Gene Details:
- Gene ID: AT5G10350
- Gene Symbol: RRM
- Gene Name: RRM-containing protein
- Description: RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Germplasm Phenotype:
Function-related keywords:
Literature:
- An Arabidopsis Fip1 homolog interacts with RNA and provides conceptual links with a number of other polyadenylation factor subunits. DOI: 10.1074/jbc.M510964200 ; PMID: 16282318
- BIGPETALp, a bHLH transcription factor is involved in the control of Arabidopsis petal size. DOI: 10.1038/sj.emboj.7601270 ; PMID: 16902407
- Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling. DOI: 10.1186/1471-2164-9-220 ; PMID: 18479511
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm. DOI: 10.1007/s12192-012-0398-3 ; PMID: 23334891
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
Sequence:
cDNA Sequence
- >AT5G10350.6 CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT
- >AT5G10350.5 CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT
- >AT5G10350.2 CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT
- >AT5G10350.3 CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT
- >AT5G10350.4 CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT
- >AT5G10350.1 CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT
CDS Sequence
Protein Sequence