Gene Details:

• Gene ID: AT4G29380
• Gene Symbol: AtVPS15, MTV11, VPS15
• Gene Name: Arabidopsis thaliana vacuolar protein sorting 15, modified transport to the vacuole 11, vacuolar protein sorting 15
• Description: protein kinase family protein / WD-40 repeat family protein;(source:Araport11)
• TAIR Accession: locus:2118234
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G29380.1     AT4G29380.2

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:0004674  — enables — protein serine/threonine kinase activity
• GO:0006623  — involved in — protein targeting to vacuole
• GO:0016236  — involved in — macroautophagy
• GO:0005515  — enables — protein binding
• GO:0005770  — is active in — late endosome
• GO:0005794  — located in — Golgi apparatus
• GO:0030242  — involved in — autophagy of peroxisome
• GO:0005737  — located in — cytoplasm
• GO:0009846  — acts upstream of or within — pollen germination
• GO:0045324  — involved in — late endosome to vacuole transport
• GO:0006468  — involved in — protein phosphorylation
• GO:0009846  — involved in — pollen germination
• GO:0010008  — located in — endosome membrane
• GO:0048015  — involved in — phosphatidylinositol-mediated signaling
• GO:0005524  — enables — ATP binding
• GO:0005942  — part of — phosphatidylinositol 3-kinase complex
• GO:0009555  — acts upstream of or within — pollen development
• GO:0005886  — located in — plasma membrane
• GO:0080008  — part of — Cul4-RING E3 ubiquitin ligase complex
• GO:0034271  — part of — phosphatidylinositol 3-kinase complex, class III, type I
• GO:0071561  — is active in — nucleus-vacuole junction
• GO:0034272  — part of — phosphatidylinositol 3-kinase complex, class III, type II

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  hypocotyl ,  collective leaf structure ,  pollen

Literature:

• Inositol phospholipid metabolism in Arabidopsis. Characterized and putative isoforms of inositol phospholipid kinase and phosphoinositide-specific phospholipase C.   DOI:  10.1104/pp.004770 ;  PMID:  12226484
• Systematic trans-genomic comparison of protein kinases between Arabidopsis and Saccharomyces cerevisiae.   DOI:  10.1104/pp.103.021485 ;  PMID:  12913170
• Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote.   DOI:  10.1074/jbc.M307321200 ;  PMID:  12912986
• Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases.   DOI:  10.1105/tpc.107.055418 ;  PMID:  18223036
• Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes.   DOI:  10.1105/tpc.108.058891 ;  PMID:  18552200
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• Arabidopsis AtVPS15 is essential for pollen development and germination through modulating phosphatidylinositol 3-phosphate formation.   DOI:  10.1007/s11103-011-9806-9 ;  PMID:  21833541
• Arabidopsis AtVPS15 plays essential roles in pollen germination possibly by interacting with AtVPS34.   DOI:  10.1016/j.jgg.2012.01.002 ;  PMID:  22361507
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• The Arabidopsis USL1 controls multiple aspects of development by affecting late endosome morphology.   DOI:  10.1111/nph.15249 ;  PMID:  29897620
• The Vacuolar Protein Sorting-38 Subunit of the Arabidopsis Phosphatidylinositol-3-Kinase Complex Plays Critical Roles in Autophagy, Endosome Sorting, and Gravitropism.   DOI:  10.3389/fpls.2018.00781 ;  PMID:  29967628
• and microtubule-associated compartments in the plant vacuolar trafficking pathway.   DOI:  10.1073/pnas.1919820117 ;  PMID:  32321832
• AUTOPHAGY-RELATED14 and Its Associated Phosphatidylinositol 3-Kinase Complex Promote Autophagy in Arabidopsis.   DOI:  10.1105/tpc.20.00285 ;  PMID:  33004618
• Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote.   DOI:  10.1074/jbc.M307321200 ;  PMID:  12912986
• Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases.   DOI:  10.1105/tpc.107.055418 ;  PMID:  18223036
• Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes.   DOI:  10.1105/tpc.108.058891 ;  PMID:  18552200

Sequence: