Gene Details:
- Gene ID: AT5G18550
- Gene Symbol: AtC3H58
- Gene Name:
- Description: Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)
- TAIR Accession: locus:2182988
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0005634 — located in — nucleus
- GO:0009059 — acts upstream of or within — macromolecule biosynthetic process
- GO:0003729 — enables — mRNA binding
- GO:0043170 — acts upstream of or within — macromolecule metabolic process
Function-related keywords:
Literature:
- Isolation, sequence analysis, and expression studies of florally expressed cDNAs in Arabidopsis. DOI: 10.1023/B:PLAN.0000019063.18097.62 ; PMID: 15010618
- The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. DOI: 10.1105/tpc.105.035568 ; PMID: 16214899
- Calmodulin interacts with and regulates the RNA-binding activity of an Arabidopsis polyadenylation factor subunit. DOI: 10.1104/pp.105.070672 ; PMID: 16500995
- Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice. DOI: 10.1186/1471-2164-9-44 ; PMID: 18221561
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Sequence:
cDNA Sequence
- >AT5G18550.4 GAAAGATCAAAACTTCCCCATCCCTCTTCCAAAATCCATCCCCTCAAAAAAAATAAAAATACTTCCTTTCGAAATTTCGCTAAAAAAAAAAATCGAAGCCGAAAACAAATAGTAGAAGAAAGAAAAAAGTTTCAGCTTTAAGGAAAGAGATCAAGCGACTGAGAGTGGTGTGGAGACAGAACCAACCACGATCTGTGGTTTTTTTTTTTTTGTCCTTTTTTTTCTCCAATCTCAGAAATAAAAAAAGTTTCTTCCCGACACTCCCATTTGATCGGAGGGCTTCGACATTGGTGGGCTCTGTTTCGCCGCTCCGGCTAAAAGTTAGTGTAAAGCAAAAATGGAACGGTACGGTGGCGCCGGAGAAGATGAGTCACGGTCGGATCCATCACATGAATGGTCCGCTCAAGGAACCGAAACTGGTATCGAAGCTTCGATGTGGCGGTTAGGGTTGCGAGGTGGTGGAGGTGGAGGTGAAACGTTCCCGGAGCGACCCGATGAACCCGATTGTATCTATTATTTACGAACCGGTGTTTGCGGGTACGGGTCTCGATGTCGGTTCAATCACCCACGAAACCGTGCTCCGGTCTTGGGAGGTCTCAGAACAGAAGCTGGAGAGTTCCCTGAGAGAATGGGACAACCTGTTTGTCAGCATTTCATGCGAACAGGAACATGTAAATTTGGTGCTTCTTGTAAGTATCACCATCCTAGACAAGGAGGAGGAGGAGATTCTGTTACTCCTGTCTCCCTAAATTACATGGGATTCCCATTACGCCCGGGGGAGAAAGAATGCTCCTATTTCATGAGAACCGGTCAGTGTAAATTCGGTTCCACCTGTCGATATCACCATCCAGTCCCTCCTGGTGTACAAGCTCCATCTCAGCAGCAGCAACAACAGTTATCCGCTGGTCCAACTATGTATCCATCGCTTCAGTCTCAAACCGTTCCTTCATCGCAGCAATACGGAGTAGTTCTAGCAAGACCTCAGCTCTTACCAGGCTCATATGTTCAAAGCCCTTATGGTTACGGTCAAATGGTTCTTCCTCCTGGTATGGTTCCATACTCGGGCTGGAACCCTTACCAGGCTTCTGTAAGTGCGATGCCTTCCCCTGGGACTCAACCGTCAATGGGAACCAGCTCTGTTTATGGAATCACTCCGTTATCTCCCTCAGCGCCTGCTTATCAATCCGGTCCATCTTCTACCGGTGTTTCAAATAAGGAACAAACTTTTCCTCAGCGACCTGAACAACCTGAGTGTCAATACTTTATGAGAACCGGAGATTGTAAATTCGGAACCTCTTGCAGATTCCATCATCCTATGGAAGCAGCATCGCCAGAGGCAAGTACCCTCAGCCACATTGGCCTCCCACTTCGTCCCGGCGCAGTGCCATGCACTCACTTTGCGCAACACGGTATTTGCAAGTTTGGGCCTGCCTGCAAATTTGACCACTCCTTGGGCTCTTCTTCACTAAGCTACAGCCCATCCCCTTCTTCACTCACGGACATGCCCGTCGCACCTTACCCCTCCTCGCTCGGCACATTAGCTCCATCATCCTCATCTGACCAATGCACTGAGCTTATCTCTTCCAGCTCTATTGAACCTATAACAACAACAACTGGTGGCTCAGAAACTGTGGCTGCTGGAGTCTCTTCTATGACCAGTGATGTGAGCCATCCCGAGCCTGCTGAGACCAATAAAGGAACATAAAAAGGATATTTTTTGGGTGGAGAGACAACAACAGAAAGCAAAGCAGAGAGATAGACGAAAGGAGTTCTCTCTACTCTTCTATGTCATGTCTCTCCTCTTAGGTCTCTCTTACCATGTTCATATTATTCCTTCATACGGCCATCTCTCTGTCTTTTGTTCTTCTTTTTCTTTTTGGAAACGATGATTAATAAATGGCCTTATATATTCACAAAAATCCCCTGTTTATTTTTAAAACTTTATGGAATATGGGAATTAACTAATTAATAGTCCAATTTTTAT
- >AT5G18550.2 GAAAGATCAAAACTTCCCCATCCCTCTTCCAAAATCCATCCCCTCAAAAAAAATAAAAATACTTCCTTTCGAAATTTCGCTAAAAAAAAAAATCGAAGCCGAAAACAAATAGTAGAAGAAAGAAAAAAGTTTCAGCTTTAAGGAAAGAGATCAAGCGACTGAGAGTGGTGTGGAGACAGAACCAACCACGATCTGTGGTTTTTTTTTTTTTGTCCTTTTTTTTCTCCAATCTCAGAAATAAAAAAAGTTTCTTCCCGACACTCCCATTTGATCGGAGGGCTTCGACATTGGTGGGCTCTGTTTCGCCGCTCCGGCTAAAAGTTAGTGTAAAGCAAAAATGGAACGGTACGGTGGCGCCGGAGAAGATGAGTCACGGTCGGATCCATCACATGAATGGTCCGCTCAAGGAACCGAAACTGGTATCGAAGCTTCGATGTGGCGGTTAGGGTTGCGAGGTGGTGGAGGTGGAGGTGAAACGTTCCCGGAGCGACCCGATGAACCCGATTGTATCTATTATTTACGAACCGGTGTTTGCGGGTACGGGTCTCGATGTCGGTTCAATCACCCACGAAACCGTGCTCCGGTCTTGGGAGGTCTCAGAACAGAAGCTGGAGAGTTCCCTGAGAGAATGGGACAACCTGTTTGTCAGCATTTCATGCGAACAGGAACATGTAAATTTGGTGCTTCTTGTAAGTATCACCATCCTAGACAAGGAGGAGGAGGAGATTCTGTTACTCCTGTCTCCCTAAATTACATGGGATTCCCATTACGCCCGGGGGAGAAAGAATGCTCCTATTTCATGAGAACCGGTCAGTGTAAATTCGGTTCCACCTGTCGATATCACCATCCAGTCCCTCCTGGTGTACAAGCTCCATCTCAGCAGCAGCAACAACAGTTATCCGCTGGTCCAACTATGTATCCATCGCTTCAGTCTCAAACCGTTCCTTCATCGCAGCAATACGGAGTAGTTCTAGCAAGACCTCAGCTCTTACCAGGCTCATATGTTCAAAGCCCTTATGGTTACGGTCAAATGGTTCTTCCTCCTGGTATGGTTCCATACTCGGGCTGGAACCCTTACCAGGCTTCTGTAAGTGCGATGCCTTCCCCTGGGACTCAACCGTCAATGGGAACCAGCTCTGTTTATGGAATCACTCCGTTATCTCCCTCAGCGCCTGCTTATCAATCCGGTCCATCTTCTACCGGTGTTTCAAATAAGGAACAAACTTTTCCTCAGCGACCTGAACAACCTGAGTGTCAATACTTTATGAGAACCGGAGATTGTAAATTCGGAACCTCTTGCAGATTCCATCATCCTATGGAAGCAGCATCGCCAGAGGCAAGTACCCTCAGCCACATTGGCCTCCCACTTCGTCCCGGCGCAGTGCCATGCACTCACTTTGCGCAACACGGTATTTGCAAGTTTGGGCCTGCCTGCAAATTTGACCACTCCTTGGGCTCTTCTTCACTAAGCTACAGCCCATCCCCTTCTTCACTCACGGACATGCCCGTCGCACCTTACCCCTCCTCGCTCGGCACATTAGCTCCATCATCCTCATCTGACCAATGCACTGAGCTTATCTCTTCCAGCTCTATTGAACCTATAACAACAACAACTGGTGGCTCAGAAACTGTGGCTGCTGGAGTCTCTTCTATGACCAGTGATGTGAGCCATCCCGAGCCTGCTGAGACCAATAAAGGAACATAAAAAGGATATTTTTTGGGTGGAGAGACAACAACAGAAAGCAAAGCAGAGAGATAGACGAAAGGAGTTCTCTCTACTCTTCTATGTCATGTCTCTCCTCTTAGGTCTCTCTTACCATGTTCATATTATTCCTTCATACGGCCATCTCTCTGTCTTTTGTTCTTCTTTTTCTTTTTGGAAACGATGATTAATAAATGGCCTTATATATTCACAAAAATCCCCTGTTTATTTTTAAAACTTTATGGAATATGGGAATTAACTAATTAATAGTCCAATTTTTAT
- >AT5G18550.1 GAAAGATCAAAACTTCCCCATCCCTCTTCCAAAATCCATCCCCTCAAAAAAAATAAAAATACTTCCTTTCGAAATTTCGCTAAAAAAAAAAATCGAAGCCGAAAACAAATAGTAGAAGAAAGAAAAAAGTTTCAGCTTTAAGGAAAGAGATCAAGCGACTGAGAGTGGTGTGGAGACAGAACCAACCACGATCTGTGGTTTTTTTTTTTTTGTCCTTTTTTTTCTCCAATCTCAGAAATAAAAAAAGTTTCTTCCCGACACTCCCATTTGATCGGAGGGCTTCGACATTGGTGGGCTCTGTTTCGCCGCTCCGGCTAAAAGTTAGTGTAAAGCAAAAATGGAACGGTACGGTGGCGCCGGAGAAGATGAGTCACGGTCGGATCCATCACATGAATGGTCCGCTCAAGGAACCGAAACTGGTATCGAAGCTTCGATGTGGCGGTTAGGGTTGCGAGGTGGTGGAGGTGGAGGTGAAACGTTCCCGGAGCGACCCGATGAACCCGATTGTATCTATTATTTACGAACCGGTGTTTGCGGGTACGGGTCTCGATGTCGGTTCAATCACCCACGAAACCGTGCTCCGGTCTTGGGAGGTCTCAGAACAGAAGCTGGAGAGTTCCCTGAGAGAATGGGACAACCTGTTTGTCAGCATTTCATGCGAACAGGAACATGTAAATTTGGTGCTTCTTGTAAGTATCACCATCCTAGACAAGGAGGAGGAGGAGATTCTGTTACTCCTGTCTCCCTAAATTACATGGGATTCCCATTACGCCCGGGGGAGAAAGAATGCTCCTATTTCATGAGAACCGGTCAGTGTAAATTCGGTTCCACCTGTCGATATCACCATCCAGTCCCTCCTGGTGTACAAGCTCCATCTCAGCAGCAGCAACAACAGTTATCCGCTGGTCCAACTATGTATCCATCGCTTCAGTCTCAAACCGTTCCTTCATCGCAGCAATACGGAGTAGTTCTAGCAAGACCTCAGCTCTTACCAGGCTCATATGTTCAAAGCCCTTATGGTTACGGTCAAATGGTTCTTCCTCCTGGTATGGTTCCATACTCGGGCTGGAACCCTTACCAGGCTTCTGTAAGTGCGATGCCTTCCCCTGGGACTCAACCGTCAATGGGAACCAGCTCTGTTTATGGAATCACTCCGTTATCTCCCTCAGCGCCTGCTTATCAATCCGGTCCATCTTCTACCGGTGTTTCAAATAAGGAACAAACTTTTCCTCAGCGACCTGAACAACCTGAGTGTCAATACTTTATGAGAACCGGAGATTGTAAATTCGGAACCTCTTGCAGATTCCATCATCCTATGGAAGCAGCATCGCCAGAGGCAAGTACCCTCAGCCACATTGGCCTCCCACTTCGTCCCGGCGCAGTGCCATGCACTCACTTTGCGCAACACGGTATTTGCAAGTTTGGGCCTGCCTGCAAATTTGACCACTCCTTGGGCTCTTCTTCACTAAGCTACAGCCCATCCCCTTCTTCACTCACGGACATGCCCGTCGCACCTTACCCCTCCTCGCTCGGCACATTAGCTCCATCATCCTCATCTGACCAATGCACTGAGCTTATCTCTTCCAGCTCTATTGAACCTATAACAACAACAACTGGTGGCTCAGAAACTGTGGCTGCTGGAGTCTCTTCTATGACCAGTGATGTGAGCCATCCCGAGCCTGCTGAGACCAATAAAGGAACATAAAAAGGATATTTTTTGGGTGGAGAGACAACAACAGAAAGCAAAGCAGAGAGATAGACGAAAGGAGTTCTCTCTACTCTTCTATGTCATGTCTCTCCTCTTAGGTCTCTCTTACCATGTTCATATTATTCCTTCATACGGCCATCTCTCTGTCTTTTGTTCTTCTTTTTCTTTTTGGAAACGATGATTAATAAATGGCCTTATATATTCACAAAAATCCCCTGTTTATTTTTAAAACTTTATGGAATATGGGAATTAACTAATTAATAGTCCAATTTTTAT
- >AT5G18550.3 GAAAGATCAAAACTTCCCCATCCCTCTTCCAAAATCCATCCCCTCAAAAAAAATAAAAATACTTCCTTTCGAAATTTCGCTAAAAAAAAAAATCGAAGCCGAAAACAAATAGTAGAAGAAAGAAAAAAGTTTCAGCTTTAAGGAAAGAGATCAAGCGACTGAGAGTGGTGTGGAGACAGAACCAACCACGATCTGTGGTTTTTTTTTTTTTGTCCTTTTTTTTCTCCAATCTCAGAAATAAAAAAAGTTTCTTCCCGACACTCCCATTTGATCGGAGGGCTTCGACATTGGTGGGCTCTGTTTCGCCGCTCCGGCTAAAAGTTAGTGTAAAGCAAAAATGGAACGGTACGGTGGCGCCGGAGAAGATGAGTCACGGTCGGATCCATCACATGAATGGTCCGCTCAAGGAACCGAAACTGGTATCGAAGCTTCGATGTGGCGGTTAGGGTTGCGAGGTGGTGGAGGTGGAGGTGAAACGTTCCCGGAGCGACCCGATGAACCCGATTGTATCTATTATTTACGAACCGGTGTTTGCGGGTACGGGTCTCGATGTCGGTTCAATCACCCACGAAACCGTGCTCCGGTCTTGGGAGGTCTCAGAACAGAAGCTGGAGAGTTCCCTGAGAGAATGGGACAACCTGTTTGTCAGCATTTCATGCGAACAGGAACATGTAAATTTGGTGCTTCTTGTAAGTATCACCATCCTAGACAAGGAGGAGGAGGAGATTCTGTTACTCCTGTCTCCCTAAATTACATGGGATTCCCATTACGCCCGGGGGAGAAAGAATGCTCCTATTTCATGAGAACCGGTCAGTGTAAATTCGGTTCCACCTGTCGATATCACCATCCAGTCCCTCCTGGTGTACAAGCTCCATCTCAGCAGCAGCAACAACAGTTATCCGCTGGTCCAACTATGTATCCATCGCTTCAGTCTCAAACCGTTCCTTCATCGCAGCAATACGGAGTAGTTCTAGCAAGACCTCAGCTCTTACCAGGCTCATATGTTCAAAGCCCTTATGGTTACGGTCAAATGGTTCTTCCTCCTGGTATGGTTCCATACTCGGGCTGGAACCCTTACCAGGCTTCTGTAAGTGCGATGCCTTCCCCTGGGACTCAACCGTCAATGGGAACCAGCTCTGTTTATGGAATCACTCCGTTATCTCCCTCAGCGCCTGCTTATCAATCCGGTCCATCTTCTACCGGTGTTTCAAATAAGGAACAAACTTTTCCTCAGCGACCTGAACAACCTGAGTGTCAATACTTTATGAGAACCGGAGATTGTAAATTCGGAACCTCTTGCAGATTCCATCATCCTATGGAAGCAGCATCGCCAGAGGCAAGTACCCTCAGCCACATTGGCCTCCCACTTCGTCCCGGCGCAGTGCCATGCACTCACTTTGCGCAACACGGTATTTGCAAGTTTGGGCCTGCCTGCAAATTTGACCACTCCTTGGGCTCTTCTTCACTAAGCTACAGCCCATCCCCTTCTTCACTCACGGACATGCCCGTCGCACCTTACCCCTCCTCGCTCGGCACATTAGCTCCATCATCCTCATCTGACCAATGCACTGAGCTTATCTCTTCCAGCTCTATTGAACCTATAACAACAACAACTGGTGGCTCAGAAACTGTGGCTGCTGGAGTCTCTTCTATGACCAGTGATGTGAGCCATCCCGAGCCTGCTGAGACCAATAAAGGAACATAAAAAGGATATTTTTTGGGTGGAGAGACAACAACAGAAAGCAAAGCAGAGAGATAGACGAAAGGAGTTCTCTCTACTCTTCTATGTCATGTCTCTCCTCTTAGGTCTCTCTTACCATGTTCATATTATTCCTTCATACGGCCATCTCTCTGTCTTTTGTTCTTCTTTTTCTTTTTGGAAACGATGATTAATAAATGGCCTTATATATTCACAAAAATCCCCTGTTTATTTTTAAAACTTTATGGAATATGGGAATTAACTAATTAATAGTCCAATTTTTAT
CDS Sequence
Protein Sequence