Gene Details:
- Gene ID: AT4G18520
- Gene Symbol: PDM1, SEL1
- Gene Name: SEEDLING LETHAL 1
- Description: Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Function-related keywords:
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genes encoding pentatricopeptide repeat (PPR) proteins are not conserved in location in plant genomes and may be subject to diversifying selection. DOI: 10.1186/1471-2164-8-130 ; PMID: 17521445
- PPR protein PDM1/SEL1 is involved in RNA editing and splicing of plastid genes in Arabidopsis thaliana. DOI: 10.1007/s11120-015-0171-4 ; PMID: 26123918
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
Sequence:
cDNA Sequence
- >AT4G18520.1 ATAAACTTTTAATTCTCTTTACCAAAATAAATAAAAAAGAGAACTTTATCTGATTTTTTTTCCGGCGGGAGATCTCTGTGTGAAGCTTCTTCTCTTTCTCCATCGCCGACAATGTTTTCGTTATCGTTAATCCAACCGCGTCTCCGGATTTCAGAGATTCCGGTGACTCAATCCTACAAATCTCCGACGATATGTTACAGTAGCGATTCAAGAACTAAGCGAGAGGAACAGAGACACGTGAGATTACCTGGGTTTCGATTAGTTTCTGGAAAGAGAGCATCTTTCGATTCGGGTTTTAGTGGTTTCAAAGGAGAGAATGTGAATCAGGATGATTCGTCTTCTTTCGATAGCGAAAGAGTTGATTATGCTCTGTTAGCGGAGTGGCTACAGTCTTCTAATGGGATGCGACTCATTAAAAGGATCCATGCGATGGCGTTGAAGTGTTTTGATGATCAAGTTATCTATTTTGGGAACAATTTGATTAGTTCTTGTGTTAGACTTGGTGATTTGGTTTATGCACGTAAAGTGTTCGACAGTATGCCTGAGAAAAATACTGTTACTTGGACTGCTATGATTGATGGGTATTTGAAGTATGGTCTTGAGGATGAGGCTTTTGCACTGTTTGAGGATTATGTGAAGCATGGAATACGTTTTACGAACGAGAGGATGTTTGTGTGTTTGTTGAATCTGTGTAGTAGGAGAGCAGAGTTTGAGTTAGGGAGACAAGTTCATGGTAATATGGTGAAAGTTGGAGTGGGGAATCTCATTGTGGAGAGTTCTCTTGTTTATTTTTATGCGCAATGCGGTGAATTGACAAGTGCGTTACGAGCTTTTGATATGATGGAGGAGAAAGATGTGATATCTTGGACTGCTGTTATATCGGCGTGTTCGAGAAAAGGGCATGGAATTAAAGCTATAGGCATGTTTATCGGAATGTTGAATCACTGGTTTTTGCCTAACGAGTTTACGGTGTGCAGTATTTTGAAGGCTTGTAGTGAGGAGAAAGCGTTAAGATTCGGAAGGCAAGTACACAGCTTGGTTGTTAAGAGGATGATAAAGACAGATGTTTTTGTGGGAACTTCGCTGATGGACATGTATGCTAAGTGTGGGGAGATTTCTGATTGCAGAAAAGTGTTTGATGGAATGAGTAATAGAAACACGGTCACATGGACTTCGATTATAGCTGCTCATGCTCGGGAAGGTTTTGGTGAGGAAGCTATCAGCCTCTTCCGGATAATGAAGAGGCGGCATTTGATTGCTAACAATTTGACAGTAGTAAGCATTCTTAGAGCGTGTGGATCTGTTGGAGCTTTATTGTTGGGGAAGGAACTTCATGCACAGATTATCAAGAATTCGATCGAAAAGAATGTCTATATAGGAAGTACTTTGGTGTGGCTGTATTGTAAATGCGGAGAATCTCGTGACGCTTTCAATGTTCTCCAGCAATTGCCATCTAGAGATGTGGTTTCATGGACCGCTATGATCTCTGGATGTTCGAGCTTAGGACATGAATCGGAAGCGCTAGACTTCTTGAAAGAGATGATTCAAGAAGGTGTAGAGCCAAACCCATTTACATACTCCTCGGCTTTAAAAGCTTGTGCGAATTCAGAATCTCTTCTTATCGGTAGATCAATCCATTCCATTGCAAAGAAGAATCATGCTCTATCAAATGTCTTTGTGGGAAGTGCTTTGATTCACATGTATGCAAAATGTGGATTTGTCTCGGAAGCTTTTCGGGTTTTTGACAGTATGCCTGAGAAGAACTTGGTTTCATGGAAGGCGATGATAATGGGTTATGCGAGGAATGGGTTTTGCAGGGAAGCATTGAAGCTAATGTATAGAATGGAGGCAGAGGGATTTGAAGTTGATGATTATATATTTGCAACAATTCTCTCTACTTGTGGAGATATTGAGCTCGATGAAGCTGTTGAATCTTCTGCAACTTGTTACTTGGAGACATCTTGATCTTTCTTCTTTAGAATCTCTTTTTTTTTCAAGTTCTTTCTTATATGATAAAGTTTATGAAAAAAAAGATGCGTTCCACAATAGCACCAAATGTACAAATTTCATGTCGAATATTTCTTCTTTGCAATTAGCCAATGCAAGAATTTTAATGATG
CDS Sequence
Protein Sequence