Gene Details:
- Gene ID: AT3G47020
- Gene Symbol: SGIP1
- Gene Name: , SUPPRESSOR OF GENE SILENCING 3 (SGS3)-INTERACTING PROTEIN 1
- Description: F-box and associated interaction domains-containing protein;(source:Araport11)
- TAIR Accession: locus:2075651
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0010494 — colocalizes with — cytoplasmic stress granule
- GO:0005634 — located in — nucleus
- GO:0010494 — located in — cytoplasmic stress granule
- GO:0043161 — involved in — proteasome-mediated ubiquitin-dependent protein catabolic process
- GO:0009408 — acts upstream of or within — response to heat
- GO:0010286 — involved in — heat acclimation
- GO:0009408 — involved in — response to heat
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0005515 — enables — protein binding
Germplasm Phenotype:
- SALK_017126C — Impaired heat-induced decrease in SGS3 abundance and delayed SGS3 degradation.
Literature:
- An H3K27me3 demethylase-HSFA2 regulatory loop orchestrates transgenerational thermomemory in Arabidopsis. DOI: 10.1038/s41422-019-0145-8 ; PMID: 30778176
Sequence:
cDNA Sequence
- >AT3G47020.1 ATGGAAAAATCGCAGAAGCAAGTCACCCGCCCAAGCAACTCCCGAAGAGAATACTCGAAGGAGATACCAATTGATCTGTTGATTGAGATTTTTTCAAGATTGTCTACGGGAGACATTGCTAGGTGTCGTTGCGTGTCTAAGATCTGGTCTTCCGTACCGCGTCTGCGAGATTTCACTGAACTATTCCTGAAAATATCTTCGGCTCGGCCGCGTATATTATTTACCTTCCTACATAACGGTATGGTTCCTTCCTATGACAATGAGATTCATGCCCCTGTACGTGGGTTTCTTTGTAGCAAAGCTAGTGTCTATAACCCTAGCACAGGAGAGTGTGCATACCCTTACCTAGAGCTTCTAGGGCTTTGGGACATTCTCCCCGTAGATGCTGAGAATCTTGCAAAGAAAGTGTGCGTGCCCAAGGTATTGTTGGCGTCCGAGGATTTTGCATGTCGAGTTTCAACATTAGGAACGGAAGAAGTTTGCTGGAGAATGATCCAATGCTCGCTACCCCATAGGCCTTTTCGTGATGAGATATGCATTGATGGAGTTTTGTACTATTTAGCTAATTGCAAAGGTAAATTAGGCATACTATGGCCAGTGCCCTCTGGAGATCAGAGTCATGAAGTCACAAGAAGTTTTGTGTTGCGGATTCTGGAAGATGCCAATAAACTGATATGGTCGAGGACTGTCTACACATTGTCTTTTAATTGGAAGAAACTTGTGAATAAATCTCTATACATTGTTGGGATGACTAGTGGAGGTGAAATTGTGTTATCTACACGCCATCTAAACTATCCTTTCTACATTGTCTACTATAATCCGGTGAACAACACTGCGGCAAAAAATGAAATCCAGTTTGGGAATATCGCTAATAAGAAGGCTGAAAACTCAAGGATTTATACGTTTATAGACCATGTAGAGAATGTAGAGCATATGGATTAA
CDS Sequence
- >AT3G47020.1 ATGGAAAAATCGCAGAAGCAAGTCACCCGCCCAAGCAACTCCCGAAGAGAATACTCGAAGGAGATACCAATTGATCTGTTGATTGAGATTTTTTCAAGATTGTCTACGGGAGACATTGCTAGGTGTCGTTGCGTGTCTAAGATCTGGTCTTCCGTACCGCGTCTGCGAGATTTCACTGAACTATTCCTGAAAATATCTTCGGCTCGGCCGCGTATATTATTTACCTTCCTACATAACGGTATGGTTCCTTCCTATGACAATGAGATTCATGCCCCTGTACGTGGGTTTCTTTGTAGCAAAGCTAGTGTCTATAACCCTAGCACAGGAGAGTGTGCATACCCTTACCTAGAGCTTCTAGGGCTTTGGGACATTCTCCCCGTAGATGCTGAGAATCTTGCAAAGAAAGTGTGCGTGCCCAAGGTATTGTTGGCGTCCGAGGATTTTGCATGTCGAGTTTCAACATTAGGAACGGAAGAAGTTTGCTGGAGAATGATCCAATGCTCGCTACCCCATAGGCCTTTTCGTGATGAGATATGCATTGATGGAGTTTTGTACTATTTAGCTAATTGCAAAGGTAAATTAGGCATACTATGGCCAGTGCCCTCTGGAGATCAGAGTCATGAAGTCACAAGAAGTTTTGTGTTGCGGATTCTGGAAGATGCCAATAAACTGATATGGTCGAGGACTGTCTACACATTGTCTTTTAATTGGAAGAAACTTGTGAATAAATCTCTATACATTGTTGGGATGACTAGTGGAGGTGAAATTGTGTTATCTACACGCCATCTAAACTATCCTTTCTACATTGTCTACTATAATCCGGTGAACAACACTGCGGCAAAAAATGAAATCCAGTTTGGGAATATCGCTAATAAGAAGGCTGAAAACTCAAGGATTTATACGTTTATAGACCATGTAGAGAATGTAGAGCATATGGATTAA
Protein Sequence
- >AT3G47020.1 MEKSQKQVTRPSNSRREYSKEIPIDLLIEIFSRLSTGDIARCRCVSKIWSSVPRLRDFTELFLKISSARPRILFTFLHNGMVPSYDNEIHAPVRGFLCSKASVYNPSTGECAYPYLELLGLWDILPVDAENLAKKVCVPKVLLASEDFACRVSTLGTEEVCWRMIQCSLPHRPFRDEICIDGVLYYLANCKGKLGILWPVPSGDQSHEVTRSFVLRILEDANKLIWSRTVYTLSFNWKKLVNKSLYIVGMTSGGEIVLSTRHLNYPFYIVYYNPVNNTAAKNEIQFGNIANKKAENSRIYTFIDHVENVEHMD