Gene Details:
- Gene ID: AT3G42960
- Gene Symbol: ASD, ATA1, TA1
- Gene Name: TAPETUM 1, TAPETUM1
- Description: TAPETUM 1;(source:Araport11)
- TAIR Accession: locus:2078541
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0042802 — enables — identical protein binding
- GO:0045491 — acts upstream of or within — xylan metabolic process
- GO:0005575 — is active in — cellular_component
- GO:0009059 — acts upstream of or within — macromolecule biosynthetic process
- GO:0048869 — acts upstream of or within — cellular developmental process
Function-related keywords:
Literature:
- Genome-wide analysis of spatial gene expression in Arabidopsis flowers. DOI: 10.1105/tpc.021741 ; PMID: 15100403
- Regulation of Arabidopsis tapetum development and function by DYSFUNCTIONAL TAPETUM1 (DYT1) encoding a putative bHLH transcription factor. DOI: 10.1242/dev.02463 ; PMID: 16831835
- CYP703 is an ancient cytochrome P450 in land plants catalyzing in-chain hydroxylation of lauric acid to provide building blocks for sporopollenin synthesis in pollen. DOI: 10.1105/tpc.106.045948 ; PMID: 17496121
- ROXY1 and ROXY2, two Arabidopsis glutaredoxin genes, are required for anther development. DOI: 10.1111/j.1365-313X.2007.03375.x ; PMID: 18036205
- The ABORTED MICROSPORES regulatory network is required for postmeiotic male reproductive development in Arabidopsis thaliana. DOI: 10.1105/tpc.109.071803 ; PMID: 20118226
Sequence:
cDNA Sequence
- >AT3G42960.1 CAAGATCGTCAAGAGACAGTAAACCTAAAATGGCGAACTCAGACAAAAGATTATTCGAGAAGGTAGCTATAATAACCGGAGGAGCAAGAGGGATAGGAGCGGCCACGGCGAGATTGTTCACAGAGAATGGCGCGTATGTGATAGTCGCGGATATCCTTGAGAATGAAGGCATCCTTGTGGCGGAATCGATCGGTGGGTGTTACGTTCATTGTGACGTATCGAAGGAGGCTGATGTTGAGGCGGCAGTGGAGCTAGCAATGAGACGTAAAGGTAGACTAGATGTGATGTTCAACAATGCCGGGATGTCGCTTAACGAAGGTAGTATCATGGGGATGGACGTGGACATGGTTAACAAACTTGTCTCGGTTAATGTCAATGGTGTTTTGCATGGTATCAAACATGCCGCTAAGGCCATGATCAAAGGGGGACGAGGAGGCTCGATAATATGCACATCGAGCTCATCAGGGCTAATGGGAGGACTTGGAGGACATGCGTATACGCTCTCCAAAGGAGCCATCAACGGGGTGGTGAGGACAACGGCGTGCGAGCTTGGGTCTCACGGCATCCGTGTGAATAGCATCTCTCCTCATGGAGTTCCCACTGACATCTTGGTTAATGCGTACCGTAAGTTCCTTAACCATGACAAACTCAACGTCGCTGAGGTCACCGACATTATTGCTGAGAAAGGGAGTTTGCTGACCGGAAGAGCCGGTACTGTGGAGGACGTAGCTCAAGCAGCTTTGTTTCTTGCAAGCCAAGAATCGTCGGGGTTCATTACCGGACATAACTTGGTTGTTGATGGTGGTTACACATCTGCCACTAGTACTATGAGATTTATCTACAACTAGTTTTCGTTTGGTGGTGTTTCCTTTTCAAAGTTGTTCTTTG
CDS Sequence
- >AT3G42960.1 ATGGCGAACTCAGACAAAAGATTATTCGAGAAGGTAGCTATAATAACCGGAGGAGCAAGAGGGATAGGAGCGGCCACGGCGAGATTGTTCACAGAGAATGGCGCGTATGTGATAGTCGCGGATATCCTTGAGAATGAAGGCATCCTTGTGGCGGAATCGATCGGTGGGTGTTACGTTCATTGTGACGTATCGAAGGAGGCTGATGTTGAGGCGGCAGTGGAGCTAGCAATGAGACGTAAAGGTAGACTAGATGTGATGTTCAACAATGCCGGGATGTCGCTTAACGAAGGTAGTATCATGGGGATGGACGTGGACATGGTTAACAAACTTGTCTCGGTTAATGTCAATGGTGTTTTGCATGGTATCAAACATGCCGCTAAGGCCATGATCAAAGGGGGACGAGGAGGCTCGATAATATGCACATCGAGCTCATCAGGGCTAATGGGAGGACTTGGAGGACATGCGTATACGCTCTCCAAAGGAGCCATCAACGGGGTGGTGAGGACAACGGCGTGCGAGCTTGGGTCTCACGGCATCCGTGTGAATAGCATCTCTCCTCATGGAGTTCCCACTGACATCTTGGTTAATGCGTACCGTAAGTTCCTTAACCATGACAAACTCAACGTCGCTGAGGTCACCGACATTATTGCTGAGAAAGGGAGTTTGCTGACCGGAAGAGCCGGTACTGTGGAGGACGTAGCTCAAGCAGCTTTGTTTCTTGCAAGCCAAGAATCGTCGGGGTTCATTACCGGACATAACTTGGTTGTTGATGGTGGTTACACATCTGCCACTAGTACTATGAGATTTATCTACAACTAG
Protein Sequence
- >AT3G42960.1 MANSDKRLFEKVAIITGGARGIGAATARLFTENGAYVIVADILENEGILVAESIGGCYVHCDVSKEADVEAAVELAMRRKGRLDVMFNNAGMSLNEGSIMGMDVDMVNKLVSVNVNGVLHGIKHAAKAMIKGGRGGSIICTSSSSGLMGGLGGHAYTLSKGAINGVVRTTACELGSHGIRVNSISPHGVPTDILVNAYRKFLNHDKLNVAEVTDIIAEKGSLLTGRAGTVEDVAQAALFLASQESSGFITGHNLVVDGGYTSATSTMRFIYN