Gene Details:
- Gene ID: AT4G25940
- Gene Symbol: PICALM2b
- Gene Name:
- Description: ENTH/ANTH/VHS superfamily protein;(source:Araport11)
- TAIR Accession: locus:2120780
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0005546 — enables — phosphatidylinositol-4,5-bisphosphate binding
- GO:0072583 — involved in — clathrin-dependent endocytosis
- GO:0030136 — is active in — clathrin-coated vesicle
- GO:0005905 — is active in — clathrin-coated pit
- GO:0032050 — enables — clathrin heavy chain binding
- GO:0005634 — located in — nucleus
- GO:0005545 — enables — 1-phosphatidylinositol binding
- GO:0005829 — located in — cytosol
- GO:0006900 — involved in — vesicle budding from membrane
- GO:0000149 — enables — SNARE binding
Function-related keywords:
- leaf lamina base , vascular leaf , stamen , flower , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
Sequence:
cDNA Sequence
- >AT4G25940.1 GAGTAGCATTGTTGAAAAGTCTGTTATTGGTGTTCTGTTTGTTGTTAAGGCGACTAACAACAGAGCATATCAAAAACTTGGTCTTCGTCTTCTTCATCCTTATCTTCTCTTTTCTCCATCTCTCCGTCCTAACCAAATCATTTCACAATTCCGGTGATCGCCGGAATTATCAAGAAATTTATCCAGATTCCGATTTATCGCTAGATGGCAACGTTTAACAGCTTCCGTAAAGCTGTCGGAGCAATCAAAGATTCCACTACCGTAAGTATCGCCAAGGTCAACAGCGAATTCAAGGATTTGGATGTTGCGATCGTAAAGGCCACAAATCACGTAGAATCTGCTCCCAAAGAACGTCACATTCGTAGAATATTCTCGGCGACATCGGTAGTGCAACCACGAGCAGATGTTGCTTACTGCATTCACGCATTAGCCAAAAGATTGTCAAAAACTCGCAATTGGGTTGTTGCGATCAAGGTGTTAATAGTCATTCATAGAACACTAAGAGAAGGTGATCCAACATTTAGAGAAGAGCTTCTCAATTACTCACATAGAGGACATATACTTCGAATATCAAACTTCAAAGACGATACAAGTCCTCTTGCTTGGGATTGCTCTGCGTGGATTAGGACATACGCGCTTTTCCTCGAGGAGCGGCTTGAATGCTATCGGGTTTTGAAGTATGACATAGAAGCAGAACGTTTACCAAAAGGTTCAGGTGCATCTTCAAAGAACGTAGATTTCAATGCTTCTCAAACGTATAGAACAAGGATGCTCTCCGATGAAGAATTGCTAGAGCAGTTACCTGCTTTGCAACAGCTGCTTTATAGGCTTATTGGTTGTCAGCCTGAAGGATCAGCATATAGCAACTACCTAATCCAGTATGCTCTTGCATTGGTGCTTAAAGAAAGCTTCAAAATCTACTGTGCCATTAATGATGGAATCATTAATCTTGTAGACATGTTCTTTGAGATGTCAAGACATGATGCAGTTAAAGCTCTAAATATATATAAACGAGCTGGCCAACAGGCTGAAAATTTGGCTGACTTTTATGAATACTGCAAAGGTCTAGAGCTAGCGAGAAACTTTCAGTTCCCAACCTTAAGACAGCCTCCTCCTTCTTTCCTAGCAACAATGGAAGACTACATTAAAGAAGCGCCTCAAAGTGGTTCTGTACAGAAAAAGCTGGAGTATCAGGAAAAAGAGGAAGAAGAACAAGAAGAAGAAGAAGCAGAACACTCTGTCCAGCCTGAAGAACCTGCAGAAGCCGATAATCAAAAGGAAAACAGCGAAGGAGACCAGCCGCTTATCGAAGAAGAGGAAGAAGACCAAGAAAAAATAGAAGAGGAAGATGCTAAACCTTCTTTCCTGATAGACACTGATGATCTGCTGGGACTAAATGAGATCAACCCTAAAGCCGCAGAGATAGAGGACCGAAATGCATTGGCTCTTGCAATATATCCACCAGGTCATGAAGCTCCAGGACCATCAAACATTTTAAGTTTAATAGAAACCGGTGGATCCGGCTGGGAATTGGCACTGGTCACTCCTCAGAACAACAACAACAACAATAATCCTCGCCCTGCGCCTAACACCAAACTTGCAGGAGGATTTGACAATCTATTGCTTGACAGTCTGTACGAGGATGATTCAGCTAGGAGACAGATCCAGCTAACCAATGCGGGCTATGGACATGGTGGCATAGACACAACAGCAGCACCGCCAAACCCATTCCAAATGCAACAAGATCCTTTTGCAATGTCCAACAACATTGCTCCTCCCACTAATGTTCAAATGGCAATGCAACAACAACAGCAACAACAGATGACGATGATGCATCAGAGTCCCTACAATTACACTCATCCTCATGATTATCATCAAAATCATCATCATCATCAGTTCTCAGCCGGTCCTTCTCCTTCTAATCCTTTTGGAGACGCTTTCCTTGCCCTCCCACCTCCGCCAGGATCAGCTGGTCCGCAACAAAACAACCATCATCATATGCTCCTCTAGAGTTACAACATCTCAGATAATAATCTCTCTTTCTCTTGGTTACCTTTTTTTTTTGGTTTAGTTTGATTATATATATTCAGAGTGTTATTCTTTCATTCTTTCTACTAGACAACTCTACTCACTGATGATTTCTTAGCCATTTTTATCTTTCAGCACTTTTGATTGCCTTTACTTTTTACCCTGCAAATGAGTTAATTTAGGTTTTCAAAATAAGTAGTCTGAGTTGTGATTAAGAAAGATAAAACGGGTTTCTCTCATGTTTTATTTTCAAATAGTCGGAGATCTA
CDS Sequence
Protein Sequence