Gene Details:
- Gene ID: AT5G07840
- Gene Symbol: PIA1
- Gene Name: phytochrome interacting ankyrin-repeat protein 1
- Description: Ankyrin repeat family protein;(source:Araport11)
- Description: Derives_from AT5G07840;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Literature:
- Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes. DOI: 10.1186/1741-7007-5-32 ; PMID: 17663791
- Conserved upstream open reading frames in higher plants. DOI: 10.1186/1471-2164-9-361 ; PMID: 18667093
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of novel proteins involved in plant cell-wall synthesis based on protein-protein interaction data. DOI: 10.1021/pr100249c ; PMID: 20687615
- BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome. DOI: 10.1093/bioinformatics/bts303 ; PMID: 22618534
Sequence:
cDNA Sequence
- >AT5G07840.1 TTCTTCTTCTTCTTCTTCTTCTTCATCTGGAAATCGATATACGATTCTCACTCTCTACCCGCGAAAAAACACTAATTGATTCATATCCTCCGTCAAGGATAAATCTGTGTTTGATTCACCATATCTCTTTCTTCTCCCTCCGCGCTAAGCTACGACGCCTACAGATCTGGCTGGTAAAAATCACGCAGATAGAGACTCTGGCCCGATGCTCTCTTTACCCATTGATCCAGGCTTTTTCTGATTTCTCTTTGTTCCTAGAAACCATTAAGCTCCTACCTCTTTCTAGTTGATGCTCGTGTTCTCTTCACTGTCTATGACTCCAGTTGTGATCCCTCAAAATCTCCGTGTCTTTGGCCCTGGTTTGAATCCCTCTTTCCCTTACTGCATTGCTAATCACTTCCCTTGATTGAGTTGCTCCATTCCAACTGAATCATCTCAATCTGCCTCTCCCATAAGTTCTTATTCTGAGTGATATTGGTTGATGATTTCTACCCACAAGTAGTGTTCCTGCTTTAGACATTCTTGTATAAGATTGTAACCAAAATTATGTAAATCTGAGTCACTCCTAGAATCTCCTTGTCTAGTAAGTTTCCCTTAGGAAATATCCTTTGAGTCTTTCATCTGTGAATTCTAGTCAGTTCTGGTTTATCTGCAAGATGCTCCAAGAGCAGCCGGTTGCGTTGTCCTTTCGGCCTAACTCATTTAGGCGCCGGTCCATGGAAACGGGTGTTGACAGAGATGACAGGGGGTGGACTCAGCTTCACATCAAAGCTCGTGAAGGCGATCTCAAAGCTGTTAAAGAGCTCCTTGACCAAGGAGCAGACGTGAACGCTCTAGCTTGTGGACCTAAATCAAAAGGAATGACTCCTCTTCACCTTGCTGCCAAAGGAGGTCACATCGAAGTTATGGACTTGCTTCTTGAACGTGGAGCCAACATGGAAGCTAGAACCTCTGGTGCTTGTGGCTGGACTCCTCTCCATGCTGCAGCTAAAGAACGGAAAAGAGAAGCTGTCAAGTTTCTTGTGGGGAACGGTGCTTTCTTACCTGATGATATAACCGACAGTAGGTTCAACCCGCCGGTTCAGTACTGTCACGGCTTGGAATGGGCTTATGAAGAGAGGAAGAAACTCAGTGAAGATACTTCTTTATCTTGTGGAGACACTTCTTGCAGTTCTGCGAATTGATTCTTGTCTTTTGTTATCTTTCTTGCAATGGCTCATAAGTCGAAGAGACACAAAACCAAAGGTTTGTAATCATGTTGTATTGAAATATGAAATGATACATTTATCACC
CDS Sequence
Protein Sequence