Gene Details:

• Gene ID: AT5G13010
• Gene Symbol: CUV, EMB3011, FEY, PINP1, PRP16
• Gene Name: CLUMSY VEIN, embryo defective 3011, FOREVER YOUNG, PSR1-Interacting Protein 1, homolog in yeast PRP16
• Description: RNA helicase family protein;(source:Araport11)
• TAIR Accession: locus:2182340
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G13010.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0009793  — acts upstream of or within — embryo development ending in seed dormancy
• GO:0008380  — acts upstream of or within — RNA splicing
• GO:0005634  — located in — nucleus
• GO:0035194  — involved in — regulatory ncRNA-mediated post-transcriptional gene silencing
• GO:0031053  — acts upstream of or within — primary miRNA processing
• GO:0033120  — involved in — positive regulation of RNA splicing
• GO:0000398  — involved in — mRNA splicing, via spliceosome
• GO:0048767  — acts upstream of or within — root hair elongation
• GO:0005622  — is active in — intracellular anatomical structure
• GO:0048364  — involved in — root development
• GO:0003724  — enables — RNA helicase activity
• GO:0010467  — involved in — gene expression
• GO:0031334  — acts upstream of or within — positive regulation of protein-containing complex assembly
• GO:0005681  — part of — spliceosomal complex
• GO:0004386  — enables — helicase activity
• GO:0010051  — acts upstream of or within — xylem and phloem pattern formation
• GO:0003723  — enables — RNA binding

Germplasm Phenotype:

• CS24359  — embryo defective; developmental arrest of mutant embryos occurs at globular stage.

Function-related keywords:

• root ,  plant sperm cell ,  guard cell

Literature:

• Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences.   DOI:  10.1093/nar/gkh845 ;  PMID:  15452276
• Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis.   DOI:  10.1073/pnas.0606536103 ;  PMID:  17008405
• Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte.   DOI:  10.1186/gb-2007-8-10-r204 ;  PMID:  17915010
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• Molecular foundations of reproductive lethality in Arabidopsis thaliana.   DOI:  10.1371/journal.pone.0028398 ;  PMID:  22164284
• Phytophthora effector targets a novel component of small RNA pathway in plants to promote infection.   DOI:  10.1073/pnas.1421475112 ;  PMID:  25902521
• Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis.   DOI:  10.1111/nph.16071 ;  PMID:  31334862

Sequence: