Gene Details:
- Gene ID: AT3G27860
- Gene Symbol: PDP6
- Gene Name: PWWP DOMAIN PROTEIN 6
- Description: Tudor/PWWP/MBT superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Literature:
- Arabidopsis PWWP domain proteins mediate H3K27 trimethylation on FLC and regulate flowering time. DOI: 10.1111/jipb.12630 ; PMID: 29314758
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Sequence:
cDNA Sequence
- >AT3G27860.1 TCAGACAAGTCTAAACCTTTTTCTTCTCGTTTTTATATTCTCCAGAGGAAAAAACCGAAAACTTTACGCCGCAGGAAACGAGGAAGACGGTGTTTCTAGATTCGCTGCTTCTTCAGAGAATCAAGAAGAATCTTTCTGGTTCTATGGGGAATATTCTACCGACTGGGTCTAGGGTTTCTGAGAACGAGGGTTCTGATGACAACAAATTGAAGGAGCACGATGTTAAGATGGAGAATGTTAAGGAAGACTCTGAACAAATTGGAGATAATGTGAGGAGTGGGGTTTCTTCATTGAGAGATAATTTTGAAGAATTAGAAAATGGGTTTCATGTGGGAGATTTTGTTTGGGGAGAAGAAGCCAATAGTCAACAATGGTGGCCAGGTCAGATTTATGATTCTTTAGATGCTTCAGACTTGGCTTTGAAGACAATGCAGAAAGGTAAATTACTTGTGGCGTATTTTGGAGATGGGAGCTTTTTTGGTTGGTGTAATCCATTGGAATTGAAACCGTTTCTTGAGAATTTCAAAGAGTTTTCGAAGATGAGTGATTCGAGAAGGTTTCTTCTTGCTGTGGAAGATGCTGTGAGAGAGATTGGTGAGCATGTTGAGAAGTTTTTGGTTTGTGATGACGCTGCTTTAGTTAGTTCTGTAGCTTTGAATTTGGGGATTAAGGATGGTGTTGTTGTGCCTGATGTTAGAAGAAAGATTATATCGTCTTTGGTTCTTGAAAACCCCGGTGTTGTTCTTGAAGATGTTAAAAGACTTGCCATGACGGTTAGATTTGATGATTTGTTAGAGATTGAGGTTTTGAGGAGGAAGATATCGGCGTTTTATCGGTGTAAAGGAAGGTTTGATTTAGCTAAGTTTGATGAACATCGATATATTATAGGACTTGAAGACAAAGAGCATGAATCTTGTCAGAGATTATTGAGAAAGTGTTCAGGTTTTGCTAGCAAAAAGAGGAAATGTGGTGATGTAGCAACCACTGGTTCTACTACTTTGAGGAAGAAAAGACTGAGTGAAGTTTCGAAGATTGAAACCGCTGAGAAAGAAATTAGTAACGGGAAGAGTTTGTCGTCGAGGAAGAGAAAGAGCAAAAGGGGTTTGGATGAGAATGATGATGATGGGATTGAGAAAAGAGAAGAGTCGAACGACTCAAACCATTTAGAAGAGAGTGAGAAGAAAGATGATTTAGCAACTCCATTGGCTTCAATCTGCAAAAGGCTCAATGTTGATGTTTCTTCATGTGTTAAAAGGTGTAATGGAAATGGCGAGGCAATATTGCAGACAGGTAAAAGAGAGAGGAAGAAAAGCAAGTATCTTTCTCCTGAATACATGACAGATTTTAGTTGCAGAGCGAGAAAGATCAAAATAGAATCTGCTGAATCAAGTCAGATCCAAGTAGCAGTGCGAATGACAACGCCTAATACAGCCATCGATGTTGTGAAACTGGGAGCTACACCAGAGGAAATGCTGGCTCTAATCCGTGCGGCTGCTCTCAATGCACAATATCCAAAAGACTATAATAGTACCTCATGTGACATGGTAAGAGAGTTTGTGTCCAATTATCGAAGCTTCAATAACAAGAGGAACCTTTCAGATGTAGAGAAGCAGCCTGAAGTGAAACAGGAAATAGTGGATGAGAAAGAGAAAACCAGAAATGAACCAGGTGTTGAGCTATATATCAAGACTGGTTTTGGTTCTACTCTGCCTTCAAAAGATGATTTGATCAAAACATACGAAAAGTTTGGAGCTTTAGACAAAGAGAGAAGCTATATGTTCAACAATAACTCATGCTCATGCGTTGCCTTTGTGAATGCATCTGATGGAGAAGAAGCTTTTAACAGGTCATTAGAGAAATGTCCATTTGCCACTACTTCCACAGTAACATTCAAGCTCGAGTATCCATCTTCTGCTTCATCTGAGAAGAAGGAAGCTGAAACAAGAAAGGGCGTAACAGAAATCGAGTGTTTGAAAGAGAAGCTCGAGGGGATAAGAGCATTGTTAGATCAATCAGAGGGAAAGATTACGGAAGAATTGAAAATGAAACTTGAAGATGAATCAAGAAACTTGCTTGACAAGGTAAGGAAGATGATTATTTGATCCTCTTAGTTAGTATTGTTTTTAATATTAGTTTAAAGGAAGACTTTTAGCTCTTAGGAGACGATAGGTGTCAAAACCTGTGAGTGAGACTATTTTGTGCAGACAAAACACAAAAGCTTGTAACGTGATAAATTTCAAGGCCCAATGGGCTTTTGATCTGAACCTTTATGGAATAGCTGGATTTTTCTGTTTTTCTCTTGTCGGCGAGAATATAAACCTAAAGAGGGTAACCCGGTA
- >AT3G27860.2 TCAGACAAGTCTAAACCTTTTTCTTCTCGTTTTTATATTCTCCAGAGGAAAAAACCGAAAACTTTACGCCGCAGGAAACGAGGAAGACGGTGTTTCTAGATTCGCTGCTTCTTCAGAGAATCAAGAAGAATCTTTCTGGTTCTATGGGGAATATTCTACCGACTGGGTCTAGGGTTTCTGAGAACGAGGGTTCTGATGACAACAAATTGAAGGAGCACGATGTTAAGATGGAGAATGTTAAGGAAGACTCTGAACAAATTGGAGATAATGTGAGGAGTGGGGTTTCTTCATTGAGAGATAATTTTGAAGAATTAGAAAATGGGTTTCATGTGGGAGATTTTGTTTGGGGAGAAGAAGCCAATAGTCAACAATGGTGGCCAGGTCAGATTTATGATTCTTTAGATGCTTCAGACTTGGCTTTGAAGACAATGCAGAAAGGTAAATTACTTGTGGCGTATTTTGGAGATGGGAGCTTTTTTGGTTGGTGTAATCCATTGGAATTGAAACCGTTTCTTGAGAATTTCAAAGAGTTTTCGAAGATGAGTGATTCGAGAAGGTTTCTTCTTGCTGTGGAAGATGCTGTGAGAGAGATTGGTGAGCATGTTGAGAAGTTTTTGGTTTGTGATGACGCTGCTTTAGTTAGTTCTGTAGCTTTGAATTTGGGGATTAAGGATGGTGTTGTTGTGCCTGATGTTAGAAGAAAGATTATATCGTCTTTGGTTCTTGAAAACCCCGGTGTTGTTCTTGAAGATGTTAAAAGACTTGCCATGACGGTTAGATTTGATGATTTGTTAGAGATTGAGGTTTTGAGGAGGAAGATATCGGCGTTTTATCGGTGTAAAGGAAGGTTTGATTTAGCTAAGTTTGATGAACATCGATATATTATAGGACTTGAAGACAAAGAGCATGAATCTTGTCAGAGATTATTGAGAAAGTGTTCAGGTTTTGCTAGCAAAAAGAGGAAATGTGGTGATGTAGCAACCACTGGTTCTACTACTTTGAGGAAGAAAAGACTGAGTGAAGTTTCGAAGATTGAAACCGCTGAGAAAGAAATTAGTAACGGGAAGAGTTTGTCGTCGAGGAAGAGAAAGAGCAAAAGGGGTTTGGATGAGAATGATGATGATGGGATTGAGAAAAGAGAAGAGTCGAACGACTCAAACCATTTAGAAGAGAGTGAGAAGAAAGATGATTTAGCAACTCCATTGGCTTCAATCTGCAAAAGGCTCAATGTTGATGTTTCTTCATGTGTTAAAAGGTGTAATGGAAATGGCGAGGCAATATTGCAGACAGGTAAAAGAGAGAGGAAGAAAAGCAAGTATCTTTCTCCTGAATACATGACAGATTTTAGTTGCAGAGCGAGAAAGATCAAAATAGAATCTGCTGAATCAAGTCAGATCCAAGTAGCAGTGCGAATGACAACGCCTAATACAGCCATCGATGTTGTGAAACTGGGAGCTACACCAGAGGAAATGCTGGCTCTAATCCGTGCGGCTGCTCTCAATGCACAATATCCAAAAGACTATAATAGTACCTCATGTGACATGGTAAGAGAGTTTGTGTCCAATTATCGAAGCTTCAATAACAAGAGGAACCTTTCAGATGTAGAGAAGCAGCCTGAAGTGAAACAGGAAATAGTGGATGAGAAAGAGAAAACCAGAAATGAACCAGGTGTTGAGCTATATATCAAGACTGGTTTTGGTTCTACTCTGCCTTCAAAAGATGATTTGATCAAAACATACGAAAAGTTTGGAGCTTTAGACAAAGAGAGAAGCTATATGTTCAACAATAACTCATGCTCATGCGTTGCCTTTGTGAATGCATCTGATGGAGAAGAAGCTTTTAACAGGTCATTAGAGAAATGTCCATTTGCCACTACTTCCACAGTAACATTCAAGCTCGAGTATCCATCTTCTGCTTCATCTGAGAAGAAGGAAGCTGAAACAAGAAAGGGCGTAACAGAAATCGAGTGTTTGAAAGAGAAGCTCGAGGGGATAAGAGCATTGTTAGATCAATCAGAGGGAAAGATTACGGAAGAATTGAAAATGAAACTTGAAGATGAATCAAGAAACTTGCTTGACAAGGTAAGGAAGATGATTATTTGATCCTCTTAGTTAGTATTGTTTTTAATATTAGTTTAAAGGAAGACTTTTAGCTCTTAGGAGACGATAGGTGTCAAAACCTGTGAGTGAGACTATTTTGTGCAGACAAAACACAAAAGCTTGTAACGTGATAAATTTCAAGGCCCAATGGGCTTTTGATCTGAACCTTTATGGAATAGCTGGATTTTTCTGTTTTTCTCTTGTCGGCGAGAATATAAACCTAAAGAGGGTAACCCGGTA
CDS Sequence
- >AT3G27860.1 ATGGGGAATATTCTACCGACTGGGTCTAGGGTTTCTGAGAACGAGGGTTCTGATGACAACAAATTGAAGGAGCACGATGTTAAGATGGAGAATGTTAAGGAAGACTCTGAACAAATTGGAGATAATGTGAGGAGTGGGGTTTCTTCATTGAGAGATAATTTTGAAGAATTAGAAAATGGGTTTCATGTGGGAGATTTTGTTTGGGGAGAAGAAGCCAATAGTCAACAATGGTGGCCAGGTCAGATTTATGATTCTTTAGATGCTTCAGACTTGGCTTTGAAGACAATGCAGAAAGGTAAATTACTTGTGGCGTATTTTGGAGATGGGAGCTTTTTTGGTTGGTGTAATCCATTGGAATTGAAACCGTTTCTTGAGAATTTCAAAGAGTTTTCGAAGATGAGTGATTCGAGAAGGTTTCTTCTTGCTGTGGAAGATGCTGTGAGAGAGATTGGTGAGCATGTTGAGAAGTTTTTGGTTTGTGATGACGCTGCTTTAGTTAGTTCTGTAGCTTTGAATTTGGGGATTAAGGATGGTGTTGTTGTGCCTGATGTTAGAAGAAAGATTATATCGTCTTTGGTTCTTGAAAACCCCGGTGTTGTTCTTGAAGATGTTAAAAGACTTGCCATGACGGTTAGATTTGATGATTTGTTAGAGATTGAGGTTTTGAGGAGGAAGATATCGGCGTTTTATCGGTGTAAAGGAAGGTTTGATTTAGCTAAGTTTGATGAACATCGATATATTATAGGACTTGAAGACAAAGAGCATGAATCTTGTCAGAGATTATTGAGAAAGTGTTCAGGTTTTGCTAGCAAAAAGAGGAAATGTGGTGATGTAGCAACCACTGGTTCTACTACTTTGAGGAAGAAAAGACTGAGTGAAGTTTCGAAGATTGAAACCGCTGAGAAAGAAATTAGTAACGGGAAGAGTTTGTCGTCGAGGAAGAGAAAGAGCAAAAGGGGTTTGGATGAGAATGATGATGATGGGATTGAGAAAAGAGAAGAGTCGAACGACTCAAACCATTTAGAAGAGAGTGAGAAGAAAGATGATTTAGCAACTCCATTGGCTTCAATCTGCAAAAGGCTCAATGTTGATGTTTCTTCATGTGTTAAAAGGTGTAATGGAAATGGCGAGGCAATATTGCAGACAGGTAAAAGAGAGAGGAAGAAAAGCAAGTATCTTTCTCCTGAATACATGACAGATTTTAGTTGCAGAGCGAGAAAGATCAAAATAGAATCTGCTGAATCAAGTCAGATCCAAGTAGCAGTGCGAATGACAACGCCTAATACAGCCATCGATGTTGTGAAACTGGGAGCTACACCAGAGGAAATGCTGGCTCTAATCCGTGCGGCTGCTCTCAATGCACAATATCCAAAAGACTATAATAGTACCTCATGTGACATGGTAAGAGAGTTTGTGTCCAATTATCGAAGCTTCAATAACAAGAGGAACCTTTCAGATGTAGAGAAGCAGCCTGAAGTGAAACAGGAAATAGTGGATGAGAAAGAGAAAACCAGAAATGAACCAGGTGTTGAGCTATATATCAAGACTGGTTTTGGTTCTACTCTGCCTTCAAAAGATGATTTGATCAAAACATACGAAAAGTTTGGAGCTTTAGACAAAGAGAGAAGCTATATGTTCAACAATAACTCATGCTCATGCGTTGCCTTTGTGAATGCATCTGATGGAGAAGAAGCTTTTAACAGGTCATTAGAGAAATGTCCATTTGCCACTACTTCCACAGTAACATTCAAGCTCGAGTATCCATCTTCTGCTTCATCTGAGAAGAAGGAAGCTGAAACAAGAAAGGGCGTAACAGAAATCGAGTGTTTGAAAGAGAAGCTCGAGGGGATAAGAGCATTGTTAGATCAATCAGAGGGAAAGATTACGGAAGAATTGAAAATGAAACTTGAAGATGAATCAAGAAACTTGCTTGACAAGGTAAGGAAGATGATTATTTGA
- >AT3G27860.2 ATGGGGAATATTCTACCGACTGGGTCTAGGGTTTCTGAGAACGAGGGTTCTGATGACAACAAATTGAAGGAGCACGATGTTAAGATGGAGAATGTTAAGGAAGACTCTGAACAAATTGGAGATAATGTGAGGAGTGGGGTTTCTTCATTGAGAGATAATTTTGAAGAATTAGAAAATGGGTTTCATGTGGGAGATTTTGTTTGGGGAGAAGAAGCCAATAGTCAACAATGGTGGCCAGGTCAGATTTATGATTCTTTAGATGCTTCAGACTTGGCTTTGAAGACAATGCAGAAAGGTAAATTACTTGTGGCGTATTTTGGAGATGGGAGCTTTTTTGGTTGGTGTAATCCATTGGAATTGAAACCGTTTCTTGAGAATTTCAAAGAGTTTTCGAAGATGAGTGATTCGAGAAGGTTTCTTCTTGCTGTGGAAGATGCTGTGAGAGAGATTGGTGAGCATGTTGAGAAGTTTTTGGTTTGTGATGACGCTGCTTTAGTTAGTTCTGTAGCTTTGAATTTGGGGATTAAGGATGGTGTTGTTGTGCCTGATGTTAGAAGAAAGATTATATCGTCTTTGGTTCTTGAAAACCCCGGTGTTGTTCTTGAAGATGTTAAAAGACTTGCCATGACGGTTAGATTTGATGATTTGTTAGAGATTGAGGTTTTGAGGAGGAAGATATCGGCGTTTTATCGGTGTAAAGGAAGGTTTGATTTAGCTAAGTTTGATGAACATCGATATATTATAGGACTTGAAGACAAAGAGCATGAATCTTGTCAGAGATTATTGAGAAAGTGTTCAGGTTTTGCTAGCAAAAAGAGGAAATGTGGTGATGTAGCAACCACTGGTTCTACTACTTTGAGGAAGAAAAGACTGAGTGAAGTTTCGAAGATTGAAACCGCTGAGAAAGAAATTAGTAACGGGAAGAGTTTGTCGTCGAGGAAGAGAAAGAGCAAAAGGGGTTTGGATGAGAATGATGATGATGGGATTGAGAAAAGAGAAGAGTCGAACGACTCAAACCATTTAGAAGAGAGTGAGAAGAAAGATGATTTAGCAACTCCATTGGCTTCAATCTGCAAAAGGCTCAATGTTGATGTTTCTTCATGTGTTAAAAGGTGTAATGGAAATGGCGAGGCAATATTGCAGACAGGTAAAAGAGAGAGGAAGAAAAGCAAGTATCTTTCTCCTGAATACATGACAGATTTTAGTTGCAGAGCGAGAAAGATCAAAATAGAATCTGCTGAATCAAGTCAGATCCAAGTAGCAGTGCGAATGACAACGCCTAATACAGCCATCGATGTTGTGAAACTGGGAGCTACACCAGAGGAAATGCTGGCTCTAATCCGTGCGGCTGCTCTCAATGCACAATATCCAAAAGACTATAATAGTACCTCATGTGACATGGTAAGAGAGTTTGTGTCCAATTATCGAAGCTTCAATAACAAGAGGAACCTTTCAGATGTAGAGAAGCAGCCTGAAGTGAAACAGGAAATAGTGGATGAGAAAGAGAAAACCAGAAATGAACCAGGTGTTGAGCTATATATCAAGACTGGTTTTGGTTCTACTCTGCCTTCAAAAGATGATTTGATCAAAACATACGAAAAGTTTGGAGCTTTAGACAAAGAGAGAAGCTATATGTTCAACAATAACTCATGCTCATGCGTTGCCTTTGTGAATGCATCTGATGGAGAAGAAGCTTTTAACAGGTCATTAGAGAAATGTCCATTTGCCACTACTTCCACAGTAACATTCAAGCTCGAGTATCCATCTTCTGCTTCATCTGAGAAGAAGGAAGCTGAAACAAGAAAGGGCGTAACAGAAATCGAGTGTTTGAAAGAGAAGCTCGAGGGGATAAGAGCATTGTTAGATCAATCAGAGGGAAAGATTACGGAAGAATTGAAAATGAAACTTGAAGATGAATCAAGAAACTTGCTTGACAAGGTAAGGAAGATGATTATTTGA
Protein Sequence
- >AT3G27860.1 MGNILPTGSRVSENEGSDDNKLKEHDVKMENVKEDSEQIGDNVRSGVSSLRDNFEELENGFHVGDFVWGEEANSQQWWPGQIYDSLDASDLALKTMQKGKLLVAYFGDGSFFGWCNPLELKPFLENFKEFSKMSDSRRFLLAVEDAVREIGEHVEKFLVCDDAALVSSVALNLGIKDGVVVPDVRRKIISSLVLENPGVVLEDVKRLAMTVRFDDLLEIEVLRRKISAFYRCKGRFDLAKFDEHRYIIGLEDKEHESCQRLLRKCSGFASKKRKCGDVATTGSTTLRKKRLSEVSKIETAEKEISNGKSLSSRKRKSKRGLDENDDDGIEKREESNDSNHLEESEKKDDLATPLASICKRLNVDVSSCVKRCNGNGEAILQTGKRERKKSKYLSPEYMTDFSCRARKIKIESAESSQIQVAVRMTTPNTAIDVVKLGATPEEMLALIRAAALNAQYPKDYNSTSCDMVREFVSNYRSFNNKRNLSDVEKQPEVKQEIVDEKEKTRNEPGVELYIKTGFGSTLPSKDDLIKTYEKFGALDKERSYMFNNNSCSCVAFVNASDGEEAFNRSLEKCPFATTSTVTFKLEYPSSASSEKKEAETRKGVTEIECLKEKLEGIRALLDQSEGKITEELKMKLEDESRNLLDKVRKMII
- >AT3G27860.2 MGNILPTGSRVSENEGSDDNKLKEHDVKMENVKEDSEQIGDNVRSGVSSLRDNFEELENGFHVGDFVWGEEANSQQWWPGQIYDSLDASDLALKTMQKGKLLVAYFGDGSFFGWCNPLELKPFLENFKEFSKMSDSRRFLLAVEDAVREIGEHVEKFLVCDDAALVSSVALNLGIKDGVVVPDVRRKIISSLVLENPGVVLEDVKRLAMTVRFDDLLEIEVLRRKISAFYRCKGRFDLAKFDEHRYIIGLEDKEHESCQRLLRKCSGFASKKRKCGDVATTGSTTLRKKRLSEVSKIETAEKEISNGKSLSSRKRKSKRGLDENDDDGIEKREESNDSNHLEESEKKDDLATPLASICKRLNVDVSSCVKRCNGNGEAILQTGKRERKKSKYLSPEYMTDFSCRARKIKIESAESSQIQVAVRMTTPNTAIDVVKLGATPEEMLALIRAAALNAQYPKDYNSTSCDMVREFVSNYRSFNNKRNLSDVEKQPEVKQEIVDEKEKTRNEPGVELYIKTGFGSTLPSKDDLIKTYEKFGALDKERSYMFNNNSCSCVAFVNASDGEEAFNRSLEKCPFATTSTVTFKLEYPSSASSEKKEAETRKGVTEIECLKEKLEGIRALLDQSEGKITEELKMKLEDESRNLLDKVRKMII