Gene Details:

  • Gene ID: AT3G47020
  • Gene Symbol: SGIP1
  • Gene Name: , SUPPRESSOR OF GENE SILENCING 3 (SGS3)-INTERACTING PROTEIN 1
  • Description: F-box and associated interaction domains-containing protein;(source:Araport11)
  • TAIR Accession: locus:2075651
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Gene Ontology:

  • GO:0010494  — colocalizes with — cytoplasmic stress granule
  • GO:0005634  — located in — nucleus
  • GO:0010494  — located in — cytoplasmic stress granule
  • GO:0043161  — involved in — proteasome-mediated ubiquitin-dependent protein catabolic process
  • GO:0009408  — acts upstream of or within — response to heat
  • GO:0010286  — involved in — heat acclimation
  • GO:0009408  — involved in — response to heat
  • GO:0061630  — enables — ubiquitin protein ligase activity
  • GO:0005515  — enables — protein binding

Germplasm Phenotype:

  • SALK_017126C  — Impaired heat-induced decrease in SGS3 abundance and delayed SGS3 degradation.

Literature:

Sequence:

cDNA Sequence
  • >AT3G47020.1 ATGGAAAAATCGCAGAAGCAAGTCACCCGCCCAAGCAACTCCCGAAGAGAATACTCGAAGGAGATACCAATTGATCTGTTGATTGAGATTTTTTCAAGATTGTCTACGGGAGACATTGCTAGGTGTCGTTGCGTGTCTAAGATCTGGTCTTCCGTACCGCGTCTGCGAGATTTCACTGAACTATTCCTGAAAATATCTTCGGCTCGGCCGCGTATATTATTTACCTTCCTACATAACGGTATGGTTCCTTCCTATGACAATGAGATTCATGCCCCTGTACGTGGGTTTCTTTGTAGCAAAGCTAGTGTCTATAACCCTAGCACAGGAGAGTGTGCATACCCTTACCTAGAGCTTCTAGGGCTTTGGGACATTCTCCCCGTAGATGCTGAGAATCTTGCAAAGAAAGTGTGCGTGCCCAAGGTATTGTTGGCGTCCGAGGATTTTGCATGTCGAGTTTCAACATTAGGAACGGAAGAAGTTTGCTGGAGAATGATCCAATGCTCGCTACCCCATAGGCCTTTTCGTGATGAGATATGCATTGATGGAGTTTTGTACTATTTAGCTAATTGCAAAGGTAAATTAGGCATACTATGGCCAGTGCCCTCTGGAGATCAGAGTCATGAAGTCACAAGAAGTTTTGTGTTGCGGATTCTGGAAGATGCCAATAAACTGATATGGTCGAGGACTGTCTACACATTGTCTTTTAATTGGAAGAAACTTGTGAATAAATCTCTATACATTGTTGGGATGACTAGTGGAGGTGAAATTGTGTTATCTACACGCCATCTAAACTATCCTTTCTACATTGTCTACTATAATCCGGTGAACAACACTGCGGCAAAAAATGAAATCCAGTTTGGGAATATCGCTAATAAGAAGGCTGAAAACTCAAGGATTTATACGTTTATAGACCATGTAGAGAATGTAGAGCATATGGATTAA
CDS Sequence
  • >AT3G47020.1 ATGGAAAAATCGCAGAAGCAAGTCACCCGCCCAAGCAACTCCCGAAGAGAATACTCGAAGGAGATACCAATTGATCTGTTGATTGAGATTTTTTCAAGATTGTCTACGGGAGACATTGCTAGGTGTCGTTGCGTGTCTAAGATCTGGTCTTCCGTACCGCGTCTGCGAGATTTCACTGAACTATTCCTGAAAATATCTTCGGCTCGGCCGCGTATATTATTTACCTTCCTACATAACGGTATGGTTCCTTCCTATGACAATGAGATTCATGCCCCTGTACGTGGGTTTCTTTGTAGCAAAGCTAGTGTCTATAACCCTAGCACAGGAGAGTGTGCATACCCTTACCTAGAGCTTCTAGGGCTTTGGGACATTCTCCCCGTAGATGCTGAGAATCTTGCAAAGAAAGTGTGCGTGCCCAAGGTATTGTTGGCGTCCGAGGATTTTGCATGTCGAGTTTCAACATTAGGAACGGAAGAAGTTTGCTGGAGAATGATCCAATGCTCGCTACCCCATAGGCCTTTTCGTGATGAGATATGCATTGATGGAGTTTTGTACTATTTAGCTAATTGCAAAGGTAAATTAGGCATACTATGGCCAGTGCCCTCTGGAGATCAGAGTCATGAAGTCACAAGAAGTTTTGTGTTGCGGATTCTGGAAGATGCCAATAAACTGATATGGTCGAGGACTGTCTACACATTGTCTTTTAATTGGAAGAAACTTGTGAATAAATCTCTATACATTGTTGGGATGACTAGTGGAGGTGAAATTGTGTTATCTACACGCCATCTAAACTATCCTTTCTACATTGTCTACTATAATCCGGTGAACAACACTGCGGCAAAAAATGAAATCCAGTTTGGGAATATCGCTAATAAGAAGGCTGAAAACTCAAGGATTTATACGTTTATAGACCATGTAGAGAATGTAGAGCATATGGATTAA
Protein Sequence
  • >AT3G47020.1 MEKSQKQVTRPSNSRREYSKEIPIDLLIEIFSRLSTGDIARCRCVSKIWSSVPRLRDFTELFLKISSARPRILFTFLHNGMVPSYDNEIHAPVRGFLCSKASVYNPSTGECAYPYLELLGLWDILPVDAENLAKKVCVPKVLLASEDFACRVSTLGTEEVCWRMIQCSLPHRPFRDEICIDGVLYYLANCKGKLGILWPVPSGDQSHEVTRSFVLRILEDANKLIWSRTVYTLSFNWKKLVNKSLYIVGMTSGGEIVLSTRHLNYPFYIVYYNPVNNTAAKNEIQFGNIANKKAENSRIYTFIDHVENVEHMD