Gene Details:
- Gene ID: AT5G13370
- Gene Symbol: GH3.15
- Gene Name: Gretchen Hagen 3.15
- Description: Auxin-responsive GH3 family protein;(source:Araport11)
- TAIR Accession: locus:2181630
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0070406 — enables — glutamine binding
- GO:0005634 — located in — nucleus
- GO:0016881 — enables — acid-amino acid ligase activity
- GO:0005829 — located in — cytosol
- GO:0010249 — acts upstream of or within — auxin conjugate metabolic process
- GO:0005737 — is active in — cytoplasm
Germplasm Phenotype:
- SALK_079153 homozygous — slight reduction in root length as compared to wild type when grown for 18 days on 8 uM IBA.
Literature:
- Arabidopsis contains a large superfamily of acyl-activating enzymes. Phylogenetic and biochemical analysis reveals a new class of acyl-coenzyme a synthetases. DOI: 10.1104/pp.103.020552 ; PMID: 12805634
- DFL2, a new member of the Arabidopsis GH3 gene family, is involved in red light-specific hypocotyl elongation. DOI: 10.1093/pcp/pcg130 ; PMID: 14581632
- The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis. DOI: 10.1038/sj.emboj.7600337 ; PMID: 15282545
- The transcription factor ATAF2 represses the expression of pathogenesis-related genes in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02488.x ; PMID: 16115070
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequence:
cDNA Sequence
- >AT5G13370.1 ACCCAATAAAAGCTTTTATCTCCTCGTAGTACTCAAGTTGGATTTGTTTTCTCATCCTTTGTTAAATCCTCTTTATGAGAAAAGAACAAAATCAACTCATACATACACAATTGCCGGTACCCTAACATTTCGCCACACCACACCTTTTGTCTCCTTTATCCAATCTCTCCTCCATAGTTCTGAAGCTTCGAGAGAGAGGGGCCAGAAGGTCACCCAGAACAGAGGTTTTGCAGACAATAGAAAGCAGTAAGCAAGCATGTTACCAAAGTTCGATCCAACAAACCAAAAAGCTTGTCTGTCTCTTCTTGAGGATTTGACCACCAACGTAAAGCAGATTCAAGATTCCGTATTGGAAGCAATACTTTCACGTAATGCTCAAACTGAGTATCTTAGAGGTTTCCTCAACGGTCAAGTCGATAAGCAGAACTTCAAGAAAAACGTACCCGTTGTGACCTACGAAGATATTAGGTCTTATATCGACCGTATCGCTAATGGAGAGCCGTCTGATCTCATCTGTGATCGACCCATCAGTGTACTCTTGACCAGCTCGGGTACTTCAGGAGGAGTTCCAAAGTTGATTCCTTTGACAACAGAGGATTTGGAACAGAGGATTTCGTTTTCTTCTCTCTATGCACCTCTACTCTACAAGCACATCGATGGGCTTAGCGAAGGAAAATCTCTCATATTTTATTTTGTGACCCGAGAGAGCAAGACTGCCAATGGGTTGATGGTCAGGACTATGGTTACTAGTTTTTTGAAAAGCATTAAACAGACCAACTCATTTCTTTGGGATAGCTTACAGGTAAGCCCGCATGCGATTACTACTTGTGCAGACACTACTCAGAGCATGTACTGCCAATTGCTTTGTGGGCTTCTTGAAAGAGATAATGTTGCTCGCCTCGGTGCACCCTTTGCTTCATCATTCCTCAAAGTAATCAAGTTCTTGGAAGATCATTGGCCTGAGTTATGCTCAAACATAAGGACTGGCCGTCTCAGCGACTGGATCACAGACGCGACCTGTACTTCAGGGATCGGTAAGTTCCTCACTGCTCCAAATCCGGAACTAGCAAGCCTGATCGAGCAAGAATGCAGTAAAACATCATGGGAGGCAATATTGAAGAGACTTTGGCCAAAAGCAAAATGCATCGAATCCATCATTACAGGCACCATGGCACAGTACATTCCATTGCTGGAATTCTATAGTGGTGGTCTTCCTTTGACTTCATCGTTTTACGGCAGCTCTGAATGTTTCATGGGTGTCAACTTTAATCCTCTGTGTAAGCCTAGTGATGTGTCGTACACCATCATTCCATGTATGGGGTACTTCGAGTTCTTAGAGGTCGAGAAAGACCATCAAGAAGCTGGTCATGATCCCACAGAGAAACCTGTGGTTGTCGATCTTGTCGATGTTAAAATCGGCCATGATTATGAACCTGTTGTCACAACGTTTTCAGGTCTATATAGGTACCGTGTGGGGGACGTTTTAAGAGCGACTGGTTTCTACAACAATGCGCCACATTTTTGTTTCGTGGGAAGACAGAAAGTTGTTCTGAGCATCGACATGGACAAGACCTACGAAGACGACCTCCTCAAGGCAGTGACAAACGCAAAGCTCCTGCTTGAGCCACATGACCTGATGCTCATGGATTTCACTAGCCGTGTAGATTCGTCCTCGTTTCCAGGACACTATGTAATCTATTGGGAACTCGGGAGCAAAGTCAAGGACGCCAAGTTTGAACCTAACCGCGATGTTATGGAAGAATGCTGCTTCACTGTTGAGGAGTCTCTCGATGCTGTATACAGAAAAGGACGAAAGAATGATAAGAACATTGGACCACTTGAGATTAAGGTTGTTAAGCCTGGCGCTTTTGACGAGCTCATGAACTTCTTTCTGTCTAGAGGCTCTTCTGTGAGTCAGTACAAGACACCGAGGTCGGTGACGAATGAAGAAGCCTTGAAGATATTGGAGGCCAACGTTATTTCCGAGTTTCTTAGCCGGAAAATTCCATCGTGGGAGTTACATGAGTTACACTCCGGCAGATAAACCCGCAGTCATAATATCTGTGAGATTTGAGGGCAGGGGAGGAGAACAATGTTTACGACTTTTCTTAATTTAAACCTCTCTGTTTTTTTCCAGCCAACAAATGCTCTGTTCTTCAAGTTTTTATCTTTACAAATGCATCAGAGTTACCAAATGCATGTTTATAAGTCATTTCCCACATTGTAAATAACTTTACCAAATGCACCATAGTCGAGCCATTAATTTTAAATTTCGAAAAAAAC
CDS Sequence
Protein Sequence