Gene Details:
- Gene ID: AT3G48195
- Gene Symbol: SNX5
- Gene Name: SORTING NEXIN 5
- Description: Phox (PX) domain-containing protein;(source:Araport11)
- TAIR Accession: locus:504955665
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0035091 — enables — phosphatidylinositol binding
- GO:0005737 — located in — cytoplasm
- GO:0005622 — located in — intracellular anatomical structure
Literature:
- The retromer, sorting nexins and the plant endomembrane protein trafficking. DOI: 10.1242/jcs.203695 ; PMID: 29061884
Sequence:
cDNA Sequence
- >AT3G48195.1 GAAATAGTTGAAATTTTCAGAAATCGTCTTGTGTCAATCCTGCTTACATGATTCCTAAGCCTGGTCTTGTTTGGCTCCGAGAAAATTCAATTCGAAGGAGACGAAGAAGCTCCAAGCATATAGACGAAGCTAATCTACGCATCGTCCAGCTCTTATCGTGCACCTAAATCTCAGTTGTTCTCCAAGTTGCTTCTTCTTTCTCAAGTACTTGGCTCGATCAATTTCAATTTTCAAAACCCGATTGGGGATTTTGGCGTGCTTGGATCTTCATCAATTGGTGTGAGAATCCGTCTCCGTTCGTTATCCATCGATCGGTTTTGTATAATTTACTGTTTTATTTCCGGTTGATTCGGTTTTGGTTTTGGTTTCAAATGATCAATGGAGAGGAGGAATCATCGAGAGTTGATTCGCCAGGTTCGTCGTTACATTACTCGTCTTGTGGTGAATCAGAGTTTGAGCGGTATTGTAGTGCGAATTCGGCTTTGGGAACGCCGAGTATGTGTAGCTCTACTGGACCGTTTCAGGATTCCGAATTTGAGAATTTTAGCTTGGGACCAAGTCTAGTTAAGCTCTCTTCTTTGGATATGTCACGATTAGGTGATCGAGGTATCCATTTCTTCGATGAGGGCGGCTCTTGTAATGGTAGAAGTAGTAGTGCGCCCGGGTTAAACACCGGGAATGTGAACATCGATATGTGTGGTGATTTGATGGATGGTGGAGCTACAATTGAAAAAGATAGTGGTATAGATAGAGAAGATGGAAGTTCCATAGATGATGATGAACATTCTGATGGTGATGACTCGCTTAGTGATTCAGGTGATCATTCTCGTAATTATGTTTCACGGAATTTACAGTTTCAAAAGGAGGCTAAAGATGAGAACGATAATCCATTTCTCATCAATTCTTCCACTGCCTTTGGTACAAATGATTGGGATGAGTTTGAGCTTGAAGCCACTGAACTTGTTGACACTCAATTTGACTTCAGCGGGTTTGAGAAGCGTGATAAAGGGTGTACTGAAAGTGAAGGGACATCCACAGATTTATTCTCTGTAGCTTTACAAAAGCTTCCAGATGTAGTTCAAGCAGAAAAAGGGGAAGAACATGAAAATGTAACTGTGAGCACTAGACATGCTCCAGATGTAGGTGACTTCAGTGCAAATATTGAAGATATTAGATCTAGAGATTTTGGTGACCTGAGCGCTGAAGTTAAAACCTTGGTGGTTCGTCAATCACTGGTAACAGATGAGCCTCTTCGGGGCAGTTGTCTTGGCAACAGTCAAACTGAAGATAGACCTGTAGTCATGAATAACCTTCAATCTTGTAGCGCTGATGATGTCCTAGATATTACACCAACTGAGTTAGGTATTGAAGATTCTTCAGGTGGGGTTTGCGACCTTGATGACGATGTTTCTTCTGGACTACTTCATGAATCATCTGAGGATGGAAAACAGTCAAATCCATTTGGGGAATGCACCTCAGAACCGTTGTTGGCATCTCAGAACTCTGATATGCCATCATCTAGAGATTCTCATCCTGTAACAAATGCCTCAAAAGTCACTTACACACAACCTAAGAAGGAGAACACTGAGCTAAATGACTTCTATGATGATTTTGTTCATGATATGGAAGAAATACTGCTCGACTCTGGTGAATCATCTGGGGTAAGGTTTTCTAAGAATGACAAGATGTTCCAACTACAGCTCTCTCTGCCTAACAGGGATGGGGGGCAAACTGCTACAACGTCTGGTCTAGATGATTCATCTCCAACAGTTTCCCAGCGATTTAGGATTGATAGGGTTGAAGTTGTCGGTGTAAAGCAAAAAAAAGGTGATGTTTCGCTGAGTGAAAGATTGGTTGGGGTGAAGGAATACACAGTGTATGTCATAAGGGTTTGGAGTGGGAAAGACAAGTGGGAAATTGAAAGAAGATATCGTGATTTTTATAGTCTCTACCGTCGTTTGACATCTTTATTTGCTGATCAAGGCTGGACGCTTCCTACACCTTGGACCTCTGTAGAAAGAGAATCCAGGAAAATATTTGGAACATCGCCCAATGCTGTTGCTGAAAGGACTGTCCTGATTCAAGATTGTTTAAATTCAGTTCTCCAGTCCCGTTTTTTTCCCACACTTCCAAATGCGTTACTTAGGTTTTTATCCCCTCAAGATGCATATGCTAATTCTTCGGGGTTGGATTCTATAGTATCTCCAACAGGCTCTGCTGCCATCGATGCTGCTACAACCAGTTCTTCGTATGGAAATACCATCTCGTTCATTGTTGATATTCGACCTCACAAATCAGTAAAGCAGTTGCTAGAGGCTCAGCATTACATTTGCGCTGGATGCCACAGATACTTTGATGATGGAGCCACTCTTGTGCGAGACTTTGTGAAAGCTCTTGGATGGGGTAAGCCTCGGCTTTGCGAATATACTGGTCATTTGTTTTGTTCTTCCTGCCATACAAATGACATGGCAGTACTGCCAGCAACAGTGTTACATCATTGGGATTTTAATCGTTATCCAGTTTCTCAATTGGCAAAATCATATCTAGACTCCATACACGAGCAGCCTATGCTTTGTGTCAGTGCGGTCAACCCTTTTTTGTCCTCAAAAGTCCCTGCACTCAACCATATTATGAGCATCCGGAAAAGAATAACCATTATGCTTCCATATGTACGCTGCCCATTCCAAAAGACACTCTACAAAGGACTCAGTTCTCGCAGATACCTTCTTGAGAGCTCTGAATTTTTTGCTTTGAGAGATCTAATTGATCTCTCCAAAGGGCCATTTGCAGCACTTCCTGCAATCGTGGAGACCGTTAGGAGGAAAATCCTGGAGCATATTACAGAACAGTGCCTTGTTTGTTGCGATGTGGGGGTTCCCTGTAATGCCCGACAAGCTTGTGACGACACATCCTCTTTAATATTTCCATTTCAGGAGAAAGACGAGGTTAGCAAATGCCGGTTATGCGGTTCAGTTTTCCACAAGAAATGCTTATCAAGACTCTCAAACTGCCATTGCGGAGCACAACTAAAGCCGAACAAGAACCCTGGAGAGCTGCAAGTATCGGAAAAGAAATCAGATTCTACATCTGTCTTGCCTCTAAGATTCCTCTCAAGTTTATTTGGAAAGACAAAACAAGACAAAGAAACCACTATTCTTATGGGTTCACTTCCAACAAACGATCTATAAATATGATTCTTTATGTATGTGTATAAACTTACCTTCTGTAATGTAGAGCTCGAAGCTTGTTTAAACATAGCTTCTTTTACCTTTTTCTTGTTGAAAGATAATAAAATACGGGTCTAGTGAAATTATTTTACTTC
CDS Sequence
- >AT3G48195.1 ATGATCAATGGAGAGGAGGAATCATCGAGAGTTGATTCGCCAGGTTCGTCGTTACATTACTCGTCTTGTGGTGAATCAGAGTTTGAGCGGTATTGTAGTGCGAATTCGGCTTTGGGAACGCCGAGTATGTGTAGCTCTACTGGACCGTTTCAGGATTCCGAATTTGAGAATTTTAGCTTGGGACCAAGTCTAGTTAAGCTCTCTTCTTTGGATATGTCACGATTAGGTGATCGAGGTATCCATTTCTTCGATGAGGGCGGCTCTTGTAATGGTAGAAGTAGTAGTGCGCCCGGGTTAAACACCGGGAATGTGAACATCGATATGTGTGGTGATTTGATGGATGGTGGAGCTACAATTGAAAAAGATAGTGGTATAGATAGAGAAGATGGAAGTTCCATAGATGATGATGAACATTCTGATGGTGATGACTCGCTTAGTGATTCAGGTGATCATTCTCGTAATTATGTTTCACGGAATTTACAGTTTCAAAAGGAGGCTAAAGATGAGAACGATAATCCATTTCTCATCAATTCTTCCACTGCCTTTGGTACAAATGATTGGGATGAGTTTGAGCTTGAAGCCACTGAACTTGTTGACACTCAATTTGACTTCAGCGGGTTTGAGAAGCGTGATAAAGGGTGTACTGAAAGTGAAGGGACATCCACAGATTTATTCTCTGTAGCTTTACAAAAGCTTCCAGATGTAGTTCAAGCAGAAAAAGGGGAAGAACATGAAAATGTAACTGTGAGCACTAGACATGCTCCAGATGTAGGTGACTTCAGTGCAAATATTGAAGATATTAGATCTAGAGATTTTGGTGACCTGAGCGCTGAAGTTAAAACCTTGGTGGTTCGTCAATCACTGGTAACAGATGAGCCTCTTCGGGGCAGTTGTCTTGGCAACAGTCAAACTGAAGATAGACCTGTAGTCATGAATAACCTTCAATCTTGTAGCGCTGATGATGTCCTAGATATTACACCAACTGAGTTAGGTATTGAAGATTCTTCAGGTGGGGTTTGCGACCTTGATGACGATGTTTCTTCTGGACTACTTCATGAATCATCTGAGGATGGAAAACAGTCAAATCCATTTGGGGAATGCACCTCAGAACCGTTGTTGGCATCTCAGAACTCTGATATGCCATCATCTAGAGATTCTCATCCTGTAACAAATGCCTCAAAAGTCACTTACACACAACCTAAGAAGGAGAACACTGAGCTAAATGACTTCTATGATGATTTTGTTCATGATATGGAAGAAATACTGCTCGACTCTGGTGAATCATCTGGGGTAAGGTTTTCTAAGAATGACAAGATGTTCCAACTACAGCTCTCTCTGCCTAACAGGGATGGGGGGCAAACTGCTACAACGTCTGGTCTAGATGATTCATCTCCAACAGTTTCCCAGCGATTTAGGATTGATAGGGTTGAAGTTGTCGGTGTAAAGCAAAAAAAAGGTGATGTTTCGCTGAGTGAAAGATTGGTTGGGGTGAAGGAATACACAGTGTATGTCATAAGGGTTTGGAGTGGGAAAGACAAGTGGGAAATTGAAAGAAGATATCGTGATTTTTATAGTCTCTACCGTCGTTTGACATCTTTATTTGCTGATCAAGGCTGGACGCTTCCTACACCTTGGACCTCTGTAGAAAGAGAATCCAGGAAAATATTTGGAACATCGCCCAATGCTGTTGCTGAAAGGACTGTCCTGATTCAAGATTGTTTAAATTCAGTTCTCCAGTCCCGTTTTTTTCCCACACTTCCAAATGCGTTACTTAGGTTTTTATCCCCTCAAGATGCATATGCTAATTCTTCGGGGTTGGATTCTATAGTATCTCCAACAGGCTCTGCTGCCATCGATGCTGCTACAACCAGTTCTTCGTATGGAAATACCATCTCGTTCATTGTTGATATTCGACCTCACAAATCAGTAAAGCAGTTGCTAGAGGCTCAGCATTACATTTGCGCTGGATGCCACAGATACTTTGATGATGGAGCCACTCTTGTGCGAGACTTTGTGAAAGCTCTTGGATGGGGTAAGCCTCGGCTTTGCGAATATACTGGTCATTTGTTTTGTTCTTCCTGCCATACAAATGACATGGCAGTACTGCCAGCAACAGTGTTACATCATTGGGATTTTAATCGTTATCCAGTTTCTCAATTGGCAAAATCATATCTAGACTCCATACACGAGCAGCCTATGCTTTGTGTCAGTGCGGTCAACCCTTTTTTGTCCTCAAAAGTCCCTGCACTCAACCATATTATGAGCATCCGGAAAAGAATAACCATTATGCTTCCATATGTACGCTGCCCATTCCAAAAGACACTCTACAAAGGACTCAGTTCTCGCAGATACCTTCTTGAGAGCTCTGAATTTTTTGCTTTGAGAGATCTAATTGATCTCTCCAAAGGGCCATTTGCAGCACTTCCTGCAATCGTGGAGACCGTTAGGAGGAAAATCCTGGAGCATATTACAGAACAGTGCCTTGTTTGTTGCGATGTGGGGGTTCCCTGTAATGCCCGACAAGCTTGTGACGACACATCCTCTTTAATATTTCCATTTCAGGAGAAAGACGAGGTTAGCAAATGCCGGTTATGCGGTTCAGTTTTCCACAAGAAATGCTTATCAAGACTCTCAAACTGCCATTGCGGAGCACAACTAAAGCCGAACAAGAACCCTGGAGAGCTGCAAGTATCGGAAAAGAAATCAGATTCTACATCTGTCTTGCCTCTAAGATTCCTCTCAAGTTTATTTGGAAAGACAAAACAAGACAAAGAAACCACTATTCTTATGGGTTCACTTCCAACAAACGATCTATAA
Protein Sequence
- >AT3G48195.1 MINGEEESSRVDSPGSSLHYSSCGESEFERYCSANSALGTPSMCSSTGPFQDSEFENFSLGPSLVKLSSLDMSRLGDRGIHFFDEGGSCNGRSSSAPGLNTGNVNIDMCGDLMDGGATIEKDSGIDREDGSSIDDDEHSDGDDSLSDSGDHSRNYVSRNLQFQKEAKDENDNPFLINSSTAFGTNDWDEFELEATELVDTQFDFSGFEKRDKGCTESEGTSTDLFSVALQKLPDVVQAEKGEEHENVTVSTRHAPDVGDFSANIEDIRSRDFGDLSAEVKTLVVRQSLVTDEPLRGSCLGNSQTEDRPVVMNNLQSCSADDVLDITPTELGIEDSSGGVCDLDDDVSSGLLHESSEDGKQSNPFGECTSEPLLASQNSDMPSSRDSHPVTNASKVTYTQPKKENTELNDFYDDFVHDMEEILLDSGESSGVRFSKNDKMFQLQLSLPNRDGGQTATTSGLDDSSPTVSQRFRIDRVEVVGVKQKKGDVSLSERLVGVKEYTVYVIRVWSGKDKWEIERRYRDFYSLYRRLTSLFADQGWTLPTPWTSVERESRKIFGTSPNAVAERTVLIQDCLNSVLQSRFFPTLPNALLRFLSPQDAYANSSGLDSIVSPTGSAAIDAATTSSSYGNTISFIVDIRPHKSVKQLLEAQHYICAGCHRYFDDGATLVRDFVKALGWGKPRLCEYTGHLFCSSCHTNDMAVLPATVLHHWDFNRYPVSQLAKSYLDSIHEQPMLCVSAVNPFLSSKVPALNHIMSIRKRITIMLPYVRCPFQKTLYKGLSSRRYLLESSEFFALRDLIDLSKGPFAALPAIVETVRRKILEHITEQCLVCCDVGVPCNARQACDDTSSLIFPFQEKDEVSKCRLCGSVFHKKCLSRLSNCHCGAQLKPNKNPGELQVSEKKSDSTSVLPLRFLSSLFGKTKQDKETTILMGSLPTNDL