Gene Details:

• Gene ID: AT5G20420
• Gene Symbol: CHR42, CLSY2
• Gene Name: chromatin remodeling 42, CLASSY2
• Description: chromatin remodeling 42;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G20420.1

Germplasm Phenotype:

• clsy1-7 clsy2-2  — synergistic relationship resulting in stronger reductions in 24nt-siRNA levels, effects on differentially methylated regions where methylation level reductions were observed in non-CG contexts in a genotype-specific manner.
• clsy1-7 clsy2-2 clsy3-1 clsy4-1  — greater than 98% of all pol-iv-dependent 24nt-siRNA clusters were reduced, effects on differentially methylated regions where methylation level reductions were observed in non-CG contexts in a genotype-specific manner.

Literature:

• Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation.   DOI:  10.1016/j.cub.2004.04.037 ;  PMID:  15120073
• A transcriptome-based characterization of habituation in plant tissue culture.   DOI:  10.1104/pp.105.076059 ;  PMID:  16489130
• An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis.   DOI:  10.1105/tpc.107.051540 ;  PMID:  17526749
• Locus-specific control of the de novo DNA methylation pathway in Arabidopsis by the CLASSY family.   DOI:  10.1038/s41588-018-0115-y ;  PMID:  29736015
• The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis.   DOI:  10.1038/s41467-021-27690-x ;  PMID:  35017514

Sequence: