Gene Details:
- Gene ID: AT4G20060
- Gene Symbol: DSP1, EMB1895
- Gene Name: defective in snRNA processing 1, EMBRYO DEFECTIVE 1895
- Description: ARM repeat superfamily protein;(source:Araport11)
- TAIR Accession: locus:2119722
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0009555 — acts upstream of or within — pollen development
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005634 — located in — nucleus
- GO:0034472 — involved in — snRNA 3-end processing GO:0034472 29532 P other metabolic processes IBA none PANTHER:PTN000330295|TAIR:locus:2119722|FB:FBgn0036038 Communication:501741973 2023-06-07 AT4G20060 locus:2119722 AT4G20060 acts upstream of or within snRNA 3-end processing
- NONE — involved in — snRNA 3-end processing GO:0034472 29532 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000330295|TAIR:locus:2119722|FB:FBgn0036038 Communication:501741973 2023-06-07 AT4G20060 locus:2119722 AT4G20060 acts upstream of or within embryo development ending in seed dormancy GO:0009793 11994 P embryo development IMP analysis of visible trait NONE Publication:501772066|PMID:27780203 TAIR 2017-02-28 AT4G20060 locus:2119722 AT4G20060 acts upstream of or within embryo development ending in seed dormancy GO:0009793 11994 P multicellular organism development NAS Database entries that dont cite a paper (e.g. SwissProt records)
- GO:0032039 — part of — integrator complex
Function-related keywords:
Literature:
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- snRNA 3' End Processing by a CPSF73-Containing Complex Essential for Development in Arabidopsis. DOI: 10.1371/journal.pbio.1002571 ; PMID: 27780203
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
Sequence:
cDNA Sequence
- >AT4G20060.1 CGGCAGCTAATAATTTGAAGTCGGGTTTGGTCCTCGATTGAATTTTTATGTTCTGTAAATTCGTGAGAAGAGGCTTCTTCATCTGCGTATGGCGTGAAAATTCGTAATCTTTCGTTTGACAGAACTCTTCTATTTATCATCAATCTCCGGTTTCTTCTTCTTTGTAAGCCCTAAGAAGCCAAAAAGTGCTAACCATGGAGAAGGTTTCAGCAGCTTGCGCCATGGAATGGAGCATCAAGCTCGAGAAATCTCTTCGTTCTAAAAACTCAGTTAAAGCCGTTGAAGCTATCTTAGAGACTGGTGGGAAGCTTGAACAGTGGAGTAAAGAACCAGAATCTGCTATTGCTGTTTACAATTTATTTGGTTTGGTTCCTGAAGAAGATAAGCTCTTTTCAAATACTATCCTGTTGAGGCTTGTTGACGCGTTTTGTGTTGGGGATAAGCTTATTAAGCTTGCTGTTGTTCGGGTTTTTATGTCTATGTTTAAGCTAAGCCGAGGGAAGAACGTAAATGAATCAGCAAGTTGGTTTTTGTCAAAGGGTAGGGTGCATAACCACTTGGAATTGCTTACACGAGTGAAGAATGTGTATGATAAGGGTGATACTGAGTCTAAAGCTTTGGCTTTGATTCTGTTTGGTTGTTGGAGAGATTTTGCTAGCGAATTTGCTCCTGTACGGTATTTGGTTTTCAGCAGTATGGTTTCTCCTCATGATCTGGAGGGAAGATCAGCTCTGTTTGCTGCAGCTTGCTTTTGTGAAGTAGCAGATGACTTTGCATTGGTTGTTCTGGGGATGTTAAACGACATGGTGAAGTTCCCAGACATAACGCCAAAGACCAGGTTAGCTGCTGTGCGAGTTTTTGCAAAAATGGGATGCTCGCATACAATTGCTAATAGAGCATTCAAGATTTGTATGAAGCTAATGCTGGACTCCCCAAAAGAGGACAATTTGGTTCCATTCCTGGTTTCCTTGACTAAGCTTGCTTCAAGATCAACTCATCTTGCTTCTGAACTGGCAGAGGTTATCATACCCTTTCTGGGTGAAGATAAAACTTCTCATGCTCGAGCTGCAGTATTGAGATGTCTCCACTTTCTCATAGAAAGAGGGATGTGCTTCTCTCTTGCCCATGAAAGAGATATTGCAAGTGTTTCAAGCTTATTAAAGCAAGAAGAGCTCTCATCAGATATGCAAGTTAAAGCTCTTCAAATTTTTCAGAAGATAGTTGTCTACAAACTATGCATGACTGATGCATCTGAATTACTTCAGCTCATAGCTATTACTGAGAATGCATCTCATTCTCAGATCTTTTCAAGCAGTTGTTTAGCCATCAGTGTCTTGGTGAGTATATGGACAGAAATAGTTCGGACAGCGGAAAAAAGATCAATTGAGATATCTTCAACATCTCTTCCGATGCAGCTCGTTGTATTAATCATGGACAGGGTCGCCTTGCTGGGGCGATTATGTTCTGATCTTTTTCGAGCTGGCTATGCTGTAGTTAGTGAGGTTCAAGACCTCTTGAAGGTTCTCCACCTATTAGTAGGAAAACATTCTGAACTGAGACTGCTAGTTCTTGAAAAAGTCAGATTATTCTTAACGTATATTGTGAGCCTAAATGATGGCTTAAGAAAAGCAGATGGAGCTCATGAATTGCTATTTGGTGTTATCAATTATAAAGACAAAAGAGGGGTGGTCATGAGGTCAGAGTTTCTAGCATCAATACACAAGTTCCTGATAGTGTTCTTGGAAAATCTCGAGGGAGATGATAATCTTTTGTCTGAAATTTATGAAAAGGTGAAGCATATCACTGAGTTTGTAAGTTCATGCAGCTTCATTGATTTCCACACACAAATGATATTCACACTGCTACTACATTCCCCGATTCTTTGGGGATTCTCTGTGAATGATGATACAGGAAATTCAGGCGTATCACTTGTTGCTGATATAGTTAACTATGGAATCGTTTCTCTTGACTGTTCAAATCAGATTTTAATGGAGAGAAACTACTGGCCTGCTTACAGAGCTGGGGTTTACGCAGCACGTTTGGGTGCTTGGGTCACATCTGCTATGATTTTTGACCAGCTCAAAACCAACGTCCAGTCTGATATTAATTGTTGCTGGTTAAAGTCATTAACCTATTTATCCCATGCCGAGGGAAAATTCCAACTGCTTCTCACTCCAAGTGATAGTGTCAAGTTAGTCAATTGGCTGAAAAATAATGGTTATTTACCAGAACTCTCCAAAGATGCCTCTGGAGAGTTTGCACACTGTCTAGCTCTTCGTGAAGCTTATATGAATTTACAATCGTCTCTGGGAATGTTGGGAAATATTATAGCGTCAAGTGGAGTATTCTGTTTCCAAACGTGGTTCTTGGTTCTAAAGACTCGGGTATTGGAAACCGTGCTTGAACTCGTCGAATGCCTTGGGCTGCTTAACCAAGATTTACGCAACAAGAATCAGGTGGAAGAAATACTCTTGACTGGTTGCGATTCCCTGCAACAGCTTCCTCGGATTTCTATTCAGCTACAAAAGTTGGCAAAGGAATTTGATATGTTGGCGACGTGTTTCATAGACATAGACGATAGCAGTTCTAGCATTATCACAACAATTTCACTGAGCTGTTCAGTTCTGGCTTTTGCTGCTGGAATTGTTCTTTTCCTTCCAGGTTTTTCTTTTCAAGAAGCATTGGTTCCTTTCACTTCACAAAGCGGTCTGTGCTCGAGGCTTGTAGAAGATTTAGTTCGACGGCTGTGGAAAGTAGACCCCAATGTCTGCGAAAAGCTCAACATACTCGTTAACACAAACGAGTCGTTAAACTGTTTCCATTTGCAATCTAGGAATCAGGTTTTGAGAGTCTGTGGCAAAGTAAAGATGCTGCTCTCTATTTGCAGAGATGCTCTTTCATGCACTTATGGATTGCAGAATCAGTCAATGTCAATGCACAAAGAGGAGATTATGTCTGAGATTACGAAAAGTTGCAGGCATCTACTGTCACAAGCAATTATGAAATGGATGCAGATTCCTTTTGGTATTCCAAAGTATTTCTTCAACATAAGGCCTTGTGTTGGTGCCGAGCTATTTGCTCTTAGTTCAGAGAGTAGCAAACGTATTCCTGACACAGTTTCAGTGGAACAAGGGTTTCAACTGTCACTAGATCTTTGTCTTCAGTTGAAAAACATAAAACAACGGCAAGTCCCTGTTCGACTTAACAAACTGTATTGCCTTCTCTATACTAAACTAGCTTATCATTCTCCAACTCAACACGGTGAAAACAACAGAAACCAAATGTCTTATTCCCCTTGGAGAGATGAAGATCTGATTGAAATGAGTAACAAGCTGTTTCATCATGCTATAAAGTCTGGTAAGAAGCCGGACGTCTCAGGTCGATTTGATTGGGCCAAGAGTGGTGTTTCTACGGTTGTGCAGTTCGAACCAAACGAGAGAGGACAAGGGTTTTCAAGCTGCTTGTTAGACGTTTCGCGTTTCCCGGTTGGTTCATATCAAATAAAATGGCTAAGCTGTTGCGTTGATCAACATGGTTCTTACTGGAATCTTCTACCTCTCAATGGCAAACCTGTGTTTACGGTTAAGAAAGCGTCATGACTAGAATAAGTGTTGGTTTTGACATGGCGGAAGAGTAAAAAGATCTAAGGAGGATCTAGTTCGGGAGCAAGCAAGAAATGAGACAGAGATTGGCTTTAAGACTAATCTCGAAATATGCAGCTACACATAAGAGAGATGTTTGCTTCAACACTATTTAGGTGAACTAATTTTTATTGGTATGTTGTTATGTTATGTTAACTAGATTGTAGACTAAAATCCATGAAAATTAAAGCTTGAAAAGCTAAAGTCAATTCCATCTAACACTGATATGTGATAATTAGCTAATAAGTAATAATTAAAGCT
CDS Sequence
Protein Sequence