCTCTCACAAACTCTTTCGTTGACTCTTACGTGCTCTCTGAATCTAGTCTCTTTGTTTATCCTTACAAGATCATCATCAAAACATGCGGGACTACTAAGCTTCTCTTGTCGATCCCGCATATCCTTAGGCTGGCTGATTCACTTTGCCTCACTGTCAAATCTGTTCGCTACACTCGTGGTAGCTTTATTTTTCCGGGAGCTCAATCTTACCCTCACCGTAGCTTCTCAGAGGAAGTTGCTTTACTTGATGACTATTTTGGTAAGCTCAATGCAGGAAGCAAAGCTTTTGTGATGGGAGGTTCAGATAATAACCCTCAGAGATGGCATGTTTACTCTGCTTCTTCTACTGAAGAATCTGCGGTTTGCGATAAACCCGTGTACACATTGGAGATGTGTATGACTGGTCTAGACAATATAAAAGCTTCGGTGTTCTTTAAAACCAACTCTGTTTCAGCTTCTGAGATGACTATTAGCTCTGGGATCAGAAACATCCTTCCAGGCTCTGAAATCTGTGATTTTAACTTTGAACCGTGCGGTTACTCGATGAATTCGATTGAAGGGGATGCGGTTTCTACCATCCATGTGACCCCGGAAGATGGTTTTAGCTATGCAAGCTTTGAAACAGTTGGTTATGATCTAAAGGCTTTGAACTTTAAGGAGTTGGTGGATAGGGTTCTGGTTTGTTTTGGACCGGAAGAATTTTCTGTAGCGGTGCATGCTAATCTTGGAACCGAGGTATTGGCGTCTGATTGTGTAGCTGATGTGAACGGATACTTTAGCCAAGAGAGAGAACTAGAGGAGCTTGGACTTGGAGGTTCGGTTCTATACCAGAGATTTGTCAAGACTGTTGAATGTTGCTCACCAAAATCTACTCTTGGGTTCTGTTAG
- >AT3G25570.2 ATGGCGGTCTCTGCTACAGGTTTCGAAGGATTTGAGAAAAGGCTCGAAATCTCATTCTTTGAGACTACTGACTTTCTTGATCCCCAAGGAAAGAGTCTTCGTTCTCTTACCAAATCCCAGTTAGATGAGATCTTGACTCCAGCAGAGTGCACAATTGTTTCCTCTCTCACAAACTCTTTCGTTGACTCTTACGTGCTCTCTGAATCTAGTCTCTTTGTTTATCCTTACAAGATCATCATCAAAACATGCGGGACTACTAAGCTTCTCTTGTCGATCCCGCATATCCTTAGGCTGGCTGATTCACTTTGCCTCACTGTCAAATCTGTTCGCTACACTCGTGGTAGCTTTATTTTTCCGGGAGCTCAATCTTACCCTCACCGTAGCTTCTCAGAGGAAGTTGCTTTACTTGATGACTATTTTGGTAAGCTCAATGCAGGAAGCAAAGCTTTTGTGATGGGAGGTTCAGATAATAACCCTCAGAGATGGCATGTTTACTCTGCTTCTTCTACTGAAGAATCTGCGGTTTGCGATAAACCCGTGTACACATTGGAGATGTGTATGACTGGTCTAGACAATATAAAAGCTTCGGTGTTCTTTAAAACCAACTCTGTTTCAGCTTCTGAGATGACTATTAGCTCTGGGATCAGAAACATCCTTCCAGGCTCTGAAATCTGTGATTTTAACTTTGAACCGTGCGGTTACTCGATGAATTCGATTGAAGGGGATGCGGTTTCTACCATCCATGTGACCCCGGAAGATGGTTTTAGCTATGCAAGCTTTGAAACAGTTGGTTATGATCTAAAGGCTTTGAACTTTAAGGAGTTGGTGGATAGGGTTCTGGTTTGTTTTGGACCGGAAGAATTTTCTGTAGCGGTGCATGCTAATCTTGGAACCGAGGTATTGGCGTCTGATTGTGTAGCTGATGTGAACGGATACTTTAGCCAAGAGAGAGAACTAGAGGAGCTTGGACTTGGAGGTTCGGTTCTATACCAGAGATTTGTCAAGACTGTTGAATGTTGCTCACCAAAATCTACTCTTGGGTTCTGTTAG
Protein Sequence
- >AT3G25570.1 MAVSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLTKSQLDEILTPAECTIVSSLTNSFVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILRLADSLCLTVKSVRYTRGSFIFPGAQSYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPVYTLEMCMTGLDNIKASVFFKTNSVSASEMTISSGIRNILPGSEICDFNFEPCGYSMNSIEGDAVSTIHVTPEDGFSYASFETVGYDLKALNFKELVDRVLVCFGPEEFSVAVHANLGTEVLASDCVADVNGYFSQERELEELGLGGSVLYQRFVKTVECCSPKSTLGFC
- >AT3G25570.2 MAVSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLTKSQLDEILTPAECTIVSSLTNSFVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILRLADSLCLTVKSVRYTRGSFIFPGAQSYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPVYTLEMCMTGLDNIKASVFFKTNSVSASEMTISSGIRNILPGSEICDFNFEPCGYSMNSIEGDAVSTIHVTPEDGFSYASFETVGYDLKALNFKELVDRVLVCFGPEEFSVAVHANLGTEVLASDCVADVNGYFSQERELEELGLGGSVLYQRFVKTVECCSPKSTLGFC