Gene Details:
- Gene ID: AT5G08720
- Gene Symbol: HCF145, HCF145, PPP1
- Gene Name: HIGH CHLOROPHYLL FLUORESCENCE 145, PIN2 PROMOTER BINDING PROTEIN 1
- Description: polyketide cyclase/dehydrase/lipid transporter;(source:Araport11)
- TAIR Accession: locus:504956340
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0042644 — located in — chloroplast nucleoid
- NONE — enables — mRNA 5-UTR binding GO:0048027 14101 F RNA binding IPI Co-immunoprecipitation AGI_LocusCode:ATCG00350 Publication:501765974|PMID:26307378 TAIR 2016-01-14 AT5G08720 locus:504956340 AT5G08720 located in mitochondrion GO:0005739 486 C mitochondrion HDA none NONE Publication:501711651|PMID:14671022 hmillar 2021-04-15 AT5G08720 locus:504956340 AT5G08720 located in chloroplast nucleoid GO:0042644 14200 C chloroplast IDA localization of GFP/YFP fusion protein Publication:501765974|PMID:26307378 TAIR 2015-10-23 AT5G08720 locus:504956340 AT5G08720 involved in regulation of photosynthesis, light reaction GO:0042548 13570 P other cellular processes IMP analysis of physiological response Publication:501765974|PMID:26307378 TAIR 2021-04-30 AT5G08720 locus:504956340 AT5G08720 enables protein binding GO:0005515 3877 F protein binding IPI none UniProtKB:Q7G8V2 Publication:501727302|PMID:18642946 2023-05-23 AT5G08720 locus:504956340 AT5G08720 involved in regulation of photosynthesis, light reaction GO:0042548 13570 P photosynthesis IMP analysis of physiological response Publication:501765974|PMID:26307378 TAIR 2021-04-30 AT5G08720 locus:504956340 AT5G08720 acts upstream of or within polycistronic mRNA processing GO:0031426 21034 P other metabolic processes IMP biochemical/chemical analysis NONE Publication:501765974|PMID:26307378 TAIR 2015-10-23 AT5G08720 locus:504956340 AT5G08720 located in chloroplast GO:0009507 175 C chloroplast IDA localization of GFP/YFP fusion protein Publication:501765974|PMID:26307378 TAIR 2015-10-23 AT5G08720 gene:504954188 AT5G08720.1 located in chloroplast GO:0009507 175 C chloroplast ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G08720 locus:504956340 AT5G08720 acts upstream of or within chloroplast mRNA processing GO:0010239 19804 P nucleobase-containing compound metabolic process IMP analysis of another genes protein levels
- GO:0042548 — involved in — regulation of photosynthesis, light reaction
- GO:0031426 — acts upstream of or within — polycistronic mRNA processing
- GO:0010239 — acts upstream of or within — chloroplast mRNA processing
Literature:
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Evolution of Arabidopsis microRNA families through duplication events. DOI: 10.1101/gr.4680506 ; PMID: 16520461
- PPP1, a plant-specific regulator of transcription controls Arabidopsis development and PIN expression. DOI: 10.1038/srep32196 ; PMID: 27553690
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
Sequence:
cDNA Sequence
- >AT5G08720.1 CAGAGGAACAATAAAGTTTAAATCATGGTTTCGAATATAATGTCTATTGAAGAACAAAAGGTGAATTTCAACCATACATCAAATATATAAAATAAGAAAAAATCCGGTGGCTGAGAATATTTAACGGTAATGTAACACTCTGCAACAGTATCTTCTTCCTCTACACTGACACATTTCGTCGAACACCTTTCGCTAATGTCAGTGAGCAAGTTTCCACATCTCTCTCATGGCGTTCACACTATCAATTTCCTCAATGAACCAGTGTTTTTAAGTGTGTTGCTCCCATCTCCCTCTCGGATTCGAGTATTCTCGTCCATTTCCACCTCCGGGATCGGCGGCGGGGTCGCCAAGTGCCATGGAACGAGACATAGCGGCGCCGGTGGTAGAGGTGATAACGGGTTGAGGAGAGATAGTGGATTAGGTTTCGACGAGAGAGGAGAGAGAAAAGTGCGTTGTGAGGTTGATGTGATCTCGTGGAGAGAACGGAGGATAAGAGGCGAAATCTGGGTCGATTCTGATTCTCAATCTGTTTGGAATGTTCTTACTGATTATGAACGACTTGCTGATTTCATACCCAATCTCGTTTGGAGTGGAAGAATTCCTTGTCCACATCCAGGACGTATATGGCTGGAGCAACGAGGCCTTCAAAGAGCCTTGTATTGGCATATTGAGGCTCGTGTTGTCCTTGATCTCCATGAGTGTCTAGATTCTCCAAATGGTCGTGAGCTTCACTTCTCTATGGTAGATGGTGATTTCAAAAAGTTTGAGGGAAAGTGGTCTGTGAAATCTGGTATCAGGTCCGTAGGAACTGTCTTGTCATACGAAGTAAACGTAATCCCAAGATTTAACTTCCCTGCCATTTTCTTAGAGAGGATAATCAGATCAGATCTTCCTGTAAATCTCCGGGCCGTAGCTCGCCAAGCTGAGAAAATTTATAAAGATTGCGGAAAGCCGTCAATAATAGAAGATTTGTTGGGTATAATATCTTCACAGCCAGCCCCTTCTAATGGTATTGAGTTCGATAGTCTTGCTACGGAGAGATCTGTTGCCTCCAGTGTTGGATCATTAGCTCATTCAAATGAATTGAACAACAATTGGGGAGTGTATGGAAAAGCCTGCAAGCTTGATAAACCTTGCACCGTGGATGAAGTTCATCTTCGTAGATTTGATGGTCTATTGGAAAATGGAGGTGTTCACCGATGCGCCGTTGCTAGTATAACAGTTAAAGCTCCTGTTTGTGAAGTTTGGAAAGTTCTAACGTCTTATGAGAGTCTTCCAGAGATAGTTCCAAATTTGGCAATCAGCAAGATTTTGTCACGCGATAACAATAAAGTCCGAATACTTCAGGAAGGATGCAAAGGCCTGCTTTACATGGTGCTTCATGCAAGAGCTGTTCTCGATTTGCATGAGATTCGTGAGCAGGAAATCAGATTTGAACAGGTTGAAGGAGACTTTGACTCGCTAGAGGGGAAATGGATTTTTGAACAACTAGGAAGTCACCACACACTTCTCAAGTATACCGTGGAGTCCAAAATGAGAAAAGATTCATTTCTTTCTGAAGCAATCATGGAAGAGGTTATATATGAAGATCTTCCGTCAAATTTATGCGCTATCCGGGATTACATTGAGAAAAGAGGAGAGAAATCTTCAGAGTCATGTAAACTGGAGACATGTCAAGTTTCAGAGGAAACATGTTCTTCATCTCGTGCCAAATCAGTTGAGACAGTTTACAATAATGATGATGGTTCAGACCAAACTAAGCAGAGACGGAGGATTCCTGGTCTACAAAGAGACATTGAAGTCTTGAAATCAGAAATTCTCAAGTTCATATCAGAACATGGACAAGAAGGATTCATGCCCATGAGGAAGCAGCTTCGGTTACATGGAAGAGTTGACATTGAAAAAGCCATTACAAGAATGGGTGGATTTAGGAGAATAGCTTTGATGATGAATCTTTCACTTGCTTATAAACACCGAAAACCGAAAGGATATTGGGACAATCTCGAAAACTTGCAAGAGGAGATAGGAAGATTTCAACAGAGTTGGGGAATGGATCCATCATTTATGCCGAGCAGAAAATCTTTCGAACGAGCAGGTCGTTATGACATTGCTCGGGCGCTCGAGAAATGGGGAGGATTACACGAAGTATCTCGTCTTTTAGCATTGAACGTGAGACATCCAAACAGGCAGCTAAATTCTCGTAAAGACAACGGTAACACGATACTGAGAACTGAATCTACTGAGGCCGATTTAAATTCAACGGTTAATAAGAATAATAAACCTTACGTCTCTCAAGATACCGAGAAATGGTTGTACAATCTTAAAGATCTTGATATCAATTGGGTTCAATATTGAAGCATTAATTATGTACATTTCACTATTTGTGTAGTCTTGTAACTCGCAAAGATAAACATGTATTTATGTAAATTGTAACATTGGATTGAAATTATCTGATCTCTTTTTAATGTTTCATCTGTTTTTAG
CDS Sequence
Protein Sequence