Gene Details:
- Gene ID: AT4G30840
- Gene Symbol: NUP43
- Gene Name:
- Description: Transducin/WD40 repeat-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2126689
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0005635 — located in — nuclear envelope
- GO:0031080 — part of — nuclear pore outer ring
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0016070 — acts upstream of or within — RNA metabolic process
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Genome-wide identification of potential plant E2F target genes. DOI: 10.1104/pp.105.066290 ; PMID: 16126853
- The Arabidopsis SUPPRESSOR OF AUXIN RESISTANCE proteins are nucleoporins with an important role in hormone signaling and development. DOI: 10.1105/tpc.106.041566 ; PMID: 16751346
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. DOI: 10.1101/gad.1476406 ; PMID: 17182867
- Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte. DOI: 10.1186/gb-2007-8-10-r204 ; PMID: 17915010
- Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. DOI: 10.1105/tpc.110.079947 ; PMID: 21189294
- and BKK1-mediated cell-death control. DOI: 10.1111/tpj.13125 ; PMID: 26775605
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
Sequence:
cDNA Sequence
- >AT4G30840.1 CTAATTTTTCCCACCATTGTTCTCGTTTAGCTCGGCTAAAACCCTAGAAAACCTCTGGAGCTATGGAGATGATGCAGGATTCGTTCCAAGTCCATAGGATTCCACAATCGAAGTATGTCGATGGAGTTAGATGGCTTCCACAAGCTTCTGCTTTGAATCGTTTCTTCGCAACAGCGTCCTATGACGCGGATTGTGATTCTTCATCAATCGAGATCCAATCGCTCGACCCAAACCCTAGAGGGAATCACAACACGAACCCGTTAATCGAGTCGTTATCTTCATGGACTTCACCTTCTCGCGTTTCGTCTCTAGAAGTCGCGGGAAACGGCGGTGGTGGCGGTTCATTCAAACCAATGGTTTCAGCAGCTACGTCTTCTGGTTCTCTTCACGTTCTGATGATTGATTTGGTGGAAGGAGCTGCGATTGAAGAGTTTTACGCGGCGGAAGGGGAGAGGTTTCATGTGGGACGCGTGGAAGGTGTGGATTGGAGAGAGGGAGGAGAATGTGTTACTGTTGGTGAAGATGGGAGAGTGAATGTAGTGAAGATTGTGAATGGTGAAGGTTTAAGGTATAGAAAGGTCTTTGATGGGAATGGATTGGTGGCTTATAGAGCTGTGAAATGGGCTTCTCCGACTGAGTTTGTTACTGGAGGATATGGTTTTGGTTTGCAATTGTGGGATCAGAGGAAGTCTGGTGAAGCTGTTTCACAACTCAAAGGGAACTGGTTTCAAGGCAAAACTTCTGCAATTGTCCACTCCATTGACATTCATCCATCTCGGAAGCACACTTGCATTGCAGGAGGTTCTTCAGGTACTGTATTTGCTTGGGATCTTCGGTGGCCACAGCAACCCATTGTTCTTTCTGGGGTTGGAGCAAGTGAGAATATAAACAATCCTCTGTCTGAAAGTGAGGTATGGGAAGTTCAGTATGACTCATACACAAAATCCAACGTCTCATCCTCAAGGATTCTCCCTGTTATGACCTGCTCTGAAGATGGAATCCTTGGTATCATAGAACAAGGGGAAGAACCAATCGAGCTTCTGGCTGAACCTTGTGCCATTAACAGTTTTGACATCGACAGGCAAAATCCACAGGATGTGATATGTAGCTTGGAGTGGGAATCAATAGCAGTTTTCTCAAGGCCTTAGTATAATATGGAACTGTGCACGGTATGCTATGTTTTCTTCTGCGAGCTACAACGAAGAAATTGAGGAAGGTAGTGATAGATGATGAGAGACAAGTTTAAGGAAGAGGGTGTGGAATGTGTTTATAAGTTTCATTATAACAAGATCTTAAAATACAGTCTGCACAAACAGAGTTTTGTATTCATCTTAAAGTTAGTGTGATCTTGAAGATTTGCAATCCTGGCTTGAATTGTACTTCTGAATCTCTGTCGCTGTATAAGTAGTGTGTGTATACCGACACCAAGTTAAACCTCAAACCCAACTATGACACGTGGCGAAAAAGAAGTCGGCCACGGTAGGTCCCACCGGAGCTAATACTTGGC
CDS Sequence
Protein Sequence