Gene Details:
- Gene ID: AT5G18820
- Gene Symbol: CPN60a2, Cpn60alpha2, CPNA2, EMB3007
- Gene Name: chaperonin-60alpha2, embryo defective 3007
- Description: TCP-1/cpn60 chaperonin family protein;(source:Araport11)
- TAIR Accession: locus:2144955
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0005524 — enables — ATP binding
- GO:0005737 — located in — cytoplasm
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0042026 — involved in — protein refolding
Germplasm Phenotype:
- CS24355 — embryo defective; developmental arrest of mutant embryos occurs at globular stage.
- cpna2-2 — Heterozygotes produce ca. 25% aborted embryos that arrest at the globular stage. TEM studies show that the abnormal chloroplasts are defective.
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- A chaperonin subunit with unique structures is essential for folding of a specific substrate. DOI: 10.1371/journal.pbio.1001040 ; PMID: 21483722
- Molecular foundations of reproductive lethality in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0028398 ; PMID: 22164284
- Functional divergence of chloroplast Cpn60α subunits during Arabidopsis embryo development. DOI: 10.1371/journal.pgen.1007036 ; PMID: 28961247
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Embryonic Photosynthesis Affects Post-Germination Plant Growth. DOI: 10.1104/pp.20.00043 ; PMID: 32060052
Sequence:
cDNA Sequence
- >AT5G18820.3 CTCGTACCTTGACTCGTCCGGTTCCAAAAACTCGGTCACCCAAAAATAAAAATCAAAACCCTTCGATAAACCTCCCGGAGGAGAGGAGACACCCGAAATGTTCGCCGTATCACCGTCGTCATTCTCGCCGACAACCATTTCTCCGCGCCGTAGTGGACAGAGGAACGAACCTCGAAAATTCTCGGTGGTGAGAGCTGGAGCTAAGAGAATACTATACGGTAAAGATAGCAGAGAGAAACTCCAAGCCGGAATCGATAAGTTAGCTGATGCTGTTTCCATCACCTTAGGCCCTAGAGGGCGTAATGTAGTGCTTGCTGAAAAAGATACAATCAAAGTGATTAACGATGGTGTCACCATTGCTAAATCTATTGAGCTTCCTGACACTATTGAGAACGCTGGAGCAACATTAATCCAAGAGGTTGCGATTAAAATGAACGAATCAGCGGGTGACGGGACAACCACTGCAATCATTTTGGCTAGAGAAATGATCAAAGCTGGTTCTTTGGCTATTGCTTTTGGAGCTAATGCTGTTTCTGTGAAGAATGGAATGAATAAGACTGTTAAAGAGTTGGTCAGGGTGTTGCAGATGAAAAGTATTCCTGTTCAAGGGAAGAATGATATTAAAGCTGTGGCTTCAATCTCTGCTGGTAACGATGAATTTGTGGGGAATTTGATTGCTGAGACTGTGGAAAAGATTGGCCCTGATGGTGTCATCTCCATTGAATCATCTTCCACTTCAGAAACGTCTGTTATAGTTGAGGAAGGAATGAAGTTTGACAAGGGCTATATGTCGCCTCATTTCATCACAAATCAGGAGAAATCTACGGTGGAATTCGACAAAGCTAAAATTCTTGTGACGGATCAGAAAATCACTTCAGCCAAAGAATTAGTTCCGTTACTGGAGAAAACCTCACAACTGAGTGTTCCGCTCCTTATAATTGCAGAAGATATCTCTGCGGAAGTGCTTGAGATACTGGTGGTGAACAAGAAGCAAGGTTTGATCAATGTCGCAGTTGTGAAATGTCCAGGAATGTTGGATGGGAAAAAGGCTTTGCTACAAGACATTGCACTCATGACAGGAGCTGATTATCTTTCCGGAGATTTAGGCATGTCGCTCATGGGTGCAACTTCAGATCAGCTGGGTGTTTCTCGTAGAGTAGTAATTACAGCTAATTCAACAACTATAGTCGCAGACGCTTCTACTAAACCAGAGATTCAGGCAAGAATTGCTCAGATGAAGAAGGATCTAGCTGAGACAGATAATTCATATCTTTCAAAAAAAATAGCAGAGAGAATTGCTAAGCTCACAGGAGGCGTGGCTGTAATAAAGGTCCGATTTTACAATAACCCATTCTTTGTTTATAATATGCTGCGACAACTTGGGCTTTCATCAGAACATAATTTCTACCTAAGTTGGAGGCCACACTGAAACAGAACTTGAGGACAGAAAACTAAGAATAGAGGACGCGAAGAATGCTACATTTGCAGCCATGAGAGAAGGTATAGTTCCAGGTGGTGGTGCTACTTATATCCATCTTTTAGATGAGATACCGAGAATCAAGAAGAATCTAATGGAAGATTCATACGAACAAATAGGTGCAGATATTGTAGCAATGGCACTCACTGCACCTGCAATGGCCATAGCAACCAATGCTGGGGTTGATGGATCAGTTGTGGTGCAGAAAACCAGAGAACTCGAATGGAGAAGTGGTTACAACGCAATGTCTGGAAAGTATGAGGATCTTCTAAACGCTGGAATCGCAGATCCTTGTCGGGTTTCAAGATTCGCCCTTCAAAACGCAGTTTCCGTTGCCGGCATTATTCTCACAACTCAAGCAGTACTCGTGGAGAAGATCAAGCAACCTAAACCTGCTGTTCCTCAAGTTCCTGGCATACCCACATCATAACCAACCACCACCAAAGGTAACAAAGAAGCACAAAAACCAAACTCTCTACTGCAGATTTTGTCAGAATCTAAACCTTTGCTCACAAAGTGGTGTTTAATCTTGTTGTGTTTTAACTAAACATTAGAATCTGTGATGCAATGGTATGTGCAGAGTGAAAGAAAAAAAAGATTGTTGGAATCATTGTTGCTTATTGTGTTAGCTAAGCTAGTAGTTAGCCTCAAATTTCGGAGAAAGCAAGAAAATGCCTTGTAATGCAAGATTCTTACGCTGTAAGCCCTAGTTGAATGTGTATACGGACATCTTTTATATTATTTTCTTTTGTCAGTTTTGTGCTTAGAAAGCGTCATCAAGTCTCAATTATTATGCAATTTCATCTTATTAAACTTTTGTAGCCTATGTGGTTATGTCGAG
- >AT5G18820.1 CTCGTACCTTGACTCGTCCGGTTCCAAAAACTCGGTCACCCAAAAATAAAAATCAAAACCCTTCGATAAACCTCCCGGAGGAGAGGAGACACCCGAAATGTTCGCCGTATCACCGTCGTCATTCTCGCCGACAACCATTTCTCCGCGCCGTAGTGGACAGAGGAACGAACCTCGAAAATTCTCGGTGGTGAGAGCTGGAGCTAAGAGAATACTATACGGTAAAGATAGCAGAGAGAAACTCCAAGCCGGAATCGATAAGTTAGCTGATGCTGTTTCCATCACCTTAGGCCCTAGAGGGCGTAATGTAGTGCTTGCTGAAAAAGATACAATCAAAGTGATTAACGATGGTGTCACCATTGCTAAATCTATTGAGCTTCCTGACACTATTGAGAACGCTGGAGCAACATTAATCCAAGAGGTTGCGATTAAAATGAACGAATCAGCGGGTGACGGGACAACCACTGCAATCATTTTGGCTAGAGAAATGATCAAAGCTGGTTCTTTGGCTATTGCTTTTGGAGCTAATGCTGTTTCTGTGAAGAATGGAATGAATAAGACTGTTAAAGAGTTGGTCAGGGTGTTGCAGATGAAAAGTATTCCTGTTCAAGGGAAGAATGATATTAAAGCTGTGGCTTCAATCTCTGCTGGTAACGATGAATTTGTGGGGAATTTGATTGCTGAGACTGTGGAAAAGATTGGCCCTGATGGTGTCATCTCCATTGAATCATCTTCCACTTCAGAAACGTCTGTTATAGTTGAGGAAGGAATGAAGTTTGACAAGGGCTATATGTCGCCTCATTTCATCACAAATCAGGAGAAATCTACGGTGGAATTCGACAAAGCTAAAATTCTTGTGACGGATCAGAAAATCACTTCAGCCAAAGAATTAGTTCCGTTACTGGAGAAAACCTCACAACTGAGTGTTCCGCTCCTTATAATTGCAGAAGATATCTCTGCGGAAGTGCTTGAGATACTGGTGGTGAACAAGAAGCAAGGTTTGATCAATGTCGCAGTTGTGAAATGTCCAGGAATGTTGGATGGGAAAAAGGCTTTGCTACAAGACATTGCACTCATGACAGGAGCTGATTATCTTTCCGGAGATTTAGGCATGTCGCTCATGGGTGCAACTTCAGATCAGCTGGGTGTTTCTCGTAGAGTAGTAATTACAGCTAATTCAACAACTATAGTCGCAGACGCTTCTACTAAACCAGAGATTCAGGCAAGAATTGCTCAGATGAAGAAGGATCTAGCTGAGACAGATAATTCATATCTTTCAAAAAAAATAGCAGAGAGAATTGCTAAGCTCACAGGAGGCGTGGCTGTAATAAAGGTCCGATTTTACAATAACCCATTCTTTGTTTATAATATGCTGCGACAACTTGGGCTTTCATCAGAACATAATTTCTACCTAAGTTGGAGGCCACACTGAAACAGAACTTGAGGACAGAAAACTAAGAATAGAGGACGCGAAGAATGCTACATTTGCAGCCATGAGAGAAGGTATAGTTCCAGGTGGTGGTGCTACTTATATCCATCTTTTAGATGAGATACCGAGAATCAAGAAGAATCTAATGGAAGATTCATACGAACAAATAGGTGCAGATATTGTAGCAATGGCACTCACTGCACCTGCAATGGCCATAGCAACCAATGCTGGGGTTGATGGATCAGTTGTGGTGCAGAAAACCAGAGAACTCGAATGGAGAAGTGGTTACAACGCAATGTCTGGAAAGTATGAGGATCTTCTAAACGCTGGAATCGCAGATCCTTGTCGGGTTTCAAGATTCGCCCTTCAAAACGCAGTTTCCGTTGCCGGCATTATTCTCACAACTCAAGCAGTACTCGTGGAGAAGATCAAGCAACCTAAACCTGCTGTTCCTCAAGTTCCTGGCATACCCACATCATAACCAACCACCACCAAAGGTAACAAAGAAGCACAAAAACCAAACTCTCTACTGCAGATTTTGTCAGAATCTAAACCTTTGCTCACAAAGTGGTGTTTAATCTTGTTGTGTTTTAACTAAACATTAGAATCTGTGATGCAATGGTATGTGCAGAGTGAAAGAAAAAAAAGATTGTTGGAATCATTGTTGCTTATTGTGTTAGCTAAGCTAGTAGTTAGCCTCAAATTTCGGAGAAAGCAAGAAAATGCCTTGTAATGCAAGATTCTTACGCTGTAAGCCCTAGTTGAATGTGTATACGGACATCTTTTATATTATTTTCTTTTGTCAGTTTTGTGCTTAGAAAGCGTCATCAAGTCTCAATTATTATGCAATTTCATCTTATTAAACTTTTGTAGCCTATGTGGTTATGTCGAG
- >AT5G18820.2 CTCGTACCTTGACTCGTCCGGTTCCAAAAACTCGGTCACCCAAAAATAAAAATCAAAACCCTTCGATAAACCTCCCGGAGGAGAGGAGACACCCGAAATGTTCGCCGTATCACCGTCGTCATTCTCGCCGACAACCATTTCTCCGCGCCGTAGTGGACAGAGGAACGAACCTCGAAAATTCTCGGTGGTGAGAGCTGGAGCTAAGAGAATACTATACGGTAAAGATAGCAGAGAGAAACTCCAAGCCGGAATCGATAAGTTAGCTGATGCTGTTTCCATCACCTTAGGCCCTAGAGGGCGTAATGTAGTGCTTGCTGAAAAAGATACAATCAAAGTGATTAACGATGGTGTCACCATTGCTAAATCTATTGAGCTTCCTGACACTATTGAGAACGCTGGAGCAACATTAATCCAAGAGGTTGCGATTAAAATGAACGAATCAGCGGGTGACGGGACAACCACTGCAATCATTTTGGCTAGAGAAATGATCAAAGCTGGTTCTTTGGCTATTGCTTTTGGAGCTAATGCTGTTTCTGTGAAGAATGGAATGAATAAGACTGTTAAAGAGTTGGTCAGGGTGTTGCAGATGAAAAGTATTCCTGTTCAAGGGAAGAATGATATTAAAGCTGTGGCTTCAATCTCTGCTGGTAACGATGAATTTGTGGGGAATTTGATTGCTGAGACTGTGGAAAAGATTGGCCCTGATGGTGTCATCTCCATTGAATCATCTTCCACTTCAGAAACGTCTGTTATAGTTGAGGAAGGAATGAAGTTTGACAAGGGCTATATGTCGCCTCATTTCATCACAAATCAGGAGAAATCTACGGTGGAATTCGACAAAGCTAAAATTCTTGTGACGGATCAGAAAATCACTTCAGCCAAAGAATTAGTTCCGTTACTGGAGAAAACCTCACAACTGAGTGTTCCGCTCCTTATAATTGCAGAAGATATCTCTGCGGAAGTGCTTGAGATACTGGTGGTGAACAAGAAGCAAGGTTTGATCAATGTCGCAGTTGTGAAATGTCCAGGAATGTTGGATGGGAAAAAGGCTTTGCTACAAGACATTGCACTCATGACAGGAGCTGATTATCTTTCCGGAGATTTAGGCATGTCGCTCATGGGTGCAACTTCAGATCAGCTGGGTGTTTCTCGTAGAGTAGTAATTACAGCTAATTCAACAACTATAGTCGCAGACGCTTCTACTAAACCAGAGATTCAGGCAAGAATTGCTCAGATGAAGAAGGATCTAGCTGAGACAGATAATTCATATCTTTCAAAAAAAATAGCAGAGAGAATTGCTAAGCTCACAGGAGGCGTGGCTGTAATAAAGGTCCGATTTTACAATAACCCATTCTTTGTTTATAATATGCTGCGACAACTTGGGCTTTCATCAGAACATAATTTCTACCTAAGTTGGAGGCCACACTGAAACAGAACTTGAGGACAGAAAACTAAGAATAGAGGACGCGAAGAATGCTACATTTGCAGCCATGAGAGAAGGTATAGTTCCAGGTGGTGGTGCTACTTATATCCATCTTTTAGATGAGATACCGAGAATCAAGAAGAATCTAATGGAAGATTCATACGAACAAATAGGTGCAGATATTGTAGCAATGGCACTCACTGCACCTGCAATGGCCATAGCAACCAATGCTGGGGTTGATGGATCAGTTGTGGTGCAGAAAACCAGAGAACTCGAATGGAGAAGTGGTTACAACGCAATGTCTGGAAAGTATGAGGATCTTCTAAACGCTGGAATCGCAGATCCTTGTCGGGTTTCAAGATTCGCCCTTCAAAACGCAGTTTCCGTTGCCGGCATTATTCTCACAACTCAAGCAGTACTCGTGGAGAAGATCAAGCAACCTAAACCTGCTGTTCCTCAAGTTCCTGGCATACCCACATCATAACCAACCACCACCAAAGGTAACAAAGAAGCACAAAAACCAAACTCTCTACTGCAGATTTTGTCAGAATCTAAACCTTTGCTCACAAAGTGGTGTTTAATCTTGTTGTGTTTTAACTAAACATTAGAATCTGTGATGCAATGGTATGTGCAGAGTGAAAGAAAAAAAAGATTGTTGGAATCATTGTTGCTTATTGTGTTAGCTAAGCTAGTAGTTAGCCTCAAATTTCGGAGAAAGCAAGAAAATGCCTTGTAATGCAAGATTCTTACGCTGTAAGCCCTAGTTGAATGTGTATACGGACATCTTTTATATTATTTTCTTTTGTCAGTTTTGTGCTTAGAAAGCGTCATCAAGTCTCAATTATTATGCAATTTCATCTTATTAAACTTTTGTAGCCTATGTGGTTATGTCGAG
CDS Sequence
Protein Sequence