Gene Details:
- Gene ID: AT3G47690
- Gene Symbol: AtEB1a, ATEB1H2, EB1A
- Gene Name: ARABIDOPSIS THALIANA MICROTUBULE END BINDING PROTEIN EB1A, ATEB1-HOMOLOG2, microtubule end binding protein EB1A
- Description: microtubule end binding protein EB1A;(source:Araport11)
- TAIR Accession: locus:2100417
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0051233 — is active in — spindle midzone
- GO:0009652 — involved in — thigmotropism
- GO:0051225 — involved in — spindle assembly
- GO:0035371 — is active in — microtubule plus-end
- GO:0009652 — acts upstream of or within — thigmotropism
- GO:0009524 — located in — phragmoplast
- GO:0001578 — acts upstream of or within — microtubule bundle formation
- GO:0031110 — involved in — regulation of microtubule polymerization or depolymerization
- GO:0009574 — located in — preprophase band
- GO:0005876 — located in — spindle microtubule
- GO:0008017 — enables — microtubule binding
- GO:0005815 — is active in — microtubule organizing center
- GO:0051010 — enables — microtubule plus-end binding
- GO:0005815 — located in — microtubule organizing center
- GO:0005737 — located in — cytoplasm
- GO:0010005 — located in — cortical microtubule, transverse to long axis
- GO:0005881 — is active in — cytoplasmic microtubule
Germplasm Phenotype:
- eb1a-1 — When plants are grown on inclined agar plates root growth is skewed to the left forming clockwise loops with twisted epidermal cell files.
Literature:
- Molecular dissection of plant cytokinesis and phragmoplast structure: a survey of GFP-tagged proteins. DOI: 10.1111/j.1365-313X.2004.02222.x ; PMID: 15469496
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Arabidopsis cortical microtubules are initiated along, as well as branching from, existing microtubules. DOI: 10.1105/tpc.109.069716 ; PMID: 19706794
- AGRONOMICS1: a new resource for Arabidopsis transcriptome profiling. DOI: 10.1104/pp.109.150185 ; PMID: 20032078
- The Arabidopsis mitogen-activated protein kinase 6 is associated with γ-tubulin on microtubules, phosphorylates EB1c and maintains spindle orientation under nitrosative stress. DOI: 10.1111/nph.13501 ; PMID: 26061286
- Screening Arabidopsis mutants in genes useful for phytoremediation. DOI: 10.1016/j.jhazmat.2017.04.021 ; PMID: 28441590
Sequence:
cDNA Sequence
- >AT3G47690.1 ATCTTTCCAGTTGCCGTTGCCAGCCGTTTCCTACTTGTGCTTTTTCACTTTTCCGTTCTCTCAAACCTTTTTTCTCTGCTTCCGTTTCGTTTCTCCGTTCAAAACAAGATCGAATCATAAAAAGTTTCCTCCTTTTTTTCTTCTCGAAACAAAAGAGAATTCTTGACGTCTTCTACTCCATTTTCCATCAATACCCATTTCTTCTATCGCTCTCGTTTCCAAGAAAAAAGAGGGTTTTAGAGAGAAGCAAAACTCAAATGGCGACGAACATCGGAATGATGGATAGTGCATACTTCGTCGGAAGAAACGAGATTCTGACTTGGATTAATGATCGTCTTCACCTCAATCTCTCTCGCGTCGAAGAGGCTGCATCTGGTGCTGTGCAATGTCAGATGCTTGATATGACATTTCCAGGAGTTGTGCCAATGCACAAGGTTAACTTTGATGCAAAGAACGAGTACGATATGATACAAAACTACAAGGTCTTGCAAGATGTGTTCAACAAGCTGAAAATTACAAAGCCATTGGAAATTAACAGGCTTGTCAAAGGCCGGCCACTGGATAACTTGGAGTTTCTGCAATGGCTGAAACGTTTCTGTGATTCCATTAATGGTGGCATTATGAATGAGAACTATAATCCAGTGGAGCGAAGATCAAGAAATGGTAAAGAGAGGAGTGTGAAGGGATCTAATAAGATTCCAAAGTCACTGCAAACAAACAATAACCATCCTCCACCCAATTCCAGTTCAGTTGGTCTTAGCAAAGCATCAGGGCCCAAGTCAGCAAAAGCAGCTGAAGTGCAGGCTTTGTCGAAGGAGCTCGTGGATCTCAAGATCTCTACTGATCTCTTGGAAAAAGAAAGAGACTTTTACTTCTCCAAGCTCCGGGATGTAGAGATACTCTGCCAAACTCCTGAGCTAGATGATCTTCCGATAGTGGTAGCAGTGAAGAAGATACTGTATGCAACCGATGCAAATGAATCTGCATTAGAAGACGCTCAAGAGTACCTAAACCAGTCCCTAGGAGTTGAAGATGATGAAGCTGAAGGAAACGGAGAACAACTGGAAGAAGAAAAGACTCAAGCCTAAGCTCTGACTATTAACAATCCTAAGTAGAAGGGTGACGAACAATGGCTGGCCATGGCCTTCTCTTCCAAGTTTCTTTTGTGAAAGGAAACTAACTGAAACTTGAAGATGAATGAGCTTCTTCTATTAGAAAGATTAGTTTGAAAACAAAGAGACTTATTTTTGTTACTATTCAAGAGGCTTTTTTCTTGTTTTAAAACAATACTTTGACCCAAAGTGAGAATTTAAGTGTCGGTGCTTCCT
CDS Sequence
- >AT3G47690.1 ATGGCGACGAACATCGGAATGATGGATAGTGCATACTTCGTCGGAAGAAACGAGATTCTGACTTGGATTAATGATCGTCTTCACCTCAATCTCTCTCGCGTCGAAGAGGCTGCATCTGGTGCTGTGCAATGTCAGATGCTTGATATGACATTTCCAGGAGTTGTGCCAATGCACAAGGTTAACTTTGATGCAAAGAACGAGTACGATATGATACAAAACTACAAGGTCTTGCAAGATGTGTTCAACAAGCTGAAAATTACAAAGCCATTGGAAATTAACAGGCTTGTCAAAGGCCGGCCACTGGATAACTTGGAGTTTCTGCAATGGCTGAAACGTTTCTGTGATTCCATTAATGGTGGCATTATGAATGAGAACTATAATCCAGTGGAGCGAAGATCAAGAAATGGTAAAGAGAGGAGTGTGAAGGGATCTAATAAGATTCCAAAGTCACTGCAAACAAACAATAACCATCCTCCACCCAATTCCAGTTCAGTTGGTCTTAGCAAAGCATCAGGGCCCAAGTCAGCAAAAGCAGCTGAAGTGCAGGCTTTGTCGAAGGAGCTCGTGGATCTCAAGATCTCTACTGATCTCTTGGAAAAAGAAAGAGACTTTTACTTCTCCAAGCTCCGGGATGTAGAGATACTCTGCCAAACTCCTGAGCTAGATGATCTTCCGATAGTGGTAGCAGTGAAGAAGATACTGTATGCAACCGATGCAAATGAATCTGCATTAGAAGACGCTCAAGAGTACCTAAACCAGTCCCTAGGAGTTGAAGATGATGAAGCTGAAGGAAACGGAGAACAACTGGAAGAAGAAAAGACTCAAGCCTAA
Protein Sequence
- >AT3G47690.1 MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKVNFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGGIMNENYNPVERRSRNGKERSVKGSNKIPKSLQTNNNHPPPNSSSVGLSKASGPKSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVAVKKILYATDANESALEDAQEYLNQSLGVEDDEAEGNGEQLEEEKTQA