Gene Details:

• Gene ID: AT5G19350
• Gene Symbol: RBP45d
• Gene Name:
• Description: RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)
• TAIR Accession: locus:2150215
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G19350.1     AT5G19350.2

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

Gene Ontology:

• GO:0005829  — is active in — cytosol
• GO:0008143  — enables — poly(A) binding
• GO:0048573  — acts upstream of or within — photoperiodism, flowering
• GO:0005634  — located in — nucleus
• GO:0003729  — enables — mRNA binding
• GO:0003723  — enables — RNA binding
• GO:0034605  — involved in — cellular response to heat
• GO:0031047  — acts upstream of or within — regulatory ncRNA-mediated gene silencing
• GO:0005685  — located in — U1 snRNP
• GO:0000398  — acts upstream of or within — mRNA splicing, via spliceosome
• GO:0010494  — located in — cytoplasmic stress granule
• GO:0005515  — enables — protein binding
• GO:0005737  — located in — cytoplasm

Germplasm Phenotype:

• CS72358  — hyper-GFP phenotype; strong GFP expression compared to wild-type Target line (CS69640)
• CS72359  — hyper-GFP phenotype; strong GFP expression compared to wild-type Target line (CS69640)

Function-related keywords:

• root ,  plant sperm cell

Literature:

• RBP45 and RBP47, two oligouridylate-specific hnRNP-like proteins interacting with poly(A)+ RNA in nuclei of plant cells.   DOI:  10.1017/s1355838200001163 ;  PMID:  11105760
• Phylogenetic and expression analysis of RNA-binding proteins with triple RNA recognition motifs in plants.   DOI:  10.1007/s10059-011-0001-2 ;  PMID:  21120628
• A Collection of Pre-mRNA Splicing Mutants in Arabidopsis thaliana.   DOI:  10.1534/g3.119.400998 ;  PMID:  32265287
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669
• The U1 snRNP component RBP45d regulates temperature-responsive flowering in Arabidopsis.   DOI:  10.1093/plcell/koab273 ;  PMID:  34791475
• The RNA-binding protein RBP45D of Arabidopsis promotes transgene silencing and flowering time.   DOI:  10.1111/tpj.15637 ;  PMID:  34919766
• A genetic screen in Arabidopsis reveals the identical roles for RBP45d and PRP39a in 5' cryptic splice site selection.   DOI:  10.3389/fpls.2022.1086506 ;  PMID:  36618610
• RBP45 and RBP47, two oligouridylate-specific hnRNP-like proteins interacting with poly(A)+ RNA in nuclei of plant cells.   DOI:  10.1017/s1355838200001163 ;  PMID:  11105760

Sequence: