Gene Details:
- Gene ID: AT5G11040
- Gene Symbol: AtTRS120, TRAPPC9, TRS120, VAN4
- Gene Name: VASCULAR NETWORK DEFECTIVE 4
- Description: TRS120;(source:Araport11)
- TAIR Accession: locus:2184901
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0000911 — acts upstream of or within — cytokinesis by cell plate formation
- GO:0000919 — acts upstream of or within — cell plate assembly
- GO:0005802 — located in — trans-Golgi network
- GO:0003674 — enables — molecular_function
- GO:0005794 — located in — Golgi apparatus
- GO:0005886 — located in — plasma membrane
- GO:0005769 — located in — early endosome
- GO:0005802 — is active in — trans-Golgi network
Germplasm Phenotype:
- CS9990 — cytokinesis defective: bloated cells, cell wall stubs/gaps
- CS9991 — cytokinesis defective: bloated cells, cell wall stubs/gaps
- CS9992 — cytokinesis defective: bloated cells, cell wall stubs/gaps
- CS9993 — cytokinesis defective: bloated cells, cell wall stubs/gaps
Function-related keywords:
Literature:
- Tethering factors required for cytokinesis in Arabidopsis. DOI: 10.1104/pp.110.154286 ; PMID: 20713617
- A specific role for Arabidopsis TRAPPII in post-Golgi trafficking that is crucial for cytokinesis and cell polarity. DOI: 10.1111/j.1365-313X.2011.04681.x ; PMID: 21689172
- AtTRAPPC11/ROG2: A Role for TRAPPs in Maintenance of the Plant Trans-Golgi Network/Early Endosome Organization and Function. DOI: 10.1105/tpc.19.00110 ; PMID: 31175171
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- TRIPP Is a Plant-Specific Component of the Arabidopsis TRAPPII Membrane Trafficking Complex with Important Roles in Plant Development. DOI: 10.1105/tpc.20.00044 ; PMID: 32371545
Sequence:
cDNA Sequence
- >AT5G11040.1 TCTAACTAAGAATAGTTTAATACCTGTACCCAAACAGACCACGTTCTCTCTCTCAACACTTTCTCGTTTTCGTCTCCTTCAGATCCGGTGCACTCACGCTCACCGAAAGATCCTCACTCTCCTTCTCTGATCTCGCCATGGAACCTGACGTCAGTATCGAGACTTTGTCGATCATTCGGATCGCCGTCCTTCCGATCGGCACTATTCCGCCGACGCTTCTCCGGGACTACCACTCGATGCTGCTCCGTCATCACACGATCGCGCTCTCAGCTATTAGCTCTTTCTACACTGAACATCAGAAATCTCCATTCACGAATCAGCCGTGGGATTCCGGCTCTCTCCGGTTCAAATTTGTGCTTGGTGGTTCTCCTCCGAGTCCTTGGGAGGATTTTCAGTCTAATCGGAAGATGCTCGCCGTGATCGGCCTTTGCCACTGTCCCTCGTCCCCTGATCTTGATTCTGTCACTGAAAAATTCAATGTCGCTTGTAAGAGTTATTCCTCGGCTCTTGTCCGGCGCTGCTTCGCTTTCTCCCCTGGCGATTCGCAACTTGAAGATGGAGACAAGAAGGGTGAAAATTTGATTTTGTTTCCTCCATCTGACAAGCAAACTCAGGAGTTTCATTTACAAACAATGATGCAAGACATTGCCGCTTCGCTGTTAATGGAATTTGAGAAGTGGGTTCTTCAGGCAGAATCTGCTGGCACAATTTTGAAGACGCCTTTGGATTCCCAAGCTAGTCTCAACTCAGAGGAGGTTATTAAGGCCAAAAAGCGTAGGCTGGGACGTGCACAAAAAACTATAGGAGACTATTCCTTGTTGGCTGGTTCACCTGTTGATGCCAATGCTCATTATTCTACTGCTCTGGAACTGGCCAGATTGACTGGAGATTACTTCTGGTATGCCGGTGCCTTGGAAGGCAGTGTTTGTGCCTTACTGGTAGATCGGATGGGTCAACGTGATGTGGCTTTAGAAGATGAAGTTAGATATCGATACACTAATGTTATCTTGCACTACAGAAAGTCATTTATTCAAGAAATTGCTCAGAGAGTTTCGCCCCTAAGCTTTGAACTCGAAGCTACCCTTAAGCTGGCCAGATTCCTTTGCAGGAGGGAACTGGCTAAGGAAGTAGTAGAGCTATTAACAAATGCAGCTGATGGTGCAAAGTCTTTAATTGATGCCAGTGATAGGCTCATATTATATGTTGAAGTAGCGCGTTTATTTGGAGCCCTTGGTTATCAACGGAAAGCAGCCTTCTTCTGTAGGCAGGTCGCCCAATTGTATTTGCAGCAAGACAATCGATTGGCTGCTATCAGTGCCATGCAAGTTCTCTCTATGACAACTGATGCATACAGAATTCAAAGTAGGGCATCCATGTCAAAAGTGTCGGTTAACAATGAAACTGGGCGCCTACCTGACGCTGGGAAAATGCATCATCATTCCATTGTCTCCCTGTTCGAGTCCCATTGGAGCACTTTGCAGATGGTTGTGCTTAGGGAGATACTCCTCTCTGCTGTTCGTGCTGGAGATCCCTTAGCTGCATGGAGTGCTGCAGCTAGGCTTCTGAGGTGGCATTATCCTCTAATTACACCTTCAGGTCAAAATGGACTTGCTAATTCCCTTGCAAATTCAGCGGATAGATTACCTTCTGGAACTCGCTGTGCTGACCCTGCCTTGCCTTTTGTAAGGCTATTCTCTTTCCCACTCCATTCCTCCCAAGTGGACATCGTAAAACGCAATCCAGCAAGAGAAGATTGGTGGACAGGCTCTGCTCCTTCTGGGCCATTTATTTACACTCCTTTCAGCAAAGGAGATGCCAACGAAAGTAGCAAGCAGGAATTGATTTGGGTGGTCGGTGAACCAGTTCAGGTCTTAGTGGAGTTAGCAAATCCTTGTTGCTTCGATTTGCGGATTGATAGTATTTATCTCTCAGCTCACTCGAGTAACTTTGATGCGTTTCCTGTCAGTGTGGACATTCCCCCTAACTCTGCAAAAGTGATCACATTATCTGGTATTCCAACAGCTGTAGGACCAGTGACAATTCCAGGCTGCACAGTTCACTGCTTTGGTGTAATCACTGAACATGTGTTCAGGGATGTTGACAATCTGCTTCTTGGAGCAGCACAAGGACTTGTATTTTCTGACCCTTTCAGATCCTGCGGATCTGCAAAGCTACGACATGTATTTGTTCCTAACATATCAGTTGCTCCTCCATTGCCCCTCCTTGTGGCTAATGTTGTGGGTGGTGATGGTGCAATTATTCTGTATGAAGGTGAAATTCGGGAGGTGTGTATAAATTTTGCAAATGCTGGCACAGTTCCAATAGTACAGGCACATGTCTCGCTCTCTGGAAAGAATCAGGATGCTGTTATCTCGATCGCAGATGAAGCTTTACAGTCTGCTCTTCCCTTGAAACCTGGGGCACAAGTGACTCTGCCTGTGACTTTAAAAGCTTGGCATGTGGGTCCAACTGATTCTGACAATACTATGAGCAGTGGCAGGAATGCTGCGGGTAACACAGGAAGACCAAAAGACGGAACCAGTCCATCATTGCTTATTCACTACGCAGGGCCATTGTCTAACAATGGGGATTCCCAAGAAAAAGAATCTATCGTGCCACCGGGCAGACGGCTTGTTGTTCCCTTACAAATTTGTGTTTTGCAAGGTTTGTCGTTTGTGAAAGCTCGTTTGCTTTCCATGGAAATCCCTGCACATGTGAGTGACAACCTTCGGGATGAAGACATTGAAAGAGAGAGCAATGCAGACAGCCTTGTCAAGATCAATCCCTTTAGGGGAAGCTGGGGACTACGGTTTCTTGAACTTGAGTTATCTAACCCAACAGATGTTGTTTTTGAAATCAGCGTCTTCGTTCAGCTGGAAAACTCTGCCAAGGAAGATGATTCTTCACCAGTACAAGATTCTCCAGAGTATGAATACCCGAAAACAAGAATCGACCGGGACTATTCTGCTAGGGTACTGATTCCATTGGAGCATTTTAAGCTACCGGTTCTTGATGGTTCATTCTTCACAAAGGACCCTCCACCTGGTAGCCCTTCAAGTAGTAGAAATCCGAGCTTCTCAGAGAAGAACACGAAAGCTGAGATAAACACATTGATCAAGAATCTCATCTCTAAGATAAAAGTTCGGTGGCAATCAGGAAGGAACAGCTCAGGAGAACTGGACATCAAGGATGCAATTCAGACAGCTCTCCAGACGACTGTGATGGATGTTTTGCTCCCAGATCCGCTAACATTTGGTTTCAGACTGGTCAGAAACGGTCTGGAGAAGGATCCTGAGACAAAGGCTGAGTCCCCATTTTCAAAGGGATCTGTTCTGTCACATGAAGTCACTCCTATGGAGGTTCTGGTCCGCAATAACACTAGCGAAGCTATCAAGTTGAATCTAAGTGTTACTTGCAGAGATGTAGCTGGACAGAACTGCACTGAAGGAGCTGATGCCACTGTCCTCTGGGCTGGTGCTCTTAGTGGAATCTCAATGGAAGTAGCGCCGCTGCAAGAAGCAAGACACTGTTTCTCACTCTTCTTCCTTGTTCCAGGAGAGTACACGATGGTAGCAGCTGCTGTAATTGAAGACGCTAACAATGTACTCAGAGCACGAGCAGGAACTGCTTCTCCAAACGAACCCATCTTCTGTCGTGGACCGCCTTTTCATGTCTGTGTAGCTGGAGGTGCACTGTGATTCGTTAACCAAATCAGGTCTTGGCATTATAATTTATACTCTGTTTTTTGCTCTGTTAGTTGATTTCTCGAGAATCAATTATAAGTTCCGGGTTTAAGTATGGGTCTTTATAAATATCTCTATAATTGCTTGTGTGTTTGTCTCTGTATTTACCTTGGGTCATCTTATGACCACCATGCATAGACTATGCTTTTTTGGAATTTTACGGCCTCGGTTCTGAGACTACTTTTCTCAAAGTAAGTGTTTGTACTCTGCTCAGTGGGATCACTTTCAGTGATAAAAAGAATAAAACGATTATAGCATAATATTAGCAAAAATAAAACTATTTAACCATG
CDS Sequence
Protein Sequence