Gene Details:
- Gene ID: AT3G44240
- Gene Symbol: CAF1f
- Gene Name: CCR4-associated factor 1f
- Description: Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , petiole , hypocotyl , collective leaf structure
Literature:
- Arabidopsis deadenylases AtCAF1a and AtCAF1b play overlapping and distinct roles in mediating environmental stress responses. DOI: 10.1104/pp.109.149005 ; PMID: 19955262
- Identification of Arabidopsis CCR4-NOT Complexes with Pumilio RNA-Binding Proteins, APUM5 and APUM2. DOI: 10.1093/pcp/pcz089 ; PMID: 31093672
Sequence:
cDNA Sequence
- >AT3G44240.1 ATGAGTTTAATAGAAGATTGTCTAAGAAGCTACCGTTTCATTGCAATAGACACAGAGTTTCCATCTACTTTGAGGGAAACTACACAACATGCGACAGATGAGGAACGTTACATGGATATGAGTTTTAGTGTGGACAGAGCAAAATTGATCCAGTTAGGGCTAACTCTGTTCGATATCAATGGAAGAATTGGAGGAACATGGGAGATCAATTTCTCTGATTTCGGAGTTGACGATGCTAGAAACGAGAAATCCATTGAGTTCCTTAGACGCAACGGTCTAGATCTAAGGAAGATTAGAGAAGAGGGCATCAGAATCGAGGGTTTCTTCTCGGAGATGTTTTGGATGCTGAAGAAGACGAGGAGGAATATTACTTGGGTCACGTTTCATGGATCTTACGACATCGCCTATTTACTCAAGGGTTTCACCGGAGAAGCTTTACCTGTGACTTCAGAGAGGTTTTCTAAAGCGGTCGCGAGAGTTCTCGGTTCTGTTTACGATTTGAAAGTCATGGCGGGTCGATGTGAAGGACTAAGTAGCAGGCTTGGTTTGGAGACTCTAGCGCATGAGTTCGGACTTAACCGTGTTGGTACTGCACACCACGCCGGTTCCAATAACGAGTTAACGGCGATGGTTTTCGCTAAGGTACTGTCTCCGTTTCCTCTCTTTCTTCGTTTTGGTTCTTTGGAGTTAAGAACTATAGAAAGTGAAGCAATAGTGTAG
CDS Sequence
- >AT3G44240.1 ATGAGTTTAATAGAAGATTGTCTAAGAAGCTACCGTTTCATTGCAATAGACACAGAGTTTCCATCTACTTTGAGGGAAACTACACAACATGCGACAGATGAGGAACGTTACATGGATATGAGTTTTAGTGTGGACAGAGCAAAATTGATCCAGTTAGGGCTAACTCTGTTCGATATCAATGGAAGAATTGGAGGAACATGGGAGATCAATTTCTCTGATTTCGGAGTTGACGATGCTAGAAACGAGAAATCCATTGAGTTCCTTAGACGCAACGGTCTAGATCTAAGGAAGATTAGAGAAGAGGGCATCAGAATCGAGGGTTTCTTCTCGGAGATGTTTTGGATGCTGAAGAAGACGAGGAGGAATATTACTTGGGTCACGTTTCATGGATCTTACGACATCGCCTATTTACTCAAGGGTTTCACCGGAGAAGCTTTACCTGTGACTTCAGAGAGGTTTTCTAAAGCGGTCGCGAGAGTTCTCGGTTCTGTTTACGATTTGAAAGTCATGGCGGGTCGATGTGAAGGACTAAGTAGCAGGCTTGGTTTGGAGACTCTAGCGCATGAGTTCGGACTTAACCGTGTTGGTACTGCACACCACGCCGGTTCCAATAACGAGTTAACGGCGATGGTTTTCGCTAAGGTACTGTCTCCGTTTCCTCTCTTTCTTCGTTTTGGTTCTTTGGAGTTAAGAACTATAGAAAGTGAAGCAATAGTGTAG
Protein Sequence
- >AT3G44240.1 MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIGGTWEINFSDFGVDDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLSSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPLFLRFGSLELRTIESEAIV