Gene Details:
- Gene ID: AT4G27340
- Gene Symbol: AtTRM5b, TRM5b
- Gene Name: tRNA methyltransferase 5b
- Description: Met-10+ like family protein;(source:Araport11)
- TAIR Accession: locus:2131744
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0002939 — involved in — tRNA N1-guanine methylation
- GO:0052906 — enables — tRNA (guanine(37)-N(1))-methyltransferase activity
- GO:0102522 — enables — tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity
- GO:0009019 — enables — tRNA (guanine-N1-)-methyltransferase activity
- GO:0009507 — located in — chloroplast
- GO:0005737 — is active in — cytoplasm
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes. DOI: 10.1016/j.cub.2005.01.008 ; PMID: 15668172
- Identification of tRNA nucleoside modification genes critical for stress response and development in rice and Arabidopsis. DOI: 10.1186/s12870-017-1206-0 ; PMID: 29268705
Sequence:
cDNA Sequence
- >AT4G27340.3 AGCAGAGTGATATGTTCGTTCTTATTGCCGATGAAATCTCTAATATGCTCCCTGAGTAATACCTTTGATGCACAAACGCGGGAAATGACCTTCATTGTCCCAACACCAAAACCCAAATCCATCAGGAAGCTGAGTGAATCAGAAAATGGTGTCAAAGCTTTCTCTTTTCCGAGCCAATTCACTTCCTTTTCCAGTCATCTCTTCCTACTCTGCTCGTTTTATCCTTAAACCCTATCCCAAACCTAAAACCCTTATCTTCTGTGTCTTCTCCAGTAATCTCTCCTCCACCACCTTTCCGTATGGCCCGTCTCTTCTGAAAGGAAAGAAGCCTGTGCTAGATGATATTAGATTAGCTTCAATTGGTCGAGACAGAGATGCCCATCGAGGCAAAATTGGAGAGTTTGATGAATCAATTGAGAAAGATGTTCTTTTGAATGAAGATGAATTTACTAGGGTTTTTGAGATTTCGGCGATTCGAGTCCCGGCGAAGGATTGTTTCGCGCTCGAGAATCGTCTCCGTGGTCATCTTCTTAATTGGCCTAGGATTCGGAACATTGCTAGGGTTCCTGGAGATGAGATTGAAGAAGATGTGGTGAAGCTGTTGGGCCGTGAGACTGATGAAGAAGAAGAAGATGAAGATAGTGTTGTGGATTCGGTTAACCGGAGAATAAGAGGGAAAGCAGAAGGGGATGGGGAGAGATTGAGTTCAGTGTTGCATAGAGATAAACTCGCCAGGACATTTAATTCAACTGGGTATCTCAAATTCAGAAACTTGGCCAAGATTTCTCGGCCAAAGAGGAAGAGGAAGACAGAGAGAACAAGGGAGGGGAAGGAAAAGGAAATAGCAAGCAGACGCAACGAAATGGCGGTGGTGGAAGTGGTGGAAACTCGAGGAGGAGAAGAGGATTTTGAGGGGTTATTGGGAGAAGGCTATGGTAGTAGAGGAAGATGGAGAGGTTCAACAAGATTGTTGCTTTTGGATGAGAAATATTCCGGTGAGGAAGTTCAAGACTTGCCTGAGGCTATCAAGGTTCTGTTTGCAGAAGCTAAAATGGCTGATGCAAGCTTAAGTTTCGAGCTAGTGAAATGCAGACTGACTTTGTTCTATGACTATTGGCCAATGATTGAGATATTGGAGGCTGTACTACCTAAGGGTATGATTGTGCCTTCGGCATTTGAGATGGTGGGGCATATTGCGCATCTGAACCTAAGAGATGAGCATCTACCATACAAAAGGCTCATAGCTAAGGTAGTCCTGGACAAGAATCAGCCAAAGATACAAACCGTTGTGAATAAGATTGATCCTATCCACAATGACTTCAGAACTATGCAGCTAGAGGTTTTAGCTGGAAACCATTCGCTGGTGACTCTAGTTGTTGAAAATGGACTGCGCTTTCATGTTGATTTAGCTAGAGTGTATGTAAATTCTTTCTCATTGAAATGCCAATTATAGTATGCATGCTTTTATTGAGTGCTTTGATGATGACCCAAATACCATTTACCATTTGAAATTAGCCCTTACCCTACTTAATTCGGTGATGAAAGTAGCTTTGTGTAAGATGTCTGATATCAGTTTTGAGTTTTCAGTCAGAGGAGAAATGTTGTCTACTTTTGACTTAGAAAACATGTTCTTACCAAATCTCGTATCATGTGATTTAGCGATATATCTGCTTATAAGTTGACGTTTTTGGCATTTTTTGCGTGTGCTAGATATTGGAATTCGAAACTTGGGACAGAAAGACAGAGGCTGCTACTCGGGTTCGACCAAAATGACGTTGTCTGTATGTTTGCTACTTAGAACTGATACATCATGAAAATTATTGCTATGCCCTCTATTGAACTCCCCATTTATAAATTAGCACCACTGATCTCCTCATTAAAAAGTGCATTGTCCCTCCTATTGGTGTTGAAATTTGCTGTTCTCCGTTGTATAAGAAGCATATGTAGCGGCCAGATAGATAATACATTGATTGTATTATTGTTATTGCTAGTCTGGAGTTCTCTTTTCTGTCTTGTTTCAAGTTTTGTCTATGTCTTGTTCTGTTT
- >AT4G27340.2 AGCAGAGTGATATGTTCGTTCTTATTGCCGATGAAATCTCTAATATGCTCCCTGAGTAATACCTTTGATGCACAAACGCGGGAAATGACCTTCATTGTCCCAACACCAAAACCCAAATCCATCAGGAAGCTGAGTGAATCAGAAAATGGTGTCAAAGCTTTCTCTTTTCCGAGCCAATTCACTTCCTTTTCCAGTCATCTCTTCCTACTCTGCTCGTTTTATCCTTAAACCCTATCCCAAACCTAAAACCCTTATCTTCTGTGTCTTCTCCAGTAATCTCTCCTCCACCACCTTTCCGTATGGCCCGTCTCTTCTGAAAGGAAAGAAGCCTGTGCTAGATGATATTAGATTAGCTTCAATTGGTCGAGACAGAGATGCCCATCGAGGCAAAATTGGAGAGTTTGATGAATCAATTGAGAAAGATGTTCTTTTGAATGAAGATGAATTTACTAGGGTTTTTGAGATTTCGGCGATTCGAGTCCCGGCGAAGGATTGTTTCGCGCTCGAGAATCGTCTCCGTGGTCATCTTCTTAATTGGCCTAGGATTCGGAACATTGCTAGGGTTCCTGGAGATGAGATTGAAGAAGATGTGGTGAAGCTGTTGGGCCGTGAGACTGATGAAGAAGAAGAAGATGAAGATAGTGTTGTGGATTCGGTTAACCGGAGAATAAGAGGGAAAGCAGAAGGGGATGGGGAGAGATTGAGTTCAGTGTTGCATAGAGATAAACTCGCCAGGACATTTAATTCAACTGGGTATCTCAAATTCAGAAACTTGGCCAAGATTTCTCGGCCAAAGAGGAAGAGGAAGACAGAGAGAACAAGGGAGGGGAAGGAAAAGGAAATAGCAAGCAGACGCAACGAAATGGCGGTGGTGGAAGTGGTGGAAACTCGAGGAGGAGAAGAGGATTTTGAGGGGTTATTGGGAGAAGGCTATGGTAGTAGAGGAAGATGGAGAGGTTCAACAAGATTGTTGCTTTTGGATGAGAAATATTCCGGTGAGGAAGTTCAAGACTTGCCTGAGGCTATCAAGGTTCTGTTTGCAGAAGCTAAAATGGCTGATGCAAGCTTAAGTTTCGAGCTAGTGAAATGCAGACTGACTTTGTTCTATGACTATTGGCCAATGATTGAGATATTGGAGGCTGTACTACCTAAGGGTATGATTGTGCCTTCGGCATTTGAGATGGTGGGGCATATTGCGCATCTGAACCTAAGAGATGAGCATCTACCATACAAAAGGCTCATAGCTAAGGTAGTCCTGGACAAGAATCAGCCAAAGATACAAACCGTTGTGAATAAGATTGATCCTATCCACAATGACTTCAGAACTATGCAGCTAGAGGTTTTAGCTGGAAACCATTCGCTGGTGACTCTAGTTGTTGAAAATGGACTGCGCTTTCATGTTGATTTAGCTAGAGTGTATGTAAATTCTTTCTCATTGAAATGCCAATTATAGTATGCATGCTTTTATTGAGTGCTTTGATGATGACCCAAATACCATTTACCATTTGAAATTAGCCCTTACCCTACTTAATTCGGTGATGAAAGTAGCTTTGTGTAAGATGTCTGATATCAGTTTTGAGTTTTCAGTCAGAGGAGAAATGTTGTCTACTTTTGACTTAGAAAACATGTTCTTACCAAATCTCGTATCATGTGATTTAGCGATATATCTGCTTATAAGTTGACGTTTTTGGCATTTTTTGCGTGTGCTAGATATTGGAATTCGAAACTTGGGACAGAAAGACAGAGGCTGCTACTCGGGTTCGACCAAAATGACGTTGTCTGTATGTTTGCTACTTAGAACTGATACATCATGAAAATTATTGCTATGCCCTCTATTGAACTCCCCATTTATAAATTAGCACCACTGATCTCCTCATTAAAAAGTGCATTGTCCCTCCTATTGGTGTTGAAATTTGCTGTTCTCCGTTGTATAAGAAGCATATGTAGCGGCCAGATAGATAATACATTGATTGTATTATTGTTATTGCTAGTCTGGAGTTCTCTTTTCTGTCTTGTTTCAAGTTTTGTCTATGTCTTGTTCTGTTT
- >AT4G27340.1 AGCAGAGTGATATGTTCGTTCTTATTGCCGATGAAATCTCTAATATGCTCCCTGAGTAATACCTTTGATGCACAAACGCGGGAAATGACCTTCATTGTCCCAACACCAAAACCCAAATCCATCAGGAAGCTGAGTGAATCAGAAAATGGTGTCAAAGCTTTCTCTTTTCCGAGCCAATTCACTTCCTTTTCCAGTCATCTCTTCCTACTCTGCTCGTTTTATCCTTAAACCCTATCCCAAACCTAAAACCCTTATCTTCTGTGTCTTCTCCAGTAATCTCTCCTCCACCACCTTTCCGTATGGCCCGTCTCTTCTGAAAGGAAAGAAGCCTGTGCTAGATGATATTAGATTAGCTTCAATTGGTCGAGACAGAGATGCCCATCGAGGCAAAATTGGAGAGTTTGATGAATCAATTGAGAAAGATGTTCTTTTGAATGAAGATGAATTTACTAGGGTTTTTGAGATTTCGGCGATTCGAGTCCCGGCGAAGGATTGTTTCGCGCTCGAGAATCGTCTCCGTGGTCATCTTCTTAATTGGCCTAGGATTCGGAACATTGCTAGGGTTCCTGGAGATGAGATTGAAGAAGATGTGGTGAAGCTGTTGGGCCGTGAGACTGATGAAGAAGAAGAAGATGAAGATAGTGTTGTGGATTCGGTTAACCGGAGAATAAGAGGGAAAGCAGAAGGGGATGGGGAGAGATTGAGTTCAGTGTTGCATAGAGATAAACTCGCCAGGACATTTAATTCAACTGGGTATCTCAAATTCAGAAACTTGGCCAAGATTTCTCGGCCAAAGAGGAAGAGGAAGACAGAGAGAACAAGGGAGGGGAAGGAAAAGGAAATAGCAAGCAGACGCAACGAAATGGCGGTGGTGGAAGTGGTGGAAACTCGAGGAGGAGAAGAGGATTTTGAGGGGTTATTGGGAGAAGGCTATGGTAGTAGAGGAAGATGGAGAGGTTCAACAAGATTGTTGCTTTTGGATGAGAAATATTCCGGTGAGGAAGTTCAAGACTTGCCTGAGGCTATCAAGGTTCTGTTTGCAGAAGCTAAAATGGCTGATGCAAGCTTAAGTTTCGAGCTAGTGAAATGCAGACTGACTTTGTTCTATGACTATTGGCCAATGATTGAGATATTGGAGGCTGTACTACCTAAGGGTATGATTGTGCCTTCGGCATTTGAGATGGTGGGGCATATTGCGCATCTGAACCTAAGAGATGAGCATCTACCATACAAAAGGCTCATAGCTAAGGTAGTCCTGGACAAGAATCAGCCAAAGATACAAACCGTTGTGAATAAGATTGATCCTATCCACAATGACTTCAGAACTATGCAGCTAGAGGTTTTAGCTGGAAACCATTCGCTGGTGACTCTAGTTGTTGAAAATGGACTGCGCTTTCATGTTGATTTAGCTAGAGTGTATGTAAATTCTTTCTCATTGAAATGCCAATTATAGTATGCATGCTTTTATTGAGTGCTTTGATGATGACCCAAATACCATTTACCATTTGAAATTAGCCCTTACCCTACTTAATTCGGTGATGAAAGTAGCTTTGTGTAAGATGTCTGATATCAGTTTTGAGTTTTCAGTCAGAGGAGAAATGTTGTCTACTTTTGACTTAGAAAACATGTTCTTACCAAATCTCGTATCATGTGATTTAGCGATATATCTGCTTATAAGTTGACGTTTTTGGCATTTTTTGCGTGTGCTAGATATTGGAATTCGAAACTTGGGACAGAAAGACAGAGGCTGCTACTCGGGTTCGACCAAAATGACGTTGTCTGTATGTTTGCTACTTAGAACTGATACATCATGAAAATTATTGCTATGCCCTCTATTGAACTCCCCATTTATAAATTAGCACCACTGATCTCCTCATTAAAAAGTGCATTGTCCCTCCTATTGGTGTTGAAATTTGCTGTTCTCCGTTGTATAAGAAGCATATGTAGCGGCCAGATAGATAATACATTGATTGTATTATTGTTATTGCTAGTCTGGAGTTCTCTTTTCTGTCTTGTTTCAAGTTTTGTCTATGTCTTGTTCTGTTT
CDS Sequence
Protein Sequence