Gene Details:

• Gene ID: AT5G08050
• Gene Symbol: RIQ1
• Gene Name:
• Description: wiskott-aldrich syndrome family protein, putative (DUF1118);(source:Araport11)
• TAIR Accession: locus:2142848
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G08050.1

Gene Ontology:

• GO:0009579  — located in — thylakoid
• GO:0009507  — located in — chloroplast
• GO:0003674  — enables — molecular_function
• GO:0009534  — located in — chloroplast thylakoid
• GO:0010196  — acts upstream of or within — nonphotochemical quenching
• GO:0009535  — located in — chloroplast thylakoid membrane
• GO:0045893  — acts upstream of or within — positive regulation of DNA-templated transcription
• GO:0009515  — located in — granal stacked thylakoid
• GO:0009658  — acts upstream of or within — chloroplast organization
• GO:0090391  — acts upstream of or within — granum assembly
• GO:0010027  — acts upstream of or within — thylakoid membrane organization
• GO:0005886  — located in — plasma membrane

Germplasm Phenotype:

• SALK_048774  — Reduced NPQ, affected organization of light-harvesting complex II and an enhanced grana stacking.

Literature:

• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy.   DOI:  10.1074/jbc.M406763200 ;  PMID:  15322131
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana.   DOI:  10.1073/pnas.0911635107 ;  PMID:  20351290
• Plastids are major regulators of light signaling in Arabidopsis.   DOI:  10.1104/pp.112.193599 ;  PMID:  22383539
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• Grana-Localized Proteins, RIQ1 and RIQ2, Affect the Organization of Light-Harvesting Complex II and Grana Stacking in Arabidopsis.   DOI:  10.1105/tpc.16.00296 ;  PMID:  27600538
• Comparative proteomics of thylakoids from Arabidopsis grown in laboratory and field conditions.   DOI:  10.1002/pld3.355 ;  PMID:  34712896
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy.   DOI:  10.1074/jbc.M406763200 ;  PMID:  15322131
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119

Sequence: