Gene Details:

• Gene ID: AT4G16520
• Gene Symbol: ATG8F
• Gene Name: autophagy 8f
• Description: Ubiquitin-like superfamily protein;(source:Araport11)
• TAIR Accession: locus:2130759
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G16520.1     AT4G16520.2     AT4G16520.3

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0006995  — involved in — cellular response to nitrogen starvation
• GO:0005515  — enables — protein binding
• GO:0005776  — located in — autophagosome
• GO:0090558  — acts upstream of or within — plant epidermis development
• GO:0010015  — acts upstream of or within — root morphogenesis
• GO:0019439  — acts upstream of or within — aromatic compound catabolic process
• GO:0044248  — acts upstream of or within — cellular catabolic process
• GO:0009826  — acts upstream of or within — unidimensional cell growth
• GO:1901565  — acts upstream of or within — organonitrogen compound catabolic process
• GO:0006520  — acts upstream of or within — amino acid metabolic process
• GO:0005737  — located in — cytoplasm

Function-related keywords:

• root

Literature:

• Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene.   DOI:  10.1104/pp.011024 ;  PMID:  12114572
• Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome.   DOI:  10.1104/pp.103.028241 ;  PMID:  14500793
• Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy.   DOI:  10.1105/tpc.104.025395 ;  PMID:  15494556
• Visualization of autophagy in Arabidopsis using the fluorescent dye monodansylcadaverine and a GFP-AtATG8e fusion protein.   DOI:  10.1111/j.1365-313X.2005.02396.x ;  PMID:  15860017
• Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways.   DOI:  10.1104/pp.105.060673 ;  PMID:  16040659
• Starvation-induced expression of autophagy-related genes in Arabidopsis.   DOI:  10.1042/BC20040516 ;  PMID:  16354162
• Exploiting the wild crucifer Thlaspi arvense to identify conserved and novel genes expressed during a plant's response to cold stress.   DOI:  10.1007/s11103-006-9080-4 ;  PMID:  16972165
• Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance.   DOI:  10.1186/1471-2164-8-450 ;  PMID:  18053238
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• An autophagy-associated Atg8 protein is involved in the responses of Arabidopsis seedlings to hormonal controls and abiotic stresses.   DOI:  10.1093/jxb/ern244 ;  PMID:  18836138
• ATI1, a newly identified atg8-interacting protein, binds two different Atg8 homologs.   DOI:  10.4161/psb.20030 ;  PMID:  22580699
• The deubiquitinating enzyme AMSH1 and the ESCRT-III subunit VPS2.1 are required for autophagic degradation in Arabidopsis.   DOI:  10.1105/tpc.113.113399 ;  PMID:  23800962
• A BAR-domain protein SH3P2, which binds to phosphatidylinositol 3-phosphate and ATG8, regulates autophagosome formation in Arabidopsis.   DOI:  10.1105/tpc.113.118307 ;  PMID:  24249832
• Arabidopsis ATG8-INTERACTING PROTEIN1 is involved in autophagy-dependent vesicular trafficking of plastid proteins to the vacuole.   DOI:  10.1105/tpc.114.129999 ;  PMID:  25281689
• Dicot-specific ATG8-interacting ATI3 proteins interact with conserved UBAC2 proteins and play critical roles in plant stress responses.   DOI:  10.1080/15548627.2017.1422856 ;  PMID:  29313416
• Overexpression of ATG8 in Arabidopsis Stimulates Autophagic Activity and Increases Nitrogen Remobilization Efficiency and Grain Filling.   DOI:  10.1093/pcp/pcy214 ;  PMID:  30407574
• ATG8-Binding UIM Proteins Define a New Class of Autophagy Adaptors and Receptors.   DOI:  10.1016/j.cell.2019.02.009 ;  PMID:  30955882
• Phytopathogen Effectors Use Multiple Mechanisms to Manipulate Plant Autophagy.   DOI:  10.1016/j.chom.2020.07.010 ;  PMID:  32810441
• Mechanistic insights into an atypical interaction between ATG8 and SH3P2 in Arabidopsis thaliana.   DOI:  10.1080/15548627.2021.1976965 ;  PMID:  34657568
• Genome-wide association studies of Arabidopsis dark-induced senescence reveals signatures of autophagy in metabolic reprogramming.   DOI:  10.1080/15548627.2021.2003041 ;  PMID:  34781818
• The phosphatidylinositol 3-phosphate effector FYVE3 regulates FYVE2-dependent autophagy in Arabidopsis thaliana.   DOI:  10.3389/fpls.2023.1160162 ;  PMID:  37008475

Sequence: