Gene Details:

• Gene ID: AT5G13270
• Gene Symbol: RARE1
• Gene Name: REQUIRED FOR ACCD RNA EDITING 1
• Description: Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)
• TAIR Accession: locus:2183886
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G13270.1

Gene Ontology:

• GO:0003729  — enables — mRNA binding
• GO:0008270  — enables — zinc ion binding
• GO:0009451  — acts upstream of or within — RNA modification
• GO:0005739  — located in — mitochondrion

Literature:

• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.   DOI:  10.1105/tpc.104.022236 ;  PMID:  15269332
• A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript.   DOI:  10.1261/rna.1533909 ;  PMID:  19395655
• Identification of novel proteins involved in plant cell-wall synthesis based on protein-protein interaction data.   DOI:  10.1021/pr100249c ;  PMID:  20687615
• Frequent chloroplast RNA editing in early-branching flowering plants: pilot studies on angiosperm-wide coexistence of editing sites and their nuclear specificity factors.   DOI:  10.1186/s12862-016-0589-0 ;  PMID:  26809609
• Cytidine deaminase motifs within the DYW domain of two pentatricopeptide repeat-containing proteins are required for site-specific chloroplast RNA editing.   DOI:  10.1074/jbc.M114.622084 ;  PMID:  25512379
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669
• The RanBP2 zinc finger domains of chloroplast RNA editing factor OZ1 are required for protein-protein interactions and conversion of C to U.   DOI:  10.1111/tpj.15569 ;  PMID:  34743362
• The DYW domain of RARE1 plays an indispensable role in regulating accD-C794 RNA editing in Arabidopsis thaliana.   DOI:  10.1016/j.plantsci.2023.111751 ;  PMID:  37263527

Sequence: